RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, human

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHD2-223	ENST00000636306	TAGLN3	Q9UI15	199 aa		11.2	□□□□□ -0.62
CHD2-223	ENST00000636306	GRID1	Q9ULK0	1009 aa		11.2	□□□□□ -0.62
CHD2-223	ENST00000636306	SNX9	Q9Y5X1	595 aa		11.2	□□□□□ -0.62
CHD2-223	ENST00000636306	ZHX2	Q9Y6X8	837 aa		11.2	□□□□□ -0.62
CHD2-223	ENST00000636306	NFASC	O94856	1347 aa		11.2	□□□□□ -0.62
CHD2-223	ENST00000636306	TESPA1	A2RU30	521 aa	Predicted RBP	11.19	□□□□□ -0.62
CHD2-223	ENST00000636306	FOXO6	A8MYZ6	492 aa		11.19	□□□□□ -0.62
CHD2-223	ENST00000636306	ZNF701	M0R085	212 aa	Predicted RBP	11.19	□□□□□ -0.62
CHD2-223	ENST00000636306	TXNDC9	O14530	226 aa		11.19	□□□□□ -0.62
CHD2-223	ENST00000636306	SPTLC1	O15269	473 aa		11.19	□□□□□ -0.62
CHD2-223	ENST00000636306	TGFB1I1	O43294	461 aa		11.19	□□□□□ -0.62
CHD2-223	ENST00000636306	PARN	O95453	639 aa	Known RBP	11.19	□□□□□ -0.62
CHD2-223	ENST00000636306	HOXD11	P31277	338 aa	Predicted RBP	11.19	□□□□□ -0.62
CHD2-223	ENST00000636306	YWHAB	P31946	246 aa	Known RBP	11.19	□□□□□ -0.62
CHD2-223	ENST00000636306	STAT1	P42224	750 aa		11.19	□□□□□ -0.62
CHD2-223	ENST00000636306	RXRG	P48443	463 aa		11.19	□□□□□ -0.62
CHD2-223	ENST00000636306	HSPA13	P48723	471 aa		11.19	□□□□□ -0.62
CHD2-223	ENST00000636306	NCKAP1L	P55160	1127 aa		11.19	□□□□□ -0.62
CHD2-223	ENST00000636306	SIX1	Q15475	284 aa	Predicted RBP	11.19	□□□□□ -0.62
CHD2-223	ENST00000636306	SLC1A5	Q15758	541 aa		11.19	□□□□□ -0.62
CHD2-223	ENST00000636306	ZNF829	Q3KNS6	432 aa	Predicted RBP	11.19	□□□□□ -0.62
CHD2-223	ENST00000636306	EFHC1	Q5JVL4	640 aa		11.19	□□□□□ -0.62
CHD2-223	ENST00000636306	OGFRL1	Q5TC84	451 aa	Predicted RBP	11.19	□□□□□ -0.62
CHD2-223	ENST00000636306	USP37	Q86T82	979 aa		11.19	□□□□□ -0.62
CHD2-223	ENST00000636306	NOP9	Q86U38	636 aa	Known RBP	11.19	□□□□□ -0.62
CHD2-223	ENST00000636306	PALB2	Q86YC2	1186 aa		11.19	□□□□□ -0.62
CHD2-223	ENST00000636306	TRIM11	Q96F44	468 aa		11.19	□□□□□ -0.62
CHD2-223	ENST00000636306	OXNAD1	Q96HP4	312 aa	Predicted RBP	11.19	□□□□□ -0.62
CHD2-223	ENST00000636306	GPATCH1	Q9BRR8	931 aa	Known RBP	11.19	□□□□□ -0.62
CHD2-223	ENST00000636306	TMEM120A	Q9BXJ8	343 aa		11.19	□□□□□ -0.62
CHD2-223	ENST00000636306	PKD2L1	Q9P0L9	805 aa		11.19	□□□□□ -0.62
CHD2-223	ENST00000636306	IGSF9	Q9P2J2	1179 aa		11.19	□□□□□ -0.62
CHD2-223	ENST00000636306	TBK1	Q9UHD2	729 aa		11.19	□□□□□ -0.62
CHD2-223	ENST00000636306	SLC24A2	Q9UI40	661 aa		11.19	□□□□□ -0.62
CHD2-223	ENST00000636306	GNPTG	Q9UJJ9	305 aa		11.19	□□□□□ -0.62
CHD2-223	ENST00000636306	ANAPC5	Q9UJX4	755 aa		11.19	□□□□□ -0.62
CHD2-223	ENST00000636306	ADAMTS5	Q9UNA0	930 aa		11.19	□□□□□ -0.62
CHD2-223	ENST00000636306	DTNA	Q9Y4J8	743 aa		11.19	□□□□□ -0.62
CHD2-223	ENST00000636306	TIMM22	Q9Y584	194 aa		11.19	□□□□□ -0.62
CHD2-223	ENST00000636306	PAPPA2	Q9BXP8	1791 aa		11.19	□□□□□ -0.62
CHD2-223	ENST00000636306	ANKRD62	A6NC57	917 aa		11.18	□□□□□ -0.62
CHD2-223	ENST00000636306	CAPN14	A8MX76	684 aa		11.18	□□□□□ -0.62
CHD2-223	ENST00000636306	IQCJ-SCHIP1	C9J366	451 aa	Predicted RBP	11.18	□□□□□ -0.62
CHD2-223	ENST00000636306	FAM47E-STBD1	D6RA91	191 aa		11.18	□□□□□ -0.62
CHD2-223	ENST00000636306	TM9SF1	O15321	606 aa		11.18	□□□□□ -0.62
CHD2-223	ENST00000636306	TP73	O15350	636 aa		11.18	□□□□□ -0.62
CHD2-223	ENST00000636306	CCNT2	O60583	730 aa	Known RBP	11.18	□□□□□ -0.62
CHD2-223	ENST00000636306	TPPP	O94811	219 aa		11.18	□□□□□ -0.62
CHD2-223	ENST00000636306	PSAP	P07602	524 aa		11.18	□□□□□ -0.62
CHD2-223	ENST00000636306	CA4	P22748	312 aa		11.18	□□□□□ -0.62
CHD2-223	ENST00000636306	PON1	P27169	355 aa		11.18	□□□□□ -0.62
CHD2-223	ENST00000636306	TKT	P29401	623 aa	Known RBP	11.18	□□□□□ -0.62
CHD2-223	ENST00000636306	ALDH3B2	P48448	385 aa		11.18	□□□□□ -0.62
CHD2-223	ENST00000636306	HMGCS2	P54868	508 aa		11.18	□□□□□ -0.62
CHD2-223	ENST00000636306	NOP14	P78316	857 aa	Known RBP	11.18	□□□□□ -0.62
CHD2-223	ENST00000636306	MYL7	Q01449	175 aa		11.18	□□□□□ -0.62
CHD2-223	ENST00000636306	C16orf72	Q14CZ0	275 aa		11.18	□□□□□ -0.62
CHD2-223	ENST00000636306	MAPK6	Q16659	721 aa		11.18	□□□□□ -0.62
CHD2-223	ENST00000636306	FBXL19	Q6PCT2	694 aa		11.18	□□□□□ -0.62
CHD2-223	ENST00000636306	CHST13	Q8NET6	341 aa		11.18	□□□□□ -0.62
CHD2-223	ENST00000636306	REPS2	Q8NFH8	660 aa		11.18	□□□□□ -0.62
CHD2-223	ENST00000636306	LNX1	Q8TBB1	728 aa	Predicted RBP	11.18	□□□□□ -0.62
CHD2-223	ENST00000636306	ALKBH8	Q96BT7	664 aa	Known RBP	11.18	□□□□□ -0.62
CHD2-223	ENST00000636306	KLRG1	Q96E93	195 aa		11.18	□□□□□ -0.62
CHD2-223	ENST00000636306	OLFM1	Q99784	485 aa		11.18	□□□□□ -0.62
CHD2-223	ENST00000636306	STRA6	Q9BX79	667 aa		11.18	□□□□□ -0.62
CHD2-223	ENST00000636306	OSGEP	Q9NPF4	335 aa		11.18	□□□□□ -0.62
CHD2-223	ENST00000636306	ATAD3A	Q9NVI7	634 aa		11.18	□□□□□ -0.62
CHD2-223	ENST00000636306	DMAC2	Q9NW81	257 aa		11.18	□□□□□ -0.62
CHD2-223	ENST00000636306	PCDHA10	Q9Y5I2	948 aa		11.18	□□□□□ -0.62
CHD2-223	ENST00000636306	ALG6	Q9Y672	507 aa		11.18	□□□□□ -0.62
CHD2-223	ENST00000636306		H3BSA7	217 aa		11.18	□□□□□ -0.62
CHD2-223	ENST00000636306	PFDN6	O15212	129 aa		11.18	□□□□□ -0.62
CHD2-223	ENST00000636306	CLIC2	O15247	247 aa		11.18	□□□□□ -0.62
CHD2-223	ENST00000636306	NR3C2	P08235	984 aa		11.18	□□□□□ -0.62
CHD2-223	ENST00000636306	FAM58BP	P0C7Q3	252 aa		11.18	□□□□□ -0.62
CHD2-223	ENST00000636306	ATF2	P15336	505 aa		11.18	□□□□□ -0.62
CHD2-223	ENST00000636306	ZNF23	P17027	643 aa		11.18	□□□□□ -0.62
CHD2-223	ENST00000636306	IVD	P26440	423 aa		11.18	□□□□□ -0.62
CHD2-223	ENST00000636306	PML	P29590	882 aa		11.18	□□□□□ -0.62
CHD2-223	ENST00000636306	RPA3	P35244	121 aa	Predicted RBP	11.18	□□□□□ -0.62
CHD2-223	ENST00000636306	FMO5	P49326	533 aa		11.18	□□□□□ -0.62
CHD2-223	ENST00000636306	EIF2B2	P49770	351 aa	Known RBP	11.18	□□□□□ -0.62
CHD2-223	ENST00000636306	ENTPD1	P49961	510 aa		11.18	□□□□□ -0.62
CHD2-223	ENST00000636306	CYP2J2	P51589	502 aa		11.18	□□□□□ -0.62
CHD2-223	ENST00000636306	KRT17	Q04695	432 aa		11.18	□□□□□ -0.62
CHD2-223	ENST00000636306	BFSP1	Q12934	665 aa		11.18	□□□□□ -0.62
CHD2-223	ENST00000636306	BAAT	Q14032	418 aa	Predicted RBP	11.18	□□□□□ -0.62
CHD2-223	ENST00000636306	METTL21C	Q5VZV1	264 aa		11.18	□□□□□ -0.62
CHD2-223	ENST00000636306	ZNF280D	Q6N043	979 aa		11.18	□□□□□ -0.62
CHD2-223	ENST00000636306	LVRN	Q6Q4G3	990 aa		11.18	□□□□□ -0.62
CHD2-223	ENST00000636306	CATSPERG	Q6ZRH7	1159 aa		11.18	□□□□□ -0.62
CHD2-223	ENST00000636306	VSIG10L	Q86VR7	867 aa		11.18	□□□□□ -0.62
CHD2-223	ENST00000636306	ZDHHC14	Q8IZN3	488 aa		11.18	□□□□□ -0.62
CHD2-223	ENST00000636306	RBM15B	Q8NDT2	890 aa	Known RBP	11.18	□□□□□ -0.62
CHD2-223	ENST00000636306	MCPH1	Q8NEM0	835 aa		11.18	□□□□□ -0.62
CHD2-223	ENST00000636306	USP33	Q8TEY7	942 aa		11.18	□□□□□ -0.62
CHD2-223	ENST00000636306	FIZ1	Q96SL8	496 aa		11.18	□□□□□ -0.62
CHD2-223	ENST00000636306	LBHD1	Q9BQE6	289 aa	Predicted RBP	11.18	□□□□□ -0.62
CHD2-223	ENST00000636306	MANSC1	Q9H8J5	431 aa		11.18	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 48 ms