RNA–Protein interactions for RNA: ENST00000637485.1

CACNA1A-242, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 5,481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-242ENST00000637485 COMMD9Q9P000 198 aa10.01□□□□□ -0.81
CACNA1A-242ENST00000637485 SLC12A4Q9UP95 1085 aa10.01□□□□□ -0.81
CACNA1A-242ENST00000637485 SF3B1O75533 1304 aaKnown RBP eCLIP10.01□□□□□ -0.81
CACNA1A-242ENST00000637485 FLT1P17948 1338 aa10.01□□□□□ -0.81
CACNA1A-242ENST00000637485 CCDC189A1A4V9 331 aa10.01□□□□□ -0.81
CACNA1A-242ENST00000637485 TNPO2O14787 897 aaKnown RBP10.01□□□□□ -0.81
CACNA1A-242ENST00000637485 TDP2O95551 362 aa10.01□□□□□ -0.81
CACNA1A-242ENST00000637485 EYA4O95677 639 aa10.01□□□□□ -0.81
CACNA1A-242ENST00000637485 RARGP13631 454 aa10.01□□□□□ -0.81
CACNA1A-242ENST00000637485 AQP5P55064 265 aa10.01□□□□□ -0.81
CACNA1A-242ENST00000637485 PSMC5P62195 406 aa10.01□□□□□ -0.81
CACNA1A-242ENST00000637485 XIAPP98170 497 aa10.01□□□□□ -0.81
CACNA1A-242ENST00000637485 LPIN1Q14693 890 aa10.01□□□□□ -0.81
CACNA1A-242ENST00000637485 TSNQ15631 228 aaKnown RBP10.01□□□□□ -0.81
CACNA1A-242ENST00000637485 SPDYAQ5MJ70 313 aa10.01□□□□□ -0.81
CACNA1A-242ENST00000637485 LMBRD2Q68DH5 695 aaPredicted RBP10.01□□□□□ -0.81
CACNA1A-242ENST00000637485 C16orf86Q6ZW13 317 aa10.01□□□□□ -0.81
CACNA1A-242ENST00000637485 TMEM110Q86TL2 294 aa10.01□□□□□ -0.81
CACNA1A-242ENST00000637485 DEFB107AQ8IZN7 70 aa10.01□□□□□ -0.81
CACNA1A-242ENST00000637485 SLC35G2Q8TBE7 412 aa10.01□□□□□ -0.81
CACNA1A-242ENST00000637485 APBB2Q92870 758 aa10.01□□□□□ -0.81
CACNA1A-242ENST00000637485 ATXN7L3BQ96GX2 97 aa10.01□□□□□ -0.81
CACNA1A-242ENST00000637485 FAM111AQ96PZ2 611 aa10.01□□□□□ -0.81
CACNA1A-242ENST00000637485 MMTAG2Q9BU76 263 aaKnown RBP10.01□□□□□ -0.81
CACNA1A-242ENST00000637485 SARS2Q9NP81 518 aaKnown RBP10.01□□□□□ -0.81
CACNA1A-242ENST00000637485 TRNAU1APQ9NX07 287 aaKnown RBP10.01□□□□□ -0.81
CACNA1A-242ENST00000637485 KDM6AO15550 1401 aaPredicted RBP10.01□□□□□ -0.81
CACNA1A-242ENST00000637485 UBA6A0AVT1 1052 aaPredicted RBP10.01□□□□□ -0.81
CACNA1A-242ENST00000637485 PDXKO00764 312 aa10.01□□□□□ -0.81
CACNA1A-242ENST00000637485 CCNKO75909 580 aa10.01□□□□□ -0.81
CACNA1A-242ENST00000637485 EPHB2P29323 1055 aa10.01□□□□□ -0.81
CACNA1A-242ENST00000637485 PTDSS1P48651 473 aaKnown RBP10.01□□□□□ -0.81
CACNA1A-242ENST00000637485 POLD3Q15054 466 aaPredicted RBP10.01□□□□□ -0.81
CACNA1A-242ENST00000637485 SLC5A9Q2M3M2 681 aa10.01□□□□□ -0.81
CACNA1A-242ENST00000637485 SPOUT1Q5T280 376 aaKnown RBP10.01□□□□□ -0.81
CACNA1A-242ENST00000637485 STRIP1Q5VSL9 837 aa10.01□□□□□ -0.81
CACNA1A-242ENST00000637485 TTC23LQ6PF05 361 aa10.01□□□□□ -0.81
CACNA1A-242ENST00000637485 EXOC3L1Q86VI1 746 aa10.01□□□□□ -0.81
CACNA1A-242ENST00000637485 KBTBD8Q8NFY9 601 aa10.01□□□□□ -0.81
CACNA1A-242ENST00000637485 SHCBP1LQ9BZQ2 653 aa10.01□□□□□ -0.81
CACNA1A-242ENST00000637485 KRCC1Q9NPI7 259 aaPredicted RBP10.01□□□□□ -0.81
CACNA1A-242ENST00000637485 RAB21Q9UL25 225 aa10.01□□□□□ -0.81
CACNA1A-242ENST00000637485 ARHGEF28Q8N1W1 1705 aaKnown RBP10.01□□□□□ -0.81
CACNA1A-242ENST00000637485 FARP2O94887 1054 aaPredicted RBP10.01□□□□□ -0.81
CACNA1A-242ENST00000637485 RTN3O95197 1032 aaPredicted RBP10.01□□□□□ -0.81
CACNA1A-242ENST00000637485 CDC25CP30307 473 aa10.01□□□□□ -0.81
CACNA1A-242ENST00000637485 IST1P53990 364 aa10.01□□□□□ -0.81
CACNA1A-242ENST00000637485 VBP1P61758 197 aa10.01□□□□□ -0.81
CACNA1A-242ENST00000637485 ZC2HC1CQ53FD0 456 aaPredicted RBP10.01□□□□□ -0.81
CACNA1A-242ENST00000637485 HHIPL2Q6UWX4 724 aa10.01□□□□□ -0.81
CACNA1A-242ENST00000637485 KLF6Q99612 283 aaPredicted RBP10.01□□□□□ -0.81
CACNA1A-242ENST00000637485 EIF2AK1Q9BQI3 630 aaKnown RBP10.01□□□□□ -0.81
CACNA1A-242ENST00000637485 THUMPD3Q9BV44 507 aaKnown RBP10.01□□□□□ -0.81
CACNA1A-242ENST00000637485 RAVER2Q9HCJ3 691 aaKnown RBP10.01□□□□□ -0.81
CACNA1A-242ENST00000637485 NYAP2Q9P242 653 aa10.01□□□□□ -0.81
CACNA1A-242ENST00000637485 TMCC3Q9ULS5 477 aa10.01□□□□□ -0.81
CACNA1A-242ENST00000637485 DAGLAQ9Y4D2 1042 aa10.01□□□□□ -0.81
CACNA1A-242ENST00000637485 GPC6Q9Y625 555 aaPredicted RBP10.01□□□□□ -0.81
CACNA1A-242ENST00000637485 SPATA31A6Q5VVP1 1343 aa10.01□□□□□ -0.81
CACNA1A-242ENST00000637485 MTSS1O43312 755 aa10□□□□□ -0.81
CACNA1A-242ENST00000637485 NOS1APO75052 506 aaPredicted RBP10□□□□□ -0.81
CACNA1A-242ENST00000637485 ALOX15P16050 662 aaPredicted RBP10□□□□□ -0.81
CACNA1A-242ENST00000637485 ATF6P18850 670 aa10□□□□□ -0.81
CACNA1A-242ENST00000637485 GALK1P51570 392 aa10□□□□□ -0.81
CACNA1A-242ENST00000637485 VAMP7P51809 220 aa10□□□□□ -0.81
CACNA1A-242ENST00000637485 ZNF543Q08ER8 600 aa10□□□□□ -0.81
CACNA1A-242ENST00000637485 KRT33BQ14525 404 aa10□□□□□ -0.81
CACNA1A-242ENST00000637485 BROXQ5VW32 411 aa10□□□□□ -0.81
CACNA1A-242ENST00000637485 PSMA8Q8TAA3 256 aa10□□□□□ -0.81
CACNA1A-242ENST00000637485 EPS8L3Q8TE67 593 aaKnown RBP10□□□□□ -0.81
CACNA1A-242ENST00000637485 C2orf40Q9H1Z8 148 aa10□□□□□ -0.81
CACNA1A-242ENST00000637485 ACAD9Q9H845 621 aa10□□□□□ -0.81
CACNA1A-242ENST00000637485 ATXN2Q99700 1313 aaKnown RBP10□□□□□ -0.81
CACNA1A-242ENST00000637485 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10□□□□□ -0.81
CACNA1A-242ENST00000637485 TULP2O00295 520 aa10□□□□□ -0.81
CACNA1A-242ENST00000637485 CLDN3O15551 220 aa10□□□□□ -0.81
CACNA1A-242ENST00000637485 WFS1O76024 890 aa10□□□□□ -0.81
CACNA1A-242ENST00000637485 ARHGEF6Q15052 776 aa10□□□□□ -0.81
CACNA1A-242ENST00000637485 ACAP2Q15057 778 aa10□□□□□ -0.81
CACNA1A-242ENST00000637485 ZNF667Q5HYK9 610 aa10□□□□□ -0.81
CACNA1A-242ENST00000637485 FOXR1Q6PIV2 292 aa10□□□□□ -0.81
CACNA1A-242ENST00000637485 POTEGQ6S5H5 508 aa10□□□□□ -0.81
CACNA1A-242ENST00000637485 PEX5LQ8IYB4 626 aa10□□□□□ -0.81
CACNA1A-242ENST00000637485 C8orf4Q9NR00 106 aa10□□□□□ -0.81
CACNA1A-242ENST00000637485 COMMD8Q9NX08 183 aa10□□□□□ -0.81
CACNA1A-242ENST00000637485 PAK5Q9P286 719 aa10□□□□□ -0.81
CACNA1A-242ENST00000637485 DCCP43146 1447 aa10□□□□□ -0.81
CACNA1A-242ENST00000637485 FOXN1O15353 648 aa10□□□□□ -0.81
CACNA1A-242ENST00000637485 RHOBTB3O94955 611 aa10□□□□□ -0.81
CACNA1A-242ENST00000637485 LDLRP01130 860 aa10□□□□□ -0.81
CACNA1A-242ENST00000637485 ZNF12P17014 697 aa10□□□□□ -0.81
CACNA1A-242ENST00000637485 SOX11P35716 441 aa10□□□□□ -0.81
CACNA1A-242ENST00000637485 AP3M2P53677 418 aa10□□□□□ -0.81
CACNA1A-242ENST00000637485 FAM98BQ52LJ0 330 aaKnown RBP10□□□□□ -0.81
CACNA1A-242ENST00000637485 PDPK2PQ6A1A2 396 aa10□□□□□ -0.81
CACNA1A-242ENST00000637485 BICRALQ6AI39 1079 aa10□□□□□ -0.81
CACNA1A-242ENST00000637485 PPIL6Q8IXY8 311 aa10□□□□□ -0.81
CACNA1A-242ENST00000637485 HPS3Q969F9 1004 aa10□□□□□ -0.81
CACNA1A-242ENST00000637485 CENPTQ96BT3 561 aa10□□□□□ -0.81
CACNA1A-242ENST00000637485 ADAM33Q9BZ11 813 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms