RNA–Protein interactions for RNA: ENST00000639715.1

SCARB2-218, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-218ENST00000639715 BMT2Q1RMZ1 405 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 GALNTL6Q49A17 601 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 DNAL1Q4LDG9 190 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 PERM1Q5SV97 790 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 SNRNP48Q6IEG0 339 aaKnown RBP5.88□□□□□ -1.47
SCARB2-218ENST00000639715 APOBEC3HQ6NTF7 200 aaKnown RBP5.88□□□□□ -1.47
SCARB2-218ENST00000639715 RSBN1LQ6PCB5 846 aaPredicted RBP5.88□□□□□ -1.47
SCARB2-218ENST00000639715 DARS2Q6PI48 645 aaKnown RBP5.88□□□□□ -1.47
SCARB2-218ENST00000639715 OTOP1Q7RTM1 612 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 NIPA1Q7RTP0 329 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 NKX2-3Q8TAU0 364 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 GAB3Q8WWW8 586 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 SLC5A5Q92911 643 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 CGREF1Q99674 301 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 ACAD9Q9H845 621 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 ALG13Q9NP73 1137 aaKnown RBP5.88□□□□□ -1.47
SCARB2-218ENST00000639715 DDX4Q9NQI0 724 aaKnown RBP5.88□□□□□ -1.47
SCARB2-218ENST00000639715 SAR1AQ9NR31 198 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 FKBP14Q9NWM8 211 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 WHRNQ9P202 907 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 NXF1Q9UBU9 619 aaKnown RBP5.88□□□□□ -1.47
SCARB2-218ENST00000639715 CAB39Q9Y376 341 aaPredicted RBP5.88□□□□□ -1.47
SCARB2-218ENST00000639715 FRMPD4Q14CM0 1322 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 IGSF9BQ9UPX0 1349 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 USP54Q70EL1 1684 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 N4BP2Q86UW6 1770 aaPredicted RBP5.88□□□□□ -1.47
SCARB2-218ENST00000639715 ZNF839A8K0R7 811 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 GSC2O15499 205 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 GUCY1B2O75343 617 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 CCNB1P14635 433 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 TCEA1P23193 301 aaKnown RBP5.88□□□□□ -1.47
SCARB2-218ENST00000639715 EEF1B2P24534 225 aaKnown RBP5.88□□□□□ -1.47
SCARB2-218ENST00000639715 ST13P50502 369 aaKnown RBP5.88□□□□□ -1.47
SCARB2-218ENST00000639715 GRIK5Q16478 980 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 DUOXA2Q1HG44 320 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 WDR72Q3MJ13 1102 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 ZNF618Q5T7W0 954 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 FRA10AC1Q70Z53 315 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 AFAP1L2Q8N4X5 818 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 HELQQ8TDG4 1101 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 PYDC1Q8WXC3 89 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 NACC2Q96BF6 587 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 CALN1Q9BXU9 219 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 MRPL4Q9BYD3 311 aaKnown RBP5.88□□□□□ -1.47
SCARB2-218ENST00000639715 OSBPL8Q9BZF1 889 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 GBA3Q9H227 469 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 KCTD10Q9H3F6 313 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 JPH1Q9HDC5 661 aaPredicted RBP5.88□□□□□ -1.47
SCARB2-218ENST00000639715 ZNRF3Q9ULT6 936 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 TBX20Q9UMR3 447 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 THSD7BQ9C0I4 1608 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 DDTLA6NHG4 134 aaPredicted RBP5.88□□□□□ -1.47
SCARB2-218ENST00000639715 ZBBXA8MT70 800 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 TTC34A8MYJ7 566 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.88□□□□□ -1.47
SCARB2-218ENST00000639715 FAM47E-STBD1D6RA91 191 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 FAM86B1E9PN63 330 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 PIK3CDO00329 1044 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 SORBS3O60504 671 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 SERPINB7O75635 380 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 SLITRK3O94933 977 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 NR3C2P08235 984 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 FAM86B2P0C5J1 330 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 ITGA4P13612 1032 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 GARTP22102 1010 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 BDNFP23560 247 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 GARSP41250 739 aaKnown RBP5.88□□□□□ -1.47
SCARB2-218ENST00000639715 HIRAP54198 1017 aaPredicted RBP5.88□□□□□ -1.47
SCARB2-218ENST00000639715 NCKAP1LP55160 1127 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 CDC16Q13042 620 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 SPP2Q13103 211 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 PPP6R3Q5H9R7 873 aaPredicted RBP5.88□□□□□ -1.47
SCARB2-218ENST00000639715 ATG16L1Q676U5 607 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 GRAMD2AQ8IUY3 354 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 SPERTQ8NA61 448 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 PSPC1Q8WXF1 523 aaKnown RBP5.88□□□□□ -1.47
SCARB2-218ENST00000639715 TRIM63Q969Q1 353 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 FAM136AQ96C01 138 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 GPRASP2Q96D09 838 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 WNK4Q96J92 1243 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 INPP4AQ96PE3 977 aaPredicted RBP5.88□□□□□ -1.47
SCARB2-218ENST00000639715 CITED4Q96RK1 184 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 SLX1AQ9BQ83 275 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 SENP7Q9BQF6 1050 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 ZNF304Q9HCX3 659 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 WDR6Q9NNW5 1121 aaKnown RBP5.88□□□□□ -1.47
SCARB2-218ENST00000639715 ASNSD1Q9NWL6 643 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 ATF5Q9Y2D1 282 aaPredicted RBP5.88□□□□□ -1.47
SCARB2-218ENST00000639715 LAMB4A4D0S4 1761 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 GOLGA8QA0A0J9YX86 632 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 GOLGA8OA6NCC3 632 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 TBKBP1A7MCY6 615 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 E9PBE3 544 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 GOLGA8NF8WBI6 632 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 H3BSA7 217 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 GOLGA8RI6L899 631 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 PSMD11O00231 422 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 EXTL3O43909 919 aa5.88□□□□□ -1.47
SCARB2-218ENST00000639715 FARP2O94887 1054 aaPredicted RBP5.88□□□□□ -1.47
SCARB2-218ENST00000639715 STMN1P16949 149 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms