RNA–Protein interactions for RNA: ENST00000620394.1

SRRT-218, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-218ENST00000620394 TNFRSF10BO14763 440 aa23.37■■□□□ 1.33
SRRT-218ENST00000620394 SPINK2P20155 84 aa23.37■■□□□ 1.33
SRRT-218ENST00000620394 ASPAP45381 313 aa23.37■■□□□ 1.33
SRRT-218ENST00000620394 GAB4Q2WGN9 574 aa23.37■■□□□ 1.33
SRRT-218ENST00000620394 CEP135Q66GS9 1140 aa23.37■■□□□ 1.33
SRRT-218ENST00000620394 ANO7Q6IWH7 933 aa23.37■■□□□ 1.33
SRRT-218ENST00000620394 FUKQ8N0W3 1084 aa23.37■■□□□ 1.33
SRRT-218ENST00000620394 GUF1Q8N442 669 aaKnown RBP23.37■■□□□ 1.33
SRRT-218ENST00000620394 USP33Q8TEY7 942 aa23.37■■□□□ 1.33
SRRT-218ENST00000620394 GATA6Q92908 595 aa23.37■■□□□ 1.33
SRRT-218ENST00000620394 CCDC47Q96A33 483 aaKnown RBP23.37■■□□□ 1.33
SRRT-218ENST00000620394 ELMO3Q96BJ8 720 aa23.37■■□□□ 1.33
SRRT-218ENST00000620394 LINC00597Q9H2U6 94 aa23.37■■□□□ 1.33
SRRT-218ENST00000620394 GOLPH3LQ9H4A5 285 aa23.37■■□□□ 1.33
SRRT-218ENST00000620394 CPQQ9Y646 472 aa23.37■■□□□ 1.33
SRRT-218ENST00000620394 PLXND1Q9Y4D7 1925 aa23.37■■□□□ 1.33
SRRT-218ENST00000620394 CDX4O14627 284 aaPredicted RBP23.36■■□□□ 1.33
SRRT-218ENST00000620394 NR2F2P24468 414 aa23.36■■□□□ 1.33
SRRT-218ENST00000620394 YWHAQP27348 245 aa23.36■■□□□ 1.33
SRRT-218ENST00000620394 ZCWPW2Q504Y3 356 aa23.36■■□□□ 1.33
SRRT-218ENST00000620394 SNX30Q5VWJ9 437 aa23.36■■□□□ 1.33
SRRT-218ENST00000620394 UNC93AQ86WB7 457 aa23.36■■□□□ 1.33
SRRT-218ENST00000620394 CRYBG2Q8N1P7 616 aa23.36■■□□□ 1.33
SRRT-218ENST00000620394 KCNK16Q96T55 309 aa23.36■■□□□ 1.33
SRRT-218ENST00000620394 SCNM1Q9BWG6 230 aa23.36■■□□□ 1.33
SRRT-218ENST00000620394 KRT82Q9NSB4 513 aa23.36■■□□□ 1.33
SRRT-218ENST00000620394 HMGXB4Q9UGU5 601 aa23.36■■□□□ 1.33
SRRT-218ENST00000620394 EVLQ9UI08 416 aaPredicted RBP23.36■■□□□ 1.33
SRRT-218ENST00000620394 MMP17Q9ULZ9 603 aa23.36■■□□□ 1.33
SRRT-218ENST00000620394 INVSQ9Y283 1065 aa23.36■■□□□ 1.33
SRRT-218ENST00000620394 PATE3B3GLJ2 98 aa23.35■■□□□ 1.33
SRRT-218ENST00000620394 HLA-DRAP01903 254 aa23.35■■□□□ 1.33
SRRT-218ENST00000620394 CYP17A1P05093 508 aa23.35■■□□□ 1.33
SRRT-218ENST00000620394 BCKDHBP21953 392 aa23.35■■□□□ 1.33
SRRT-218ENST00000620394 OPRD1P41143 372 aa23.35■■□□□ 1.33
SRRT-218ENST00000620394 PIK3CAP42336 1068 aa23.35■■□□□ 1.33
SRRT-218ENST00000620394 DHPSP49366 369 aaPredicted RBP23.35■■□□□ 1.33
SRRT-218ENST00000620394 TUBP50607 506 aa23.35■■□□□ 1.33
SRRT-218ENST00000620394 VAMP7P51809 220 aa23.35■■□□□ 1.33
SRRT-218ENST00000620394 SLC5A3P53794 718 aa23.35■■□□□ 1.33
SRRT-218ENST00000620394 MCCD1P59942 119 aaPredicted RBP23.35■■□□□ 1.33
SRRT-218ENST00000620394 INCA1Q0VD86 236 aa23.35■■□□□ 1.33
SRRT-218ENST00000620394 LMAN2Q12907 356 aa23.35■■□□□ 1.33
SRRT-218ENST00000620394 INTS8Q75QN2 995 aaKnown RBP23.35■■□□□ 1.33
SRRT-218ENST00000620394 ACOT1Q86TX2 421 aa23.35■■□□□ 1.33
SRRT-218ENST00000620394 DDX42Q86XP3 938 aaKnown RBP eCLIP23.35■■□□□ 1.33
SRRT-218ENST00000620394 MDGA1Q8NFP4 955 aa23.35■■□□□ 1.33
SRRT-218ENST00000620394 FBXO32Q969P5 355 aa23.35■■□□□ 1.33
SRRT-218ENST00000620394 ZFRQ96KR1 1074 aaKnown RBP23.35■■□□□ 1.33
SRRT-218ENST00000620394 CSNK1G1Q9HCP0 422 aa23.35■■□□□ 1.33
SRRT-218ENST00000620394 COMMD8Q9NX08 183 aa23.35■■□□□ 1.33
SRRT-218ENST00000620394 MYOFQ9NZM1 2061 aa23.34■■□□□ 1.33
SRRT-218ENST00000620394 SLC9A3R1O14745 358 aaPredicted RBP23.34■■□□□ 1.33
SRRT-218ENST00000620394 CLSTN1O94985 981 aa23.34■■□□□ 1.33
SRRT-218ENST00000620394 ZDHHC11BP0C7U3 371 aa23.34■■□□□ 1.33
SRRT-218ENST00000620394 NDST1P52848 882 aa23.34■■□□□ 1.33
SRRT-218ENST00000620394 IFRD2Q12894 506 aaPredicted RBP23.34■■□□□ 1.33
SRRT-218ENST00000620394 FILIP1Q7Z7B0 1213 aa23.34■■□□□ 1.33
SRRT-218ENST00000620394 ZMIZ2Q8NF64 920 aa23.34■■□□□ 1.33
SRRT-218ENST00000620394 SCAMP5Q8TAC9 235 aa23.34■■□□□ 1.33
SRRT-218ENST00000620394 ZCCHC14Q8WYQ9 949 aaKnown RBP23.34■■□□□ 1.33
SRRT-218ENST00000620394 SPACA7Q96KW9 195 aa23.34■■□□□ 1.33
SRRT-218ENST00000620394 DUSP9Q99956 384 aaKnown RBP23.34■■□□□ 1.33
SRRT-218ENST00000620394 MED10Q9BTT4 135 aa23.34■■□□□ 1.33
SRRT-218ENST00000620394 ASPMQ8IZT6 3477 aa23.34■■□□□ 1.33
SRRT-218ENST00000620394 ASCC3Q8N3C0 2202 aaKnown RBP23.33■■□□□ 1.33
SRRT-218ENST00000620394 AP1G2O75843 785 aa23.33■■□□□ 1.33
SRRT-218ENST00000620394 ZNF202O95125 648 aa23.33■■□□□ 1.33
SRRT-218ENST00000620394 CCDC130P13994 396 aa23.33■■□□□ 1.33
SRRT-218ENST00000620394 SEC13P55735 322 aa23.33■■□□□ 1.33
SRRT-218ENST00000620394 IRX4P78413 519 aa23.33■■□□□ 1.33
SRRT-218ENST00000620394 C2orf27AQ580R0 203 aa23.33■■□□□ 1.33
SRRT-218ENST00000620394 SPOPLQ6IQ16 392 aa23.33■■□□□ 1.33
SRRT-218ENST00000620394 DEFB124Q8NES8 71 aa23.33■■□□□ 1.33
SRRT-218ENST00000620394 SMOQ99835 787 aa23.33■■□□□ 1.33
SRRT-218ENST00000620394 SMPD4Q9NXE4 827 aa23.33■■□□□ 1.33
SRRT-218ENST00000620394 K7EQS6 105 aa23.32■■□□□ 1.32
SRRT-218ENST00000620394 COCHO43405 550 aa23.32■■□□□ 1.32
SRRT-218ENST00000620394 ALDH1A2O94788 518 aa23.32■■□□□ 1.32
SRRT-218ENST00000620394 TOP3BO95985 862 aaKnown RBP23.32■■□□□ 1.32
SRRT-218ENST00000620394 ABL1P00519 1130 aa23.32■■□□□ 1.32
SRRT-218ENST00000620394 TRIM49P0CI25 452 aa23.32■■□□□ 1.32
SRRT-218ENST00000620394 TRIM49CP0CI26 452 aa23.32■■□□□ 1.32
SRRT-218ENST00000620394 MBL2P11226 248 aaPredicted RBP23.32■■□□□ 1.32
SRRT-218ENST00000620394 EIF2DP41214 584 aaKnown RBP23.32■■□□□ 1.32
SRRT-218ENST00000620394 DPP6P42658 865 aa23.32■■□□□ 1.32
SRRT-218ENST00000620394 CRY1Q16526 586 aa23.32■■□□□ 1.32
SRRT-218ENST00000620394 UAP1L1Q3KQV9 507 aa23.32■■□□□ 1.32
SRRT-218ENST00000620394 TRIM61Q5EBN2 209 aa23.32■■□□□ 1.32
SRRT-218ENST00000620394 ADGRG2Q8IZP9 1017 aa23.32■■□□□ 1.32
SRRT-218ENST00000620394 OLIG1Q8TAK6 271 aa23.32■■□□□ 1.32
SRRT-218ENST00000620394 SLC2A14Q8TDB8 520 aa23.32■■□□□ 1.32
SRRT-218ENST00000620394 PIGKQ92643 395 aa23.32■■□□□ 1.32
SRRT-218ENST00000620394 NUSAP1Q9BXS6 441 aaKnown RBP23.32■■□□□ 1.32
SRRT-218ENST00000620394 SLC32A1Q9H598 525 aa23.32■■□□□ 1.32
SRRT-218ENST00000620394 CFAP97Q9P2B7 532 aa23.32■■□□□ 1.32
SRRT-218ENST00000620394 NEUROG3Q9Y4Z2 214 aa23.32■■□□□ 1.32
SRRT-218ENST00000620394 GTF3C3Q9Y5Q9 886 aa23.32■■□□□ 1.32
SRRT-218ENST00000620394 SPEGQ15772 3267 aa23.32■■□□□ 1.32
SRRT-218ENST00000620394 SRRM3A6NNA2 597 aaPredicted RBP23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms