RNA–Protein interactions for RNA: ENST00000623466.1

PCDHB17P-202, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 3,066 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-202ENST00000623466 CETN2P41208 172 aa13.96□□□□□ -0.18
PCDHB17P-202ENST00000623466 DEUP1Q05D60 604 aa13.96□□□□□ -0.18
PCDHB17P-202ENST00000623466 ZNF252P-AS1Q0IIN9 211 aa13.96□□□□□ -0.18
PCDHB17P-202ENST00000623466 PTP4A2Q12974 167 aa13.96□□□□□ -0.18
PCDHB17P-202ENST00000623466 RCN2Q14257 317 aa13.96□□□□□ -0.18
PCDHB17P-202ENST00000623466 TSNAXIP1Q2TAA8 658 aa13.96□□□□□ -0.18
PCDHB17P-202ENST00000623466 RNASEH2BQ5TBB1 312 aaKnown RBP13.96□□□□□ -0.18
PCDHB17P-202ENST00000623466 RGS9BPQ6ZS82 235 aa13.96□□□□□ -0.18
PCDHB17P-202ENST00000623466 CEP128Q6ZU80 1094 aa13.96□□□□□ -0.18
PCDHB17P-202ENST00000623466 CENPUQ71F23 418 aa13.96□□□□□ -0.18
PCDHB17P-202ENST00000623466 APLFQ8IW19 511 aaPredicted RBP13.96□□□□□ -0.18
PCDHB17P-202ENST00000623466 UBA3Q8TBC4 463 aa13.96□□□□□ -0.18
PCDHB17P-202ENST00000623466 PYROXD1Q8WU10 500 aa13.96□□□□□ -0.18
PCDHB17P-202ENST00000623466 LENG1Q96BZ8 264 aaPredicted RBP13.96□□□□□ -0.18
PCDHB17P-202ENST00000623466 TTC25Q96NG3 672 aa13.96□□□□□ -0.18
PCDHB17P-202ENST00000623466 TSPAN18Q96SJ8 248 aa13.96□□□□□ -0.18
PCDHB17P-202ENST00000623466 CDT1Q9H211 546 aa13.96□□□□□ -0.18
PCDHB17P-202ENST00000623466 SMYD3Q9H7B4 428 aa13.96□□□□□ -0.18
PCDHB17P-202ENST00000623466 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.96□□□□□ -0.18
PCDHB17P-202ENST00000623466 RABGEF1Q9UJ41 708 aa13.96□□□□□ -0.18
PCDHB17P-202ENST00000623466 CPSF3Q9UKF6 684 aaKnown RBP13.96□□□□□ -0.18
PCDHB17P-202ENST00000623466 HES2Q9Y543 173 aa13.96□□□□□ -0.18
PCDHB17P-202ENST00000623466 TCRBV7S3A2A0A539 114 aa13.95□□□□□ -0.18
PCDHB17P-202ENST00000623466 LACTBL1A8MY62 500 aa13.95□□□□□ -0.18
PCDHB17P-202ENST00000623466 PDLIM1O00151 329 aa13.95□□□□□ -0.18
PCDHB17P-202ENST00000623466 CAPN9O14815 690 aa13.95□□□□□ -0.18
PCDHB17P-202ENST00000623466 GRAP2O75791 330 aa13.95□□□□□ -0.18
PCDHB17P-202ENST00000623466 PIGRP01833 764 aa13.95□□□□□ -0.18
PCDHB17P-202ENST00000623466 SERPINB4P48594 390 aa13.95□□□□□ -0.18
PCDHB17P-202ENST00000623466 HIF1AQ16665 826 aa13.95□□□□□ -0.18
PCDHB17P-202ENST00000623466 TDRPQ86YL5 185 aa13.95□□□□□ -0.18
PCDHB17P-202ENST00000623466 FEZF2Q8TBJ5 459 aa13.95□□□□□ -0.18
PCDHB17P-202ENST00000623466 SCG3Q8WXD2 468 aaKnown RBP13.95□□□□□ -0.18
PCDHB17P-202ENST00000623466 PAFAH2Q99487 392 aa13.95□□□□□ -0.18
PCDHB17P-202ENST00000623466 LPIN3Q9BQK8 851 aa13.95□□□□□ -0.18
PCDHB17P-202ENST00000623466 FAM49AQ9H0Q0 323 aaPredicted RBP13.95□□□□□ -0.18
PCDHB17P-202ENST00000623466 SDCBP2Q9H190 292 aa13.95□□□□□ -0.18
PCDHB17P-202ENST00000623466 PAPPA2Q9BXP8 1791 aa13.95□□□□□ -0.18
PCDHB17P-202ENST00000623466 GYG2O15488 501 aa13.95□□□□□ -0.18
PCDHB17P-202ENST00000623466 HAUS5O94927 633 aa13.95□□□□□ -0.18
PCDHB17P-202ENST00000623466 TJP3O95049 919 aa13.95□□□□□ -0.18
PCDHB17P-202ENST00000623466 TROVE2P10155 538 aaKnown RBP eCLIP13.95□□□□□ -0.18
PCDHB17P-202ENST00000623466 ADORA2AP29274 412 aa13.95□□□□□ -0.18
PCDHB17P-202ENST00000623466 RFC1P35251 1148 aaPredicted RBP13.95□□□□□ -0.18
PCDHB17P-202ENST00000623466 GEMIN4P57678 1058 aaKnown RBP13.95□□□□□ -0.18
PCDHB17P-202ENST00000623466 BBS9Q3SYG4 887 aa13.95□□□□□ -0.18
PCDHB17P-202ENST00000623466 MDH1BQ5I0G3 518 aa13.95□□□□□ -0.18
PCDHB17P-202ENST00000623466 ZC3H18Q86VM9 953 aaKnown RBP13.95□□□□□ -0.18
PCDHB17P-202ENST00000623466 RNF168Q8IYW5 571 aaPredicted RBP13.95□□□□□ -0.18
PCDHB17P-202ENST00000623466 ZNF276Q8N554 614 aa13.95□□□□□ -0.18
PCDHB17P-202ENST00000623466 JOSD2Q8TAC2 188 aa13.95□□□□□ -0.18
PCDHB17P-202ENST00000623466 TRIM11Q96F44 468 aa13.95□□□□□ -0.18
PCDHB17P-202ENST00000623466 WDR83Q9BRX9 315 aaKnown RBP13.95□□□□□ -0.18
PCDHB17P-202ENST00000623466 MRPL47Q9HD33 250 aaKnown RBP13.95□□□□□ -0.18
PCDHB17P-202ENST00000623466 DMAP1Q9NPF5 467 aaPredicted RBP13.95□□□□□ -0.18
PCDHB17P-202ENST00000623466 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.94□□□□□ -0.18
PCDHB17P-202ENST00000623466 GSC2O15499 205 aa13.94□□□□□ -0.18
PCDHB17P-202ENST00000623466 TBX10O75333 385 aa13.94□□□□□ -0.18
PCDHB17P-202ENST00000623466 USP46P62068 366 aa13.94□□□□□ -0.18
PCDHB17P-202ENST00000623466 TAF5Q15542 800 aa13.94□□□□□ -0.18
PCDHB17P-202ENST00000623466 JADE1Q6IE81 842 aa13.94□□□□□ -0.18
PCDHB17P-202ENST00000623466 PLEKHA7Q6IQ23 1121 aa13.94□□□□□ -0.18
PCDHB17P-202ENST00000623466 SPOCD1Q6ZMY3 1216 aa13.94□□□□□ -0.18
PCDHB17P-202ENST00000623466 VPS52Q8N1B4 723 aa13.94□□□□□ -0.18
PCDHB17P-202ENST00000623466 TTC17Q96AE7 1141 aa13.94□□□□□ -0.18
PCDHB17P-202ENST00000623466 MCUR1Q96AQ8 359 aa13.94□□□□□ -0.18
PCDHB17P-202ENST00000623466 ZNF333Q96JL9 665 aa13.94□□□□□ -0.18
PCDHB17P-202ENST00000623466 MANSC1Q9H8J5 431 aa13.94□□□□□ -0.18
PCDHB17P-202ENST00000623466 IFT122Q9HBG6 1241 aa13.94□□□□□ -0.18
PCDHB17P-202ENST00000623466 SCOCQ9UIL1 159 aa13.94□□□□□ -0.18
PCDHB17P-202ENST00000623466 LOC285556D6RIA3 1793 aa13.94□□□□□ -0.18
PCDHB17P-202ENST00000623466 TRAFD1O14545 582 aaPredicted RBP13.94□□□□□ -0.18
PCDHB17P-202ENST00000623466 CXCL11O14625 94 aa13.94□□□□□ -0.18
PCDHB17P-202ENST00000623466 EFNA5P52803 228 aa13.94□□□□□ -0.18
PCDHB17P-202ENST00000623466 MXD4Q14582 209 aaPredicted RBP13.94□□□□□ -0.18
PCDHB17P-202ENST00000623466 MORF4L2Q15014 288 aa13.94□□□□□ -0.18
PCDHB17P-202ENST00000623466 RASIP1Q5U651 963 aa13.94□□□□□ -0.18
PCDHB17P-202ENST00000623466 OR52E8Q6IFG1 317 aa13.94□□□□□ -0.18
PCDHB17P-202ENST00000623466 MPZL3Q6UWV2 235 aa13.94□□□□□ -0.18
PCDHB17P-202ENST00000623466 ZPBP2Q6X784 338 aa13.94□□□□□ -0.18
PCDHB17P-202ENST00000623466 CCNJLQ8IV13 435 aa13.94□□□□□ -0.18
PCDHB17P-202ENST00000623466 C1orf127Q8N9H9 656 aa13.94□□□□□ -0.18
PCDHB17P-202ENST00000623466 BTBD10Q9BSF8 475 aa13.94□□□□□ -0.18
PCDHB17P-202ENST00000623466 XYLT2Q9H1B5 865 aa13.94□□□□□ -0.18
PCDHB17P-202ENST00000623466 SIX4Q9UIU6 781 aa13.94□□□□□ -0.18
PCDHB17P-202ENST00000623466 E7ENQ6 273 aa13.94□□□□□ -0.18
PCDHB17P-202ENST00000623466 MAP3K6O95382 1288 aa13.94□□□□□ -0.18
PCDHB17P-202ENST00000623466 STAG3L1P0CL83 205 aa13.94□□□□□ -0.18
PCDHB17P-202ENST00000623466 MMP8P22894 467 aa13.94□□□□□ -0.18
PCDHB17P-202ENST00000623466 GJA8P48165 433 aa13.94□□□□□ -0.18
PCDHB17P-202ENST00000623466 ARFIP2P53365 341 aa13.94□□□□□ -0.18
PCDHB17P-202ENST00000623466 VCPP55072 806 aaKnown RBP13.94□□□□□ -0.18
PCDHB17P-202ENST00000623466 LMNB2Q03252 620 aa13.94□□□□□ -0.18
PCDHB17P-202ENST00000623466 TTLL4Q14679 1199 aa13.94□□□□□ -0.18
PCDHB17P-202ENST00000623466 KIZQ2M2Z5 673 aa13.94□□□□□ -0.18
PCDHB17P-202ENST00000623466 SH3PXD2AQ5TCZ1 1133 aa13.94□□□□□ -0.18
PCDHB17P-202ENST00000623466 DPY19L2Q6NUT2 758 aa13.94□□□□□ -0.18
PCDHB17P-202ENST00000623466 DNAJC24Q6P3W2 148 aa13.94□□□□□ -0.18
PCDHB17P-202ENST00000623466 WDR49Q8IV35 697 aa13.94□□□□□ -0.18
PCDHB17P-202ENST00000623466 RCOR2Q8IZ40 523 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms