RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 OAS1P00973 400 aaKnown RBP19.44■□□□□ 0.7
CLN6-214ENST00000636314 PXNP49023 591 aaPredicted RBP19.44■□□□□ 0.7
CLN6-214ENST00000636314 MAP3K7CLP57077 242 aa19.44■□□□□ 0.7
CLN6-214ENST00000636314 SLC7A9P82251 487 aa19.44■□□□□ 0.7
CLN6-214ENST00000636314 AMPD2Q01433 879 aa19.44■□□□□ 0.7
CLN6-214ENST00000636314 SF3A2Q15428 464 aaKnown RBP19.44■□□□□ 0.7
CLN6-214ENST00000636314 CCDC40Q4G0X9 1142 aa19.44■□□□□ 0.7
CLN6-214ENST00000636314 ZNF394Q53GI3 561 aa19.44■□□□□ 0.7
CLN6-214ENST00000636314 ZMIZ2Q8NF64 920 aa19.44■□□□□ 0.7
CLN6-214ENST00000636314 SCAMP5Q8TAC9 235 aa19.44■□□□□ 0.7
CLN6-214ENST00000636314 WHAMMQ8TF30 809 aa19.44■□□□□ 0.7
CLN6-214ENST00000636314 SLC35C1Q96A29 364 aa19.44■□□□□ 0.7
CLN6-214ENST00000636314 CYFIP2Q96F07 1278 aa19.44■□□□□ 0.7
CLN6-214ENST00000636314 HNRNPABQ99729 332 aaKnown RBP19.44■□□□□ 0.7
CLN6-214ENST00000636314 CSNK1G1Q9HCP0 422 aa19.44■□□□□ 0.7
CLN6-214ENST00000636314 COMMD8Q9NX08 183 aa19.44■□□□□ 0.7
CLN6-214ENST00000636314 CPQQ9Y646 472 aa19.44■□□□□ 0.7
CLN6-214ENST00000636314 OTOL1A6NHN0 477 aaPredicted RBP19.43■□□□□ 0.7
CLN6-214ENST00000636314 LEFTY2O00292 366 aa19.43■□□□□ 0.7
CLN6-214ENST00000636314 BEST1O76090 585 aa19.43■□□□□ 0.7
CLN6-214ENST00000636314 BMP6P22004 513 aa19.43■□□□□ 0.7
CLN6-214ENST00000636314 HOXA6P31267 233 aa19.43■□□□□ 0.7
CLN6-214ENST00000636314 TTI2Q6NXR4 508 aa19.43■□□□□ 0.7
CLN6-214ENST00000636314 JAKMIP2Q96AA8 810 aa19.43■□□□□ 0.7
CLN6-214ENST00000636314 ARID3AQ99856 593 aa19.43■□□□□ 0.7
CLN6-214ENST00000636314 RNF38Q9H0F5 515 aa19.43■□□□□ 0.7
CLN6-214ENST00000636314 FBXO44Q9H4M3 255 aa19.43■□□□□ 0.7
CLN6-214ENST00000636314 ECT2Q9H8V3 914 aa19.43■□□□□ 0.7
CLN6-214ENST00000636314 CISHQ9NSE2 258 aa19.43■□□□□ 0.7
CLN6-214ENST00000636314 SMPD4Q9NXE4 827 aa19.43■□□□□ 0.7
CLN6-214ENST00000636314 GMIPQ9P107 970 aa19.43■□□□□ 0.7
CLN6-214ENST00000636314 COQ4Q9Y3A0 265 aa19.43■□□□□ 0.7
CLN6-214ENST00000636314 PPP1R3GB7ZBB8 358 aa19.42■□□□□ 0.7
CLN6-214ENST00000636314 RPP40O75818 363 aaKnown RBP19.42■□□□□ 0.7
CLN6-214ENST00000636314 CCDC192P0DO97 292 aa19.42■□□□□ 0.7
CLN6-214ENST00000636314 MBL2P11226 248 aaPredicted RBP19.42■□□□□ 0.7
CLN6-214ENST00000636314 PAK1Q13153 545 aa19.42■□□□□ 0.7
CLN6-214ENST00000636314 EML3Q32P44 896 aa19.42■□□□□ 0.7
CLN6-214ENST00000636314 PKN3Q6P5Z2 889 aa19.42■□□□□ 0.7
CLN6-214ENST00000636314 FOXR2Q6PJQ5 311 aa19.42■□□□□ 0.7
CLN6-214ENST00000636314 CLEC20AQ6ZU45 233 aa19.42■□□□□ 0.7
CLN6-214ENST00000636314 CACNA2D4Q7Z3S7 1137 aa19.42■□□□□ 0.7
CLN6-214ENST00000636314 FILIP1Q7Z7B0 1213 aa19.42■□□□□ 0.7
CLN6-214ENST00000636314 TRIML1Q8N9V2 468 aa19.42■□□□□ 0.7
CLN6-214ENST00000636314 GAB3Q8WWW8 586 aa19.42■□□□□ 0.7
CLN6-214ENST00000636314 DUSP9Q99956 384 aaKnown RBP19.42■□□□□ 0.7
CLN6-214ENST00000636314 FAM124BQ9H5Z6 455 aaPredicted RBP19.42■□□□□ 0.7
CLN6-214ENST00000636314 IL37Q9NZH6 218 aa19.42■□□□□ 0.7
CLN6-214ENST00000636314 SLC8A2Q9UPR5 921 aa19.42■□□□□ 0.7
CLN6-214ENST00000636314 CNOT1A5YKK6 2376 aaKnown RBP19.42■□□□□ 0.7
CLN6-214ENST00000636314 FAM92AA1XBS5 289 aa19.41■□□□□ 0.7
CLN6-214ENST00000636314 NFATC1O95644 943 aa19.41■□□□□ 0.7
CLN6-214ENST00000636314 ZXDBP98169 803 aa19.41■□□□□ 0.7
CLN6-214ENST00000636314 GRSF1Q12849 480 aaKnown RBP eCLIP19.41■□□□□ 0.7
CLN6-214ENST00000636314 HECTD3Q5T447 861 aa19.41■□□□□ 0.7
CLN6-214ENST00000636314 KBTBD6Q86V97 674 aa19.41■□□□□ 0.7
CLN6-214ENST00000636314 DDX42Q86XP3 938 aaKnown RBP eCLIP19.41■□□□□ 0.7
CLN6-214ENST00000636314 TATDN2Q93075 761 aa19.41■□□□□ 0.7
CLN6-214ENST00000636314 EXOC4Q96A65 974 aa19.41■□□□□ 0.7
CLN6-214ENST00000636314 HEXIM2Q96MH2 286 aaKnown RBP19.41■□□□□ 0.7
CLN6-214ENST00000636314 PNPLA8Q9NP80 782 aa19.41■□□□□ 0.7
CLN6-214ENST00000636314 CHORDC1Q9UHD1 332 aaPredicted RBP19.41■□□□□ 0.7
CLN6-214ENST00000636314 ANGPTL2Q9UKU9 493 aa19.41■□□□□ 0.7
CLN6-214ENST00000636314 USP24Q9UPU5 2620 aa19.41■□□□□ 0.7
CLN6-214ENST00000636314 LAMA1P25391 3075 aa19.4■□□□□ 0.7
CLN6-214ENST00000636314 COCHO43405 550 aa19.4■□□□□ 0.7
CLN6-214ENST00000636314 EPN2O95208 641 aa19.4■□□□□ 0.7
CLN6-214ENST00000636314 ZNF806P0C7X5 589 aa19.4■□□□□ 0.7
CLN6-214ENST00000636314 GJA4P35212 333 aa19.4■□□□□ 0.7
CLN6-214ENST00000636314 FMO5P49326 533 aa19.4■□□□□ 0.7
CLN6-214ENST00000636314 TUBP50607 506 aa19.4■□□□□ 0.7
CLN6-214ENST00000636314 LIMK1P53667 647 aa19.4■□□□□ 0.7
CLN6-214ENST00000636314 STX17P56962 302 aa19.4■□□□□ 0.7
CLN6-214ENST00000636314 YWHAEP62258 255 aaKnown RBP19.4■□□□□ 0.7
CLN6-214ENST00000636314 NR1H3Q13133 447 aa19.4■□□□□ 0.7
CLN6-214ENST00000636314 CUL2Q13617 745 aa19.4■□□□□ 0.7
CLN6-214ENST00000636314 CAMK4Q16566 473 aa19.4■□□□□ 0.7
CLN6-214ENST00000636314 TMEM196Q5HYL7 178 aa19.4■□□□□ 0.7
CLN6-214ENST00000636314 PPP1R26Q5T8A7 1209 aaPredicted RBP19.4■□□□□ 0.7
CLN6-214ENST00000636314 N4BP2L1Q5TBK1 243 aaPredicted RBP19.4■□□□□ 0.7
CLN6-214ENST00000636314 SNX30Q5VWJ9 437 aa19.4■□□□□ 0.7
CLN6-214ENST00000636314 GPRIN1Q7Z2K8 1008 aa19.4■□□□□ 0.7
CLN6-214ENST00000636314 CHFRQ96EP1 664 aa19.4■□□□□ 0.7
CLN6-214ENST00000636314 TMEM176AQ96HP8 235 aa19.4■□□□□ 0.7
CLN6-214ENST00000636314 LOXL4Q96JB6 756 aa19.4■□□□□ 0.7
CLN6-214ENST00000636314 NACA2Q9H009 215 aa19.4■□□□□ 0.7
CLN6-214ENST00000636314 CCSER2Q9H7U1 834 aa19.4■□□□□ 0.7
CLN6-214ENST00000636314 TLR8Q9NR97 1041 aaKnown RBP19.4■□□□□ 0.7
CLN6-214ENST00000636314 CFAP97Q9P2B7 532 aa19.4■□□□□ 0.7
CLN6-214ENST00000636314 ZFHX4Q86UP3 3567 aa19.4■□□□□ 0.7
CLN6-214ENST00000636314 KIAA1549LQ6ZVL6 1849 aa19.39■□□□□ 0.7
CLN6-214ENST00000636314 TRDMT1O14717 391 aaKnown RBP19.39■□□□□ 0.69
CLN6-214ENST00000636314 SLC9A3R1O14745 358 aaPredicted RBP19.39■□□□□ 0.69
CLN6-214ENST00000636314 ATG13O75143 517 aa19.39■□□□□ 0.69
CLN6-214ENST00000636314 ZDHHC11BP0C7U3 371 aa19.39■□□□□ 0.69
CLN6-214ENST00000636314 ACO1P21399 889 aaKnown RBP19.39■□□□□ 0.69
CLN6-214ENST00000636314 RAD23BP54727 409 aa19.39■□□□□ 0.69
CLN6-214ENST00000636314 LRMPQ12912 555 aa19.39■□□□□ 0.69
CLN6-214ENST00000636314 FSTL4Q6MZW2 842 aa19.39■□□□□ 0.69
CLN6-214ENST00000636314 KIAA1958Q8N8K9 716 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms