RNA–Protein interactions for RNA: ENST00000631247.1

UBE3A-223, Transcript of ubiquitin protein ligase E3A, human

TSL 5

Gene UBE3A, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBE3A-223	ENST00000631247	PIK3CA	P42336	1068 aa		10.99	□□□□□ -0.65
UBE3A-223	ENST00000631247	LIMK1	P53667	647 aa		10.99	□□□□□ -0.65
UBE3A-223	ENST00000631247	SLC5A3	P53794	718 aa		10.99	□□□□□ -0.65
UBE3A-223	ENST00000631247	CDH8	P55286	799 aa		10.99	□□□□□ -0.65
UBE3A-223	ENST00000631247	ZXDB	P98169	803 aa		10.99	□□□□□ -0.65
UBE3A-223	ENST00000631247	DNM1	Q05193	864 aa	Known RBP	10.99	□□□□□ -0.65
UBE3A-223	ENST00000631247	DHCR24	Q15392	516 aa		10.99	□□□□□ -0.65
UBE3A-223	ENST00000631247	USP39	Q53GS9	565 aa	Known RBP	10.99	□□□□□ -0.65
UBE3A-223	ENST00000631247	HECTD3	Q5T447	861 aa		10.99	□□□□□ -0.65
UBE3A-223	ENST00000631247	BTBD8	Q5XKL5	378 aa		10.99	□□□□□ -0.65
UBE3A-223	ENST00000631247	CEP135	Q66GS9	1140 aa		10.99	□□□□□ -0.65
UBE3A-223	ENST00000631247	CCDC33	Q8N5R6	958 aa		10.99	□□□□□ -0.65
UBE3A-223	ENST00000631247	KIAA1958	Q8N8K9	716 aa		10.99	□□□□□ -0.65
UBE3A-223	ENST00000631247	OVCA2	Q8WZ82	227 aa		10.99	□□□□□ -0.65
UBE3A-223	ENST00000631247	ZNF516	Q92618	1163 aa		10.99	□□□□□ -0.65
UBE3A-223	ENST00000631247	EZH1	Q92800	747 aa	Predicted RBP	10.99	□□□□□ -0.65
UBE3A-223	ENST00000631247	ZC3H10	Q96K80	434 aa	Known RBP	10.99	□□□□□ -0.65
UBE3A-223	ENST00000631247	CNTNAP3B	Q96NU0	1288 aa		10.99	□□□□□ -0.65
UBE3A-223	ENST00000631247	PNKP	Q96T60	521 aa		10.99	□□□□□ -0.65
UBE3A-223	ENST00000631247	CNTNAP3	Q9BZ76	1288 aa		10.99	□□□□□ -0.65
UBE3A-223	ENST00000631247	IMPG2	Q9BZV3	1241 aa		10.99	□□□□□ -0.65
UBE3A-223	ENST00000631247	RNF38	Q9H0F5	515 aa		10.99	□□□□□ -0.65
UBE3A-223	ENST00000631247	VRTN	Q9H8Y1	702 aa		10.99	□□□□□ -0.65
UBE3A-223	ENST00000631247	ARHGEF4	Q9NR80	690 aa		10.99	□□□□□ -0.65
UBE3A-223	ENST00000631247	KRT82	Q9NSB4	513 aa		10.99	□□□□□ -0.65
UBE3A-223	ENST00000631247	TBC1D14	Q9P2M4	693 aa		10.99	□□□□□ -0.65
UBE3A-223	ENST00000631247	EBF1	Q9UH73	591 aa		10.99	□□□□□ -0.65
UBE3A-223	ENST00000631247	FRMD4B	Q9Y2L6	1034 aa		10.99	□□□□□ -0.65
UBE3A-223	ENST00000631247	KMT2B	Q9UMN6	2715 aa	Predicted RBP	10.99	□□□□□ -0.65
UBE3A-223	ENST00000631247	TPR	P12270	2363 aa	Known RBP	10.98	□□□□□ -0.65
UBE3A-223	ENST00000631247	E2F8	A0AVK6	867 aa		10.98	□□□□□ -0.65
UBE3A-223	ENST00000631247		K7EQS6	105 aa		10.98	□□□□□ -0.65
UBE3A-223	ENST00000631247	DCLK1	O15075	740 aa		10.98	□□□□□ -0.65
UBE3A-223	ENST00000631247	CALU	O43852	315 aa	Predicted RBP	10.98	□□□□□ -0.65
UBE3A-223	ENST00000631247	KIF20A	O95235	890 aa		10.98	□□□□□ -0.65
UBE3A-223	ENST00000631247	KAT7	O95251	611 aa		10.98	□□□□□ -0.65
UBE3A-223	ENST00000631247	NR3C1	P04150	777 aa		10.98	□□□□□ -0.65
UBE3A-223	ENST00000631247	IRF1	P10914	325 aa		10.98	□□□□□ -0.65
UBE3A-223	ENST00000631247	FECH	P22830	423 aa		10.98	□□□□□ -0.65
UBE3A-223	ENST00000631247	EIF2D	P41214	584 aa	Known RBP	10.98	□□□□□ -0.65
UBE3A-223	ENST00000631247	MRPS21	P82921	87 aa	Known RBP	10.98	□□□□□ -0.65
UBE3A-223	ENST00000631247	KDSR	Q06136	332 aa		10.98	□□□□□ -0.65
UBE3A-223	ENST00000631247	SGSM1	Q2NKQ1	1148 aa		10.98	□□□□□ -0.65
UBE3A-223	ENST00000631247	PREPL	Q4J6C6	727 aa	Predicted RBP	10.98	□□□□□ -0.65
UBE3A-223	ENST00000631247	STPG1	Q5TH74	334 aa		10.98	□□□□□ -0.65
UBE3A-223	ENST00000631247	RNF43	Q68DV7	783 aa		10.98	□□□□□ -0.65
UBE3A-223	ENST00000631247	ACOT1	Q86TX2	421 aa		10.98	□□□□□ -0.65
UBE3A-223	ENST00000631247	SLC9A9	Q8IVB4	645 aa		10.98	□□□□□ -0.65
UBE3A-223	ENST00000631247	PARP9	Q8IXQ6	854 aa		10.98	□□□□□ -0.65
UBE3A-223	ENST00000631247	KIAA0895	Q8NCT3	520 aa		10.98	□□□□□ -0.65
UBE3A-223	ENST00000631247	SCAMP5	Q8TAC9	235 aa		10.98	□□□□□ -0.65
UBE3A-223	ENST00000631247	PARD3B	Q8TEW8	1205 aa		10.98	□□□□□ -0.65
UBE3A-223	ENST00000631247	USP33	Q8TEY7	942 aa		10.98	□□□□□ -0.65
UBE3A-223	ENST00000631247	PAGE5	Q96GU1	130 aa		10.98	□□□□□ -0.65
UBE3A-223	ENST00000631247	CHAMP1	Q96JM3	812 aa		10.98	□□□□□ -0.65
UBE3A-223	ENST00000631247	SPACA7	Q96KW9	195 aa		10.98	□□□□□ -0.65
UBE3A-223	ENST00000631247	KCNK16	Q96T55	309 aa		10.98	□□□□□ -0.65
UBE3A-223	ENST00000631247	EDEM2	Q9BV94	578 aa		10.98	□□□□□ -0.65
UBE3A-223	ENST00000631247	IRX2	Q9BZI1	471 aa	Predicted RBP	10.98	□□□□□ -0.65
UBE3A-223	ENST00000631247	DNAI2	Q9GZS0	605 aa		10.98	□□□□□ -0.65
UBE3A-223	ENST00000631247	GZF1	Q9H116	711 aa	Predicted RBP	10.98	□□□□□ -0.65
UBE3A-223	ENST00000631247	DUSP15	Q9H1R2	295 aa	Predicted RBP	10.98	□□□□□ -0.65
UBE3A-223	ENST00000631247	SMOC1	Q9H4F8	434 aa		10.98	□□□□□ -0.65
UBE3A-223	ENST00000631247	TMEM30A	Q9NV96	361 aa		10.98	□□□□□ -0.65
UBE3A-223	ENST00000631247	BCCIP	Q9P287	314 aa	Known RBP eCLIP	10.98	□□□□□ -0.65
UBE3A-223	ENST00000631247	USP25	Q9UHP3	1055 aa		10.98	□□□□□ -0.65
UBE3A-223	ENST00000631247	MMP17	Q9ULZ9	603 aa		10.98	□□□□□ -0.65
UBE3A-223	ENST00000631247	C3orf80	F5H4A9	247 aa		10.97	□□□□□ -0.65
UBE3A-223	ENST00000631247	PDXK	O00764	312 aa		10.97	□□□□□ -0.65
UBE3A-223	ENST00000631247	COCH	O43405	550 aa		10.97	□□□□□ -0.65
UBE3A-223	ENST00000631247	ACTN4	O43707	911 aa	Known RBP	10.97	□□□□□ -0.65
UBE3A-223	ENST00000631247	KLF8	O95600	359 aa	Predicted RBP	10.97	□□□□□ -0.65
UBE3A-223	ENST00000631247	CAVIN2	O95810	425 aa		10.97	□□□□□ -0.65
UBE3A-223	ENST00000631247	C4BPA	P04003	597 aa	Known RBP	10.97	□□□□□ -0.65
UBE3A-223	ENST00000631247	MYL1	P05976	194 aa		10.97	□□□□□ -0.65
UBE3A-223	ENST00000631247	FAM200B	P0CF97	657 aa		10.97	□□□□□ -0.65
UBE3A-223	ENST00000631247	CCDC130	P13994	396 aa		10.97	□□□□□ -0.65
UBE3A-223	ENST00000631247	PFKFB1	P16118	471 aa		10.97	□□□□□ -0.65
UBE3A-223	ENST00000631247	GAD2	Q05329	585 aa		10.97	□□□□□ -0.65
UBE3A-223	ENST00000631247	GOLGA8F	Q08AF8	430 aa		10.97	□□□□□ -0.65
UBE3A-223	ENST00000631247	GOLGA8DP	Q0D2H9	430 aa		10.97	□□□□□ -0.65
UBE3A-223	ENST00000631247	STK4	Q13043	487 aa		10.97	□□□□□ -0.65
UBE3A-223	ENST00000631247	ORC1	Q13415	861 aa		10.97	□□□□□ -0.65
UBE3A-223	ENST00000631247	PKP1	Q13835	747 aa		10.97	□□□□□ -0.65
UBE3A-223	ENST00000631247	CRY1	Q16526	586 aa		10.97	□□□□□ -0.65
UBE3A-223	ENST00000631247	KMT5B	Q4FZB7	885 aa		10.97	□□□□□ -0.65
UBE3A-223	ENST00000631247	EOGT	Q5NDL2	527 aa		10.97	□□□□□ -0.65
UBE3A-223	ENST00000631247	PLA2G2C	Q5R387	149 aa		10.97	□□□□□ -0.65
UBE3A-223	ENST00000631247	NUDT18	Q6ZVK8	323 aa		10.97	□□□□□ -0.65
UBE3A-223	ENST00000631247	CYP2U1	Q7Z449	544 aa		10.97	□□□□□ -0.65
UBE3A-223	ENST00000631247	ADGRG2	Q8IZP9	1017 aa		10.97	□□□□□ -0.65
UBE3A-223	ENST00000631247	ALLC	Q8N6M5	410 aa		10.97	□□□□□ -0.65
UBE3A-223	ENST00000631247	TXNDC5	Q8NBS9	432 aa	Known RBP	10.97	□□□□□ -0.65
UBE3A-223	ENST00000631247	CCDC150	Q8NCX0	1101 aa		10.97	□□□□□ -0.65
UBE3A-223	ENST00000631247	PLEKHO2	Q8TD55	490 aa		10.97	□□□□□ -0.65
UBE3A-223	ENST00000631247	SLC2A14	Q8TDB8	520 aa		10.97	□□□□□ -0.65
UBE3A-223	ENST00000631247	WHAMM	Q8TF30	809 aa		10.97	□□□□□ -0.65
UBE3A-223	ENST00000631247	TAF4B	Q92750	862 aa		10.97	□□□□□ -0.65
UBE3A-223	ENST00000631247	JAKMIP2	Q96AA8	810 aa		10.97	□□□□□ -0.65
UBE3A-223	ENST00000631247	ELMO3	Q96BJ8	720 aa		10.97	□□□□□ -0.65

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