RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 ZBTB7AO95365 584 aa10.01□□□□□ -0.81
IGHV3-54-201ENST00000622166 PGK2P07205 417 aa10.01□□□□□ -0.81
IGHV3-54-201ENST00000622166 INHBAP08476 426 aa10.01□□□□□ -0.81
IGHV3-54-201ENST00000622166 TXNP10599 105 aaKnown RBP10.01□□□□□ -0.81
IGHV3-54-201ENST00000622166 INSRRP14616 1297 aa10.01□□□□□ -0.81
IGHV3-54-201ENST00000622166 GNAZP19086 355 aa10.01□□□□□ -0.81
IGHV3-54-201ENST00000622166 IL4RP24394 825 aa10.01□□□□□ -0.81
IGHV3-54-201ENST00000622166 PRKCHP24723 683 aa10.01□□□□□ -0.81
IGHV3-54-201ENST00000622166 TARSP26639 723 aaKnown RBP10.01□□□□□ -0.81
IGHV3-54-201ENST00000622166 SCNN1AP37088 669 aa10.01□□□□□ -0.81
IGHV3-54-201ENST00000622166 ARHGAP1Q07960 439 aa10.01□□□□□ -0.81
IGHV3-54-201ENST00000622166 LAMC2Q13753 1193 aa10.01□□□□□ -0.81
IGHV3-54-201ENST00000622166 PRKG1Q13976 671 aa10.01□□□□□ -0.81
IGHV3-54-201ENST00000622166 KRT81Q14533 505 aa10.01□□□□□ -0.81
IGHV3-54-201ENST00000622166 TTLL4Q14679 1199 aa10.01□□□□□ -0.81
IGHV3-54-201ENST00000622166 KCTD2Q14681 263 aa10.01□□□□□ -0.81
IGHV3-54-201ENST00000622166 CRYMQ14894 314 aa10.01□□□□□ -0.81
IGHV3-54-201ENST00000622166 KRT72Q14CN4 511 aa10.01□□□□□ -0.81
IGHV3-54-201ENST00000622166 PRKD1Q15139 912 aaPredicted RBP10.01□□□□□ -0.81
IGHV3-54-201ENST00000622166 KBTBD12Q3ZCT8 623 aa10.01□□□□□ -0.81
IGHV3-54-201ENST00000622166 PLEKHG4Q58EX7 1191 aa10.01□□□□□ -0.81
IGHV3-54-201ENST00000622166 SH3PXD2AQ5TCZ1 1133 aa10.01□□□□□ -0.81
IGHV3-54-201ENST00000622166 CLNKQ7Z7G1 428 aa10.01□□□□□ -0.81
IGHV3-54-201ENST00000622166 SLC26A11Q86WA9 606 aa10.01□□□□□ -0.81
IGHV3-54-201ENST00000622166 ERO1BQ86YB8 467 aa10.01□□□□□ -0.81
IGHV3-54-201ENST00000622166 CDKL3Q8IVW4 592 aaPredicted RBP10.01□□□□□ -0.81
IGHV3-54-201ENST00000622166 TRIM42Q8IWZ5 723 aa10.01□□□□□ -0.81
IGHV3-54-201ENST00000622166 ENDOVQ8N8Q3 282 aaKnown RBP10.01□□□□□ -0.81
IGHV3-54-201ENST00000622166 FAM13CQ8NE31 585 aa10.01□□□□□ -0.81
IGHV3-54-201ENST00000622166 SHCBP1Q8NEM2 672 aa10.01□□□□□ -0.81
IGHV3-54-201ENST00000622166 RFWD2Q8NHY2 731 aa10.01□□□□□ -0.81
IGHV3-54-201ENST00000622166 FBXO41Q8TF61 875 aa10.01□□□□□ -0.81
IGHV3-54-201ENST00000622166 STK32AQ8WU08 396 aa10.01□□□□□ -0.81
IGHV3-54-201ENST00000622166 CNKSR2Q8WXI2 1034 aa10.01□□□□□ -0.81
IGHV3-54-201ENST00000622166 KHSRPQ92945 711 aaKnown RBP eCLIP10.01□□□□□ -0.81
IGHV3-54-201ENST00000622166 ZNF668Q96K58 619 aaPredicted RBP10.01□□□□□ -0.81
IGHV3-54-201ENST00000622166 TSSK1BQ9BXA7 367 aa10.01□□□□□ -0.81
IGHV3-54-201ENST00000622166 NT5C1AQ9BXI3 368 aa10.01□□□□□ -0.81
IGHV3-54-201ENST00000622166 TBC1D10AQ9BXI6 508 aa10.01□□□□□ -0.81
IGHV3-54-201ENST00000622166 TRIM55Q9BYV6 548 aa10.01□□□□□ -0.81
IGHV3-54-201ENST00000622166 RNPEPQ9H4A4 650 aa10.01□□□□□ -0.81
IGHV3-54-201ENST00000622166 MROH8Q9H579 483 aa10.01□□□□□ -0.81
IGHV3-54-201ENST00000622166 RNPEPL1Q9HAU8 725 aa10.01□□□□□ -0.81
IGHV3-54-201ENST00000622166 POPDC2Q9HBU9 364 aa10.01□□□□□ -0.81
IGHV3-54-201ENST00000622166 NPHS2Q9NP85 383 aa10.01□□□□□ -0.81
IGHV3-54-201ENST00000622166 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.01□□□□□ -0.81
IGHV3-54-201ENST00000622166 DPP3Q9NY33 737 aa10.01□□□□□ -0.81
IGHV3-54-201ENST00000622166 SLC5A4Q9NY91 659 aa10.01□□□□□ -0.81
IGHV3-54-201ENST00000622166 ERAP1Q9NZ08 941 aa10.01□□□□□ -0.81
IGHV3-54-201ENST00000622166 DERAQ9Y315 318 aa10.01□□□□□ -0.81
IGHV3-54-201ENST00000622166 MCM3APO60318 1980 aa10.01□□□□□ -0.81
IGHV3-54-201ENST00000622166 A0A087WZ62 844 aa10□□□□□ -0.81
IGHV3-54-201ENST00000622166 RBM47A0AV96 593 aaKnown RBP10□□□□□ -0.81
IGHV3-54-201ENST00000622166 E5RJQ4 531 aa10□□□□□ -0.81
IGHV3-54-201ENST00000622166 MDM4O15151 490 aa10□□□□□ -0.81
IGHV3-54-201ENST00000622166 DIAPH2O60879 1101 aa10□□□□□ -0.81
IGHV3-54-201ENST00000622166 GCATO75600 419 aa10□□□□□ -0.81
IGHV3-54-201ENST00000622166 CAPN15O75808 1086 aa10□□□□□ -0.81
IGHV3-54-201ENST00000622166 HAUS5O94927 633 aa10□□□□□ -0.81
IGHV3-54-201ENST00000622166 LMNAP02545 664 aaKnown RBP10□□□□□ -0.81
IGHV3-54-201ENST00000622166 SNRPAP09012 282 aaKnown RBP10□□□□□ -0.81
IGHV3-54-201ENST00000622166 ZFXP17010 805 aaPredicted RBP10□□□□□ -0.81
IGHV3-54-201ENST00000622166 ARF4P18085 180 aaPredicted RBP10□□□□□ -0.81
IGHV3-54-201ENST00000622166 TPSB2P20231 275 aa10□□□□□ -0.81
IGHV3-54-201ENST00000622166 CALB2P22676 271 aa10□□□□□ -0.81
IGHV3-54-201ENST00000622166 GRM5P41594 1212 aa10□□□□□ -0.81
IGHV3-54-201ENST00000622166 MAGEA3P43357 314 aa10□□□□□ -0.81
IGHV3-54-201ENST00000622166 PTPN9P43378 593 aa10□□□□□ -0.81
IGHV3-54-201ENST00000622166 IREB2P48200 963 aaKnown RBP10□□□□□ -0.81
IGHV3-54-201ENST00000622166 ARFIP2P53365 341 aa10□□□□□ -0.81
IGHV3-54-201ENST00000622166 SNX16P57768 344 aa10□□□□□ -0.81
IGHV3-54-201ENST00000622166 YWHAGP61981 247 aaKnown RBP eCLIP10□□□□□ -0.81
IGHV3-54-201ENST00000622166 CDK16Q00536 496 aa10□□□□□ -0.81
IGHV3-54-201ENST00000622166 SLC6A3Q01959 620 aa10□□□□□ -0.81
IGHV3-54-201ENST00000622166 TPSAB1Q15661 275 aa10□□□□□ -0.81
IGHV3-54-201ENST00000622166 C15orf59Q2T9L4 293 aaPredicted RBP10□□□□□ -0.81
IGHV3-54-201ENST00000622166 GOLGA7BQ2TAP0 167 aa10□□□□□ -0.81
IGHV3-54-201ENST00000622166 Q3C1V9 767 aa10□□□□□ -0.81
IGHV3-54-201ENST00000622166 RAB6CQ53S08 254 aa10□□□□□ -0.81
IGHV3-54-201ENST00000622166 TAF1BQ53T94 588 aaPredicted RBP10□□□□□ -0.81
IGHV3-54-201ENST00000622166 LGSNQ5TDP6 509 aa10□□□□□ -0.81
IGHV3-54-201ENST00000622166 ARHGAP17Q68EM7 881 aa10□□□□□ -0.81
IGHV3-54-201ENST00000622166 C1orf228Q6PIY5 440 aa10□□□□□ -0.81
IGHV3-54-201ENST00000622166 OLFML1Q6UWY5 402 aa10□□□□□ -0.81
IGHV3-54-201ENST00000622166 CYS1Q717R9 158 aa10□□□□□ -0.81
IGHV3-54-201ENST00000622166 TMEM110Q86TL2 294 aa10□□□□□ -0.81
IGHV3-54-201ENST00000622166 ZC3H18Q86VM9 953 aaKnown RBP10□□□□□ -0.81
IGHV3-54-201ENST00000622166 SESTD1Q86VW0 696 aa10□□□□□ -0.81
IGHV3-54-201ENST00000622166 ZDHHC17Q8IUH5 632 aa10□□□□□ -0.81
IGHV3-54-201ENST00000622166 FBXO16Q8IX29 292 aaPredicted RBP10□□□□□ -0.81
IGHV3-54-201ENST00000622166 TMEM130Q8N3G9 435 aa10□□□□□ -0.81
IGHV3-54-201ENST00000622166 DDX51Q8N8A6 666 aaKnown RBP eCLIP10□□□□□ -0.81
IGHV3-54-201ENST00000622166 GPATCH11Q8N954 259 aa10□□□□□ -0.81
IGHV3-54-201ENST00000622166 PCDH19Q8TAB3 1148 aa10□□□□□ -0.81
IGHV3-54-201ENST00000622166 TRAF3IP1Q8TDR0 691 aaPredicted RBP10□□□□□ -0.81
IGHV3-54-201ENST00000622166 PTPRN2Q92932 1015 aa10□□□□□ -0.81
IGHV3-54-201ENST00000622166 SKA1Q96BD8 255 aa10□□□□□ -0.81
IGHV3-54-201ENST00000622166 PTCD3Q96EY7 689 aaKnown RBP10□□□□□ -0.81
IGHV3-54-201ENST00000622166 NSL1Q96IY1 281 aa10□□□□□ -0.81
IGHV3-54-201ENST00000622166 ACAP3Q96P50 834 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms