RNA–Protein interactions for RNA: ENST00000623535.1

CDKL5-205, Transcript of cyclin dependent kinase like 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKL5, Length 12,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-205ENST00000623535 ARHGAP17Q68EM7 881 aa6.5□□□□□ -1.37
CDKL5-205ENST00000623535 PACS2Q86VP3 889 aa6.5□□□□□ -1.37
CDKL5-205ENST00000623535 MRPL50Q8N5N7 158 aaKnown RBP6.5□□□□□ -1.37
CDKL5-205ENST00000623535 PCYOX1LQ8NBM8 494 aa6.5□□□□□ -1.37
CDKL5-205ENST00000623535 C11orf84Q9BUA3 381 aaPredicted RBP6.5□□□□□ -1.37
CDKL5-205ENST00000623535 SH3BP4Q9P0V3 963 aa6.5□□□□□ -1.37
CDKL5-205ENST00000623535 DNMT3LQ9UJW3 386 aa6.5□□□□□ -1.37
CDKL5-205ENST00000623535 SPEF1Q9Y4P9 236 aa6.5□□□□□ -1.37
CDKL5-205ENST00000623535 ATP7AQ04656 1500 aa6.5□□□□□ -1.37
CDKL5-205ENST00000623535 TRIM64BA6NI03 449 aa6.5□□□□□ -1.37
CDKL5-205ENST00000623535 PGRMC1O00264 195 aaKnown RBP6.5□□□□□ -1.37
CDKL5-205ENST00000623535 KLK3P07288 261 aaPredicted RBP6.5□□□□□ -1.37
CDKL5-205ENST00000623535 JMJD7P0C870 316 aa6.5□□□□□ -1.37
CDKL5-205ENST00000623535 MLH1P40692 756 aa6.5□□□□□ -1.37
CDKL5-205ENST00000623535 SULT2A1Q06520 285 aa6.5□□□□□ -1.37
CDKL5-205ENST00000623535 TMEM62Q0P6H9 643 aa6.5□□□□□ -1.37
CDKL5-205ENST00000623535 GRM3Q14832 879 aa6.5□□□□□ -1.37
CDKL5-205ENST00000623535 ATF7IP2Q5U623 682 aa6.5□□□□□ -1.37
CDKL5-205ENST00000623535 FAM220AQ7Z4H9 259 aa6.5□□□□□ -1.37
CDKL5-205ENST00000623535 PSMA8Q8TAA3 256 aa6.5□□□□□ -1.37
CDKL5-205ENST00000623535 FAM45AQ8TCE6 357 aa6.5□□□□□ -1.37
CDKL5-205ENST00000623535 ZMYND12Q9H0C1 365 aa6.5□□□□□ -1.37
CDKL5-205ENST00000623535 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.5□□□□□ -1.37
CDKL5-205ENST00000623535 CDC23Q9UJX2 597 aa6.5□□□□□ -1.37
CDKL5-205ENST00000623535 ZNF232Q9UNY5 417 aa6.5□□□□□ -1.37
CDKL5-205ENST00000623535 SH3GLB1Q9Y371 365 aa6.5□□□□□ -1.37
CDKL5-205ENST00000623535 CDK12Q9NYV4 1490 aaPredicted RBP6.5□□□□□ -1.37
CDKL5-205ENST00000623535 CXCL11O14625 94 aa6.5□□□□□ -1.37
CDKL5-205ENST00000623535 KMOO15229 486 aa6.5□□□□□ -1.37
CDKL5-205ENST00000623535 MT-ND5P03915 603 aa6.5□□□□□ -1.37
CDKL5-205ENST00000623535 OR56A5P0C7T3 313 aa6.5□□□□□ -1.37
CDKL5-205ENST00000623535 LAG3P18627 525 aa6.5□□□□□ -1.37
CDKL5-205ENST00000623535 WARSP23381 471 aaKnown RBP6.5□□□□□ -1.37
CDKL5-205ENST00000623535 NTSP30990 170 aa6.5□□□□□ -1.37
CDKL5-205ENST00000623535 SLC30A9Q6PML9 568 aa6.5□□□□□ -1.37
CDKL5-205ENST00000623535 OR8D1Q8WZ84 308 aa6.5□□□□□ -1.37
CDKL5-205ENST00000623535 FAM117AQ9C073 453 aa6.5□□□□□ -1.37
CDKL5-205ENST00000623535 AURKCQ9UQB9 309 aa6.5□□□□□ -1.37
CDKL5-205ENST00000623535 PODXLO00592 558 aa6.5□□□□□ -1.37
CDKL5-205ENST00000623535 SEMA3DO95025 777 aa6.5□□□□□ -1.37
CDKL5-205ENST00000623535 HEXAP06865 529 aa6.5□□□□□ -1.37
CDKL5-205ENST00000623535 AP1S1P61966 158 aa6.5□□□□□ -1.37
CDKL5-205ENST00000623535 UBE3AQ05086 875 aa6.5□□□□□ -1.37
CDKL5-205ENST00000623535 UNQ6126/PRO20091Q6UXV3 157 aa6.5□□□□□ -1.37
CDKL5-205ENST00000623535 RDM1Q8NG50 284 aa6.5□□□□□ -1.37
CDKL5-205ENST00000623535 ZFP28Q8NHY6 868 aa6.5□□□□□ -1.37
CDKL5-205ENST00000623535 LSG1Q9H089 658 aaKnown RBP6.5□□□□□ -1.37
CDKL5-205ENST00000623535 WDCPQ9H6R7 721 aa6.5□□□□□ -1.37
CDKL5-205ENST00000623535 ZNF214Q9UL59 606 aaPredicted RBP6.5□□□□□ -1.37
CDKL5-205ENST00000623535 DUSP12Q9UNI6 340 aa6.5□□□□□ -1.37
CDKL5-205ENST00000623535 MAGI2Q86UL8 1455 aa6.5□□□□□ -1.37
CDKL5-205ENST00000623535 YWHABP31946 246 aaKnown RBP6.5□□□□□ -1.37
CDKL5-205ENST00000623535 CYP4F22Q6NT55 531 aa6.5□□□□□ -1.37
CDKL5-205ENST00000623535 NLRP10Q86W26 655 aa6.5□□□□□ -1.37
CDKL5-205ENST00000623535 ITCHQ96J02 903 aa6.5□□□□□ -1.37
CDKL5-205ENST00000623535 PANX3Q96QZ0 392 aa6.5□□□□□ -1.37
CDKL5-205ENST00000623535 OLFM1Q99784 485 aa6.5□□□□□ -1.37
CDKL5-205ENST00000623535 USP29Q9HBJ7 922 aa6.5□□□□□ -1.37
CDKL5-205ENST00000623535 IMPAD1Q9NX62 359 aa6.5□□□□□ -1.37
CDKL5-205ENST00000623535 ANAPC7Q9UJX3 599 aa6.5□□□□□ -1.37
CDKL5-205ENST00000623535 GPSM3Q9Y4H4 160 aa6.5□□□□□ -1.37
CDKL5-205ENST00000623535 CTTNBP2Q8WZ74 1663 aa6.5□□□□□ -1.37
CDKL5-205ENST00000623535 MIF4GDA9UHW6 222 aaKnown RBP6.5□□□□□ -1.37
CDKL5-205ENST00000623535 GJB1P08034 283 aa6.5□□□□□ -1.37
CDKL5-205ENST00000623535 PCNAP12004 261 aa6.5□□□□□ -1.37
CDKL5-205ENST00000623535 AP1S2P56377 157 aa6.5□□□□□ -1.37
CDKL5-205ENST00000623535 STK4Q13043 487 aa6.5□□□□□ -1.37
CDKL5-205ENST00000623535 ATXN7L2Q5T6C5 722 aaPredicted RBP6.5□□□□□ -1.37
CDKL5-205ENST00000623535 NUGGCQ68CJ6 796 aa6.5□□□□□ -1.37
CDKL5-205ENST00000623535 DPY30Q9C005 99 aa6.5□□□□□ -1.37
CDKL5-205ENST00000623535 TBC1D14Q9P2M4 693 aa6.5□□□□□ -1.37
CDKL5-205ENST00000623535 ABCA5Q8WWZ7 1642 aa6.5□□□□□ -1.37
CDKL5-205ENST00000623535 EIF4BP23588 611 aaKnown RBP6.49□□□□□ -1.37
CDKL5-205ENST00000623535 CNOT6LQ96LI5 555 aaKnown RBP6.49□□□□□ -1.37
CDKL5-205ENST00000623535 AVENQ9NQS1 362 aaPredicted RBP6.49□□□□□ -1.37
CDKL5-205ENST00000623535 SHANK2Q9UPX8 1470 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 DIAPH2O60879 1101 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 TGM2P21980 687 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 CATSPER3Q86XQ3 398 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 SAMD3Q8N6K7 520 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 LRMDAQ9H2I8 198 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 MAPRE3Q9UPY8 281 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 LAMTOR5O43504 91 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 NOL4O94818 638 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 ITGA8P53708 1063 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 NUDCD3Q8IVD9 361 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 ZNF579Q8NAF0 562 aaKnown RBP6.49□□□□□ -1.37
CDKL5-205ENST00000623535 FAM151AQ8WW52 585 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 C18orf8Q96DM3 657 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 ZNF717Q9BY31 904 aaPredicted RBP6.49□□□□□ -1.37
CDKL5-205ENST00000623535 RSPH9Q9H1X1 276 aaPredicted RBP6.49□□□□□ -1.37
CDKL5-205ENST00000623535 VTA1Q9NP79 307 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 ATAD3AQ9NVI7 634 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 POLRMTO00411 1230 aaKnown RBP6.49□□□□□ -1.37
CDKL5-205ENST00000623535 TLX3O43711 291 aaPredicted RBP6.49□□□□□ -1.37
CDKL5-205ENST00000623535 TYK2P29597 1187 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 CDH6P55285 790 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 CAV3P56539 151 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 COBLL1Q53SF7 1204 aa6.49□□□□□ -1.37
CDKL5-205ENST00000623535 GET4Q7L5D6 327 aaPredicted RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms