RNA–Protein interactions for RNA: ENST00000629725.2

TARDBP-228, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 1,031 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-228ENST00000629725 COCHO43405 550 aa21.4■■□□□ 1.02
TARDBP-228ENST00000629725 IDEP14735 1019 aa21.4■■□□□ 1.02
TARDBP-228ENST00000629725 WASP42768 502 aa21.4■■□□□ 1.02
TARDBP-228ENST00000629725 PLEKHG6Q3KR16 790 aa21.4■■□□□ 1.02
TARDBP-228ENST00000629725 RRAGBQ5VZM2 374 aa21.4■■□□□ 1.02
TARDBP-228ENST00000629725 RGL4Q8IZJ4 473 aa21.4■■□□□ 1.02
TARDBP-228ENST00000629725 NUP93Q8N1F7 819 aa21.4■■□□□ 1.02
TARDBP-228ENST00000629725 PDZD8Q8NEN9 1154 aa21.4■■□□□ 1.02
TARDBP-228ENST00000629725 OR6B3Q8NGW1 331 aa21.4■■□□□ 1.02
TARDBP-228ENST00000629725 ADAMTS14Q8WXS8 1223 aa21.4■■□□□ 1.02
TARDBP-228ENST00000629725 OVCA2Q8WZ82 227 aa21.4■■□□□ 1.02
TARDBP-228ENST00000629725 MRPL45Q9BRJ2 306 aaKnown RBP21.4■■□□□ 1.02
TARDBP-228ENST00000629725 SPHK2Q9NRA0 654 aa21.4■■□□□ 1.02
TARDBP-228ENST00000629725 TMEM30AQ9NV96 361 aa21.4■■□□□ 1.02
TARDBP-228ENST00000629725 CYP8B1Q9UNU6 501 aa21.4■■□□□ 1.02
TARDBP-228ENST00000629725 STARD13Q9Y3M8 1113 aa21.4■■□□□ 1.02
TARDBP-228ENST00000629725 TACC1O75410 805 aa21.39■■□□□ 1.01
TARDBP-228ENST00000629725 GJB3O75712 270 aa21.39■■□□□ 1.01
TARDBP-228ENST00000629725 PRPF6O94906 941 aaKnown RBP21.39■■□□□ 1.01
TARDBP-228ENST00000629725 RTN3O95197 1032 aaPredicted RBP21.39■■□□□ 1.01
TARDBP-228ENST00000629725 FTH1P19P0C7X4 201 aa21.39■■□□□ 1.01
TARDBP-228ENST00000629725 PTPN1P18031 435 aaKnown RBP21.39■■□□□ 1.01
TARDBP-228ENST00000629725 HECTD3Q5T447 861 aa21.39■■□□□ 1.01
TARDBP-228ENST00000629725 SDE2Q6IQ49 451 aa21.39■■□□□ 1.01
TARDBP-228ENST00000629725 BRAPQ7Z569 592 aa21.39■■□□□ 1.01
TARDBP-228ENST00000629725 PDZD3Q86UT5 571 aa21.39■■□□□ 1.01
TARDBP-228ENST00000629725 MIB1Q86YT6 1006 aa21.39■■□□□ 1.01
TARDBP-228ENST00000629725 BBS7Q8IWZ6 715 aa21.39■■□□□ 1.01
TARDBP-228ENST00000629725 PNPLA1Q8N8W4 532 aa21.39■■□□□ 1.01
TARDBP-228ENST00000629725 FBXO32Q969P5 355 aa21.39■■□□□ 1.01
TARDBP-228ENST00000629725 FGFBP2Q9BYJ0 223 aa21.39■■□□□ 1.01
TARDBP-228ENST00000629725 ZNF518BQ9C0D4 1074 aa21.39■■□□□ 1.01
TARDBP-228ENST00000629725 FAM124BQ9H5Z6 455 aaPredicted RBP21.39■■□□□ 1.01
TARDBP-228ENST00000629725 CCDC86Q9H6F5 360 aaKnown RBP21.39■■□□□ 1.01
TARDBP-228ENST00000629725 CHORDC1Q9UHD1 332 aaPredicted RBP21.39■■□□□ 1.01
TARDBP-228ENST00000629725 HCN2Q9UL51 889 aa21.39■■□□□ 1.01
TARDBP-228ENST00000629725 NME7Q9Y5B8 376 aa21.39■■□□□ 1.01
TARDBP-228ENST00000629725 BPTFQ12830 3046 aa21.38■■□□□ 1.01
TARDBP-228ENST00000629725 NDUFV2P19404 249 aa21.38■■□□□ 1.01
TARDBP-228ENST00000629725 COL28A1Q2UY09 1125 aa21.38■■□□□ 1.01
TARDBP-228ENST00000629725 SOWAHCQ53LP3 525 aaPredicted RBP21.38■■□□□ 1.01
TARDBP-228ENST00000629725 SYCP2LQ5T4T6 812 aa21.38■■□□□ 1.01
TARDBP-228ENST00000629725 TMEM25Q86YD3 366 aa21.38■■□□□ 1.01
TARDBP-228ENST00000629725 CBWD2Q8IUF1 395 aa21.38■■□□□ 1.01
TARDBP-228ENST00000629725 WDR49Q8IV35 697 aa21.38■■□□□ 1.01
TARDBP-228ENST00000629725 NAXDQ8IW45 347 aa21.38■■□□□ 1.01
TARDBP-228ENST00000629725 CHPFQ8IZ52 775 aa21.38■■□□□ 1.01
TARDBP-228ENST00000629725 IPO4Q8TEX9 1081 aaKnown RBP21.38■■□□□ 1.01
TARDBP-228ENST00000629725 ZNF419Q96HQ0 510 aaPredicted RBP21.38■■□□□ 1.01
TARDBP-228ENST00000629725 TMX3Q96JJ7 454 aa21.38■■□□□ 1.01
TARDBP-228ENST00000629725 DUSP9Q99956 384 aaKnown RBP21.38■■□□□ 1.01
TARDBP-228ENST00000629725 DPEP3Q9H4B8 488 aa21.38■■□□□ 1.01
TARDBP-228ENST00000629725 SUSD2Q9UGT4 822 aa21.38■■□□□ 1.01
TARDBP-228ENST00000629725 FRMD3A2A2Y4 597 aa21.37■■□□□ 1.01
TARDBP-228ENST00000629725 CLDN5O00501 218 aa21.37■■□□□ 1.01
TARDBP-228ENST00000629725 TRIM24O15164 1050 aa21.37■■□□□ 1.01
TARDBP-228ENST00000629725 NDUFS2O75306 463 aa21.37■■□□□ 1.01
TARDBP-228ENST00000629725 CST3P01034 146 aaPredicted RBP21.37■■□□□ 1.01
TARDBP-228ENST00000629725 GNSP15586 552 aa21.37■■□□□ 1.01
TARDBP-228ENST00000629725 TXLNAP40222 546 aa21.37■■□□□ 1.01
TARDBP-228ENST00000629725 EGFLAMQ63HQ2 1017 aa21.37■■□□□ 1.01
TARDBP-228ENST00000629725 LARP1BQ659C4 914 aaKnown RBP21.37■■□□□ 1.01
TARDBP-228ENST00000629725 CCNI2Q6ZMN8 369 aaPredicted RBP21.37■■□□□ 1.01
TARDBP-228ENST00000629725 TRAPPC11Q7Z392 1133 aa21.37■■□□□ 1.01
TARDBP-228ENST00000629725 ERLEC1Q96DZ1 483 aa21.37■■□□□ 1.01
TARDBP-228ENST00000629725 CD248Q9HCU0 757 aa21.37■■□□□ 1.01
TARDBP-228ENST00000629725 PANK4Q9NVE7 773 aa21.37■■□□□ 1.01
TARDBP-228ENST00000629725 PTPRBP23467 1997 aa21.37■■□□□ 1.01
TARDBP-228ENST00000629725 ACACAQ13085 2346 aa21.37■■□□□ 1.01
TARDBP-228ENST00000629725 FAM163BP0C2L3 166 aa21.36■■□□□ 1.01
TARDBP-228ENST00000629725 TUBP50607 506 aa21.36■■□□□ 1.01
TARDBP-228ENST00000629725 TNNC1P63316 161 aa21.36■■□□□ 1.01
TARDBP-228ENST00000629725 WDR72Q3MJ13 1102 aa21.36■■□□□ 1.01
TARDBP-228ENST00000629725 SNX30Q5VWJ9 437 aa21.36■■□□□ 1.01
TARDBP-228ENST00000629725 GRAMD4Q6IC98 578 aa21.36■■□□□ 1.01
TARDBP-228ENST00000629725 SPRYD3Q8NCJ5 442 aa21.36■■□□□ 1.01
TARDBP-228ENST00000629725 B3GALNT2Q8NCR0 500 aa21.36■■□□□ 1.01
TARDBP-228ENST00000629725 FOXJ1Q92949 421 aa21.36■■□□□ 1.01
TARDBP-228ENST00000629725 ACOX2Q99424 681 aa21.36■■□□□ 1.01
TARDBP-228ENST00000629725 B3GNT5Q9BYG0 378 aa21.36■■□□□ 1.01
TARDBP-228ENST00000629725 CCSER2Q9H7U1 834 aa21.36■■□□□ 1.01
TARDBP-228ENST00000629725 DNAJC17Q9NVM6 304 aaKnown RBP21.36■■□□□ 1.01
TARDBP-228ENST00000629725 SMC3Q9UQE7 1217 aa21.36■■□□□ 1.01
TARDBP-228ENST00000629725 APOBEC2Q9Y235 224 aaKnown RBP21.36■■□□□ 1.01
TARDBP-228ENST00000629725 A8MXQ7 604 aa21.35■■□□□ 1.01
TARDBP-228ENST00000629725 IRF1P10914 325 aa21.35■■□□□ 1.01
TARDBP-228ENST00000629725 WDR45BQ5MNZ6 344 aa21.35■■□□□ 1.01
TARDBP-228ENST00000629725 ERICH6BQ5W0A0 696 aa21.35■■□□□ 1.01
TARDBP-228ENST00000629725 SCAMP5Q8TAC9 235 aa21.35■■□□□ 1.01
TARDBP-228ENST00000629725 XPO6Q96QU8 1125 aaKnown RBP21.35■■□□□ 1.01
TARDBP-228ENST00000629725 KCNK16Q96T55 309 aa21.35■■□□□ 1.01
TARDBP-228ENST00000629725 GABRG3Q99928 467 aa21.35■■□□□ 1.01
TARDBP-228ENST00000629725 ZDHHC5Q9C0B5 715 aa21.35■■□□□ 1.01
TARDBP-228ENST00000629725 NACA2Q9H009 215 aa21.35■■□□□ 1.01
TARDBP-228ENST00000629725 CD93Q9NPY3 652 aa21.35■■□□□ 1.01
TARDBP-228ENST00000629725 HSPBP1Q9NZL4 362 aa21.35■■□□□ 1.01
TARDBP-228ENST00000629725 NEDD8-MDP1E9PL57 170 aa21.34■■□□□ 1.01
TARDBP-228ENST00000629725 DLATP10515 647 aaKnown RBP21.34■■□□□ 1.01
TARDBP-228ENST00000629725 TNNI1P19237 187 aa21.34■■□□□ 1.01
TARDBP-228ENST00000629725 MAOBP27338 520 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms