RNA–Protein interactions for RNA: ENST00000627460.1

CHD2-211, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-211ENST00000627460 PAPSS1O43252 624 aaPredicted RBP9.03□□□□□ -0.96
CHD2-211ENST00000627460 DDHD2O94830 711 aa9.03□□□□□ -0.96
CHD2-211ENST00000627460 ECEL1O95672 775 aa9.03□□□□□ -0.96
CHD2-211ENST00000627460 ZBED1O96006 694 aa9.03□□□□□ -0.96
CHD2-211ENST00000627460 LCP1P13796 627 aa9.03□□□□□ -0.96
CHD2-211ENST00000627460 LAG3P18627 525 aa9.03□□□□□ -0.96
CHD2-211ENST00000627460 ACAT1P24752 427 aaKnown RBP9.03□□□□□ -0.96
CHD2-211ENST00000627460 PPM1AP35813 382 aa9.03□□□□□ -0.96
CHD2-211ENST00000627460 BRCC3P46736 316 aa9.03□□□□□ -0.96
CHD2-211ENST00000627460 RGS7P49802 495 aa9.03□□□□□ -0.96
CHD2-211ENST00000627460 AFF1P51825 1210 aaKnown RBP9.03□□□□□ -0.96
CHD2-211ENST00000627460 TKTL1P51854 596 aa9.03□□□□□ -0.96
CHD2-211ENST00000627460 LBX1P52954 281 aa9.03□□□□□ -0.96
CHD2-211ENST00000627460 RNASE9P60153 205 aaKnown RBP9.03□□□□□ -0.96
CHD2-211ENST00000627460 CREMQ03060 361 aa9.03□□□□□ -0.96
CHD2-211ENST00000627460 CAV1Q03135 178 aa9.03□□□□□ -0.96
CHD2-211ENST00000627460 ADIGQ0VDE8 80 aa9.03□□□□□ -0.96
CHD2-211ENST00000627460 ZNF211Q13398 564 aaPredicted RBP9.03□□□□□ -0.96
CHD2-211ENST00000627460 PTPROQ16827 1216 aa9.03□□□□□ -0.96
CHD2-211ENST00000627460 ARL13BQ3SXY8 428 aa9.03□□□□□ -0.96
CHD2-211ENST00000627460 SLC25A52Q3SY17 297 aa9.03□□□□□ -0.96
CHD2-211ENST00000627460 RAB41Q5JT25 222 aa9.03□□□□□ -0.96
CHD2-211ENST00000627460 ACBD5Q5T8D3 534 aaPredicted RBP9.03□□□□□ -0.96
CHD2-211ENST00000627460 MFSD5Q6N075 450 aa9.03□□□□□ -0.96
CHD2-211ENST00000627460 FBXO38Q6PIJ6 1188 aa9.03□□□□□ -0.96
CHD2-211ENST00000627460 PHLDB2Q86SQ0 1253 aa9.03□□□□□ -0.96
CHD2-211ENST00000627460 SCUBE3Q8IX30 993 aa9.03□□□□□ -0.96
CHD2-211ENST00000627460 KLHL7Q8IXQ5 586 aa9.03□□□□□ -0.96
CHD2-211ENST00000627460 CMTR2Q8IYT2 770 aaKnown RBP9.03□□□□□ -0.96
CHD2-211ENST00000627460 CRIPAKQ8N1N5 446 aa9.03□□□□□ -0.96
CHD2-211ENST00000627460 GOLGA6L1Q8N7Z2 621 aa9.03□□□□□ -0.96
CHD2-211ENST00000627460 KCTD6Q8NC69 237 aa9.03□□□□□ -0.96
CHD2-211ENST00000627460 LRRN4CLQ8ND94 238 aa9.03□□□□□ -0.96
CHD2-211ENST00000627460 CMASQ8NFW8 434 aaPredicted RBP9.03□□□□□ -0.96
CHD2-211ENST00000627460 ATL2Q8NHH9 583 aa9.03□□□□□ -0.96
CHD2-211ENST00000627460 JOSD2Q8TAC2 188 aa9.03□□□□□ -0.96
CHD2-211ENST00000627460 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.03□□□□□ -0.96
CHD2-211ENST00000627460 MYLPFQ96A32 169 aa9.03□□□□□ -0.96
CHD2-211ENST00000627460 HAUS1Q96CS2 278 aa9.03□□□□□ -0.96
CHD2-211ENST00000627460 PAWRQ96IZ0 340 aaKnown RBP9.03□□□□□ -0.96
CHD2-211ENST00000627460 SLITRK1Q96PX8 696 aa9.03□□□□□ -0.96
CHD2-211ENST00000627460 AP1M1Q9BXS5 423 aa9.03□□□□□ -0.96
CHD2-211ENST00000627460 B3GNT5Q9BYG0 378 aa9.03□□□□□ -0.96
CHD2-211ENST00000627460 OSBPL7Q9BZF2 842 aa9.03□□□□□ -0.96
CHD2-211ENST00000627460 TRIM7Q9C029 511 aa9.03□□□□□ -0.96
CHD2-211ENST00000627460 NRDE2Q9H7Z3 1164 aa9.03□□□□□ -0.96
CHD2-211ENST00000627460 CRTAC1Q9NQ79 661 aa9.03□□□□□ -0.96
CHD2-211ENST00000627460 RNF19AQ9NV58 838 aa9.03□□□□□ -0.96
CHD2-211ENST00000627460 RCOR3Q9P2K3 495 aaPredicted RBP9.03□□□□□ -0.96
CHD2-211ENST00000627460 TSR3Q9UJK0 312 aaKnown RBP9.03□□□□□ -0.96
CHD2-211ENST00000627460 MAFFQ9ULX9 164 aa9.03□□□□□ -0.96
CHD2-211ENST00000627460 SSX2IPQ9Y2D8 614 aa9.03□□□□□ -0.96
CHD2-211ENST00000627460 NME7Q9Y5B8 376 aa9.03□□□□□ -0.96
CHD2-211ENST00000627460 PCDHB5Q9Y5E4 795 aa9.03□□□□□ -0.96
CHD2-211ENST00000627460 MYBPHLA2RUH7 354 aa9.02□□□□□ -0.97
CHD2-211ENST00000627460 DGKIO75912 1065 aa9.02□□□□□ -0.97
CHD2-211ENST00000627460 RTN3O95197 1032 aaPredicted RBP9.02□□□□□ -0.97
CHD2-211ENST00000627460 TRUB2O95900 331 aaKnown RBP9.02□□□□□ -0.97
CHD2-211ENST00000627460 RALAP11233 206 aa9.02□□□□□ -0.97
CHD2-211ENST00000627460 FGFR3P22607 806 aa9.02□□□□□ -0.97
CHD2-211ENST00000627460 TKTP29401 623 aaKnown RBP9.02□□□□□ -0.97
CHD2-211ENST00000627460 MIPP30301 263 aa9.02□□□□□ -0.97
CHD2-211ENST00000627460 CYP2C18P33260 490 aa9.02□□□□□ -0.97
CHD2-211ENST00000627460 COILP38432 576 aaPredicted RBP9.02□□□□□ -0.97
CHD2-211ENST00000627460 MAP3K7CLP57077 242 aa9.02□□□□□ -0.97
CHD2-211ENST00000627460 RPL10AP62906 217 aaKnown RBP9.02□□□□□ -0.97
CHD2-211ENST00000627460 SLC25A11Q02978 314 aaKnown RBP9.02□□□□□ -0.97
CHD2-211ENST00000627460 ZNF252P-AS1Q0IIN9 211 aa9.02□□□□□ -0.97
CHD2-211ENST00000627460 CALCOCO2Q13137 446 aa9.02□□□□□ -0.97
CHD2-211ENST00000627460 PPIGQ13427 754 aaKnown RBP eCLIP9.02□□□□□ -0.973e-6■□□□□ 9.8
CHD2-211ENST00000627460 KRT81Q14533 505 aa9.02□□□□□ -0.97
CHD2-211ENST00000627460 GPNMBQ14956 572 aa9.02□□□□□ -0.97
CHD2-211ENST00000627460 USP41Q3LFD5 358 aa9.02□□□□□ -0.97
CHD2-211ENST00000627460 CTXN3Q4LDR2 81 aa9.02□□□□□ -0.97
CHD2-211ENST00000627460 FAM171A1Q5VUB5 890 aa9.02□□□□□ -0.97
CHD2-211ENST00000627460 PM20D1Q6GTS8 502 aa9.02□□□□□ -0.97
CHD2-211ENST00000627460 FUT10Q6P4F1 479 aa9.02□□□□□ -0.97
CHD2-211ENST00000627460 CCDC137Q6PK04 289 aaKnown RBP9.02□□□□□ -0.97
CHD2-211ENST00000627460 BRICD5Q6PL45 260 aa9.02□□□□□ -0.97
CHD2-211ENST00000627460 CCNI2Q6ZMN8 369 aaPredicted RBP9.02□□□□□ -0.97
CHD2-211ENST00000627460 SPOCD1Q6ZMY3 1216 aa9.02□□□□□ -0.97
CHD2-211ENST00000627460 ZNF365Q70YC5 407 aa9.02□□□□□ -0.97
CHD2-211ENST00000627460 DEFB128Q7Z7B8 93 aa9.02□□□□□ -0.97
CHD2-211ENST00000627460 ZNF280BQ86YH2 543 aa9.02□□□□□ -0.97
CHD2-211ENST00000627460 CCDC89Q8N998 374 aa9.02□□□□□ -0.97
CHD2-211ENST00000627460 FAM172AQ8WUF8 416 aa9.02□□□□□ -0.97
CHD2-211ENST00000627460 CENPIQ92674 756 aaPredicted RBP9.02□□□□□ -0.97
CHD2-211ENST00000627460 GLMNQ92990 594 aa9.02□□□□□ -0.97
CHD2-211ENST00000627460 TOP1MTQ969P6 601 aa9.02□□□□□ -0.97
CHD2-211ENST00000627460 LRRC45Q96CN5 670 aa9.02□□□□□ -0.97
CHD2-211ENST00000627460 PGAP3Q96FM1 320 aaPredicted RBP9.02□□□□□ -0.97
CHD2-211ENST00000627460 SCLYQ96I15 445 aa9.02□□□□□ -0.97
CHD2-211ENST00000627460 C8orf48Q96LL4 319 aa9.02□□□□□ -0.97
CHD2-211ENST00000627460 PAAF1Q9BRP4 392 aa9.02□□□□□ -0.97
CHD2-211ENST00000627460 ZNF670Q9BS34 389 aa9.02□□□□□ -0.97
CHD2-211ENST00000627460 TTPALQ9BTX7 342 aa9.02□□□□□ -0.97
CHD2-211ENST00000627460 ZCWPW1Q9H0M4 648 aa9.02□□□□□ -0.97
CHD2-211ENST00000627460 DDX47Q9H0S4 455 aaKnown RBP9.02□□□□□ -0.97
CHD2-211ENST00000627460 MTIF3Q9H2K0 278 aaKnown RBP9.02□□□□□ -0.97
CHD2-211ENST00000627460 VIPAS39Q9H9C1 493 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms