RNA–Protein interactions for RNA: ENST00000616944.4

CBWD1-225, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-225ENST00000616944 DENND5BQ6ZUT9 1274 aa15.9■□□□□ 0.14
CBWD1-225ENST00000616944 HFE2Q6ZVN8 426 aa15.9■□□□□ 0.14
CBWD1-225ENST00000616944 HES6Q96HZ4 224 aa15.9■□□□□ 0.14
CBWD1-225ENST00000616944 SLC2A13Q96QE2 648 aa15.9■□□□□ 0.14
CBWD1-225ENST00000616944 TTLL2Q9BWV7 592 aa15.9■□□□□ 0.14
CBWD1-225ENST00000616944 EMILIN2Q9BXX0 1053 aa15.9■□□□□ 0.14
CBWD1-225ENST00000616944 CYP4F11Q9HBI6 524 aa15.9■□□□□ 0.14
CBWD1-225ENST00000616944 FBXW11Q9UKB1 542 aa15.9■□□□□ 0.14
CBWD1-225ENST00000616944 YIPF1Q9Y548 306 aa15.9■□□□□ 0.14
CBWD1-225ENST00000616944 CTAGE9A4FU28 777 aa15.9■□□□□ 0.14
CBWD1-225ENST00000616944 LTFP02788 710 aa15.9■□□□□ 0.14
CBWD1-225ENST00000616944 GPD1P21695 349 aa15.9■□□□□ 0.14
CBWD1-225ENST00000616944 CASQ1P31415 396 aa15.9■□□□□ 0.14
CBWD1-225ENST00000616944 SLC1A1P43005 524 aa15.9■□□□□ 0.14
CBWD1-225ENST00000616944 PTPN9P43378 593 aa15.9■□□□□ 0.14
CBWD1-225ENST00000616944 RNASE9P60153 205 aaKnown RBP15.9■□□□□ 0.14
CBWD1-225ENST00000616944 SMAD3P84022 425 aaKnown RBP15.9■□□□□ 0.14
CBWD1-225ENST00000616944 PAPD7Q5XG87 772 aaKnown RBP15.9■□□□□ 0.14
CBWD1-225ENST00000616944 PDE12Q6L8Q7 609 aaKnown RBP15.9■□□□□ 0.14
CBWD1-225ENST00000616944 PEX26Q7Z412 305 aa15.9■□□□□ 0.14
CBWD1-225ENST00000616944 ARFGAP1Q8N6T3 406 aa15.9■□□□□ 0.14
CBWD1-225ENST00000616944 KIF18AQ8NI77 898 aa15.9■□□□□ 0.14
CBWD1-225ENST00000616944 GPR152Q8TDT2 470 aa15.9■□□□□ 0.14
CBWD1-225ENST00000616944 UBE2Q2Q8WVN8 375 aa15.9■□□□□ 0.14
CBWD1-225ENST00000616944 RXFP2Q8WXD0 754 aa15.9■□□□□ 0.14
CBWD1-225ENST00000616944 NT5C3BQ969T7 300 aa15.9■□□□□ 0.14
CBWD1-225ENST00000616944 ADAM33Q9BZ11 813 aa15.9■□□□□ 0.14
CBWD1-225ENST00000616944 FBXO44Q9H4M3 255 aa15.9■□□□□ 0.14
CBWD1-225ENST00000616944 SLC28A3Q9HAS3 691 aa15.9■□□□□ 0.14
CBWD1-225ENST00000616944 COMMD8Q9NX08 183 aa15.9■□□□□ 0.14
CBWD1-225ENST00000616944 PACSIN2Q9UNF0 486 aaPredicted RBP15.9■□□□□ 0.14
CBWD1-225ENST00000616944 SCML2Q9UQR0 700 aa15.9■□□□□ 0.14
CBWD1-225ENST00000616944 EPOPA6NHQ4 379 aa15.89■□□□□ 0.13
CBWD1-225ENST00000616944 TMEM110-MUSTN1A8MSY1 372 aa15.89■□□□□ 0.13
CBWD1-225ENST00000616944 NCK2O43639 380 aa15.89■□□□□ 0.13
CBWD1-225ENST00000616944 RTN3O95197 1032 aaPredicted RBP15.89■□□□□ 0.13
CBWD1-225ENST00000616944 C1RP00736 705 aa15.89■□□□□ 0.13
CBWD1-225ENST00000616944 PDGFRAP16234 1089 aa15.89■□□□□ 0.13
CBWD1-225ENST00000616944 MATKP42679 507 aa15.89■□□□□ 0.13
CBWD1-225ENST00000616944 CLCN4P51793 760 aa15.89■□□□□ 0.13
CBWD1-225ENST00000616944 ACAP1Q15027 740 aa15.89■□□□□ 0.13
CBWD1-225ENST00000616944 PTPROQ16827 1216 aa15.89■□□□□ 0.13
CBWD1-225ENST00000616944 CCDC14Q49A88 953 aa15.89■□□□□ 0.13
CBWD1-225ENST00000616944 DAB2IPQ5VWQ8 1189 aa15.89■□□□□ 0.13
CBWD1-225ENST00000616944 BEND5Q7L4P6 421 aa15.89■□□□□ 0.13
CBWD1-225ENST00000616944 BNIPLQ7Z465 357 aa15.89■□□□□ 0.13
CBWD1-225ENST00000616944 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.89■□□□□ 0.13
CBWD1-225ENST00000616944 FAM149B1Q96BN6 582 aa15.89■□□□□ 0.13
CBWD1-225ENST00000616944 CNPY3Q9BT09 278 aa15.89■□□□□ 0.13
CBWD1-225ENST00000616944 DDX23Q9BUQ8 820 aaKnown RBP15.89■□□□□ 0.13
CBWD1-225ENST00000616944 CERS4Q9HA82 394 aa15.89■□□□□ 0.13
CBWD1-225ENST00000616944 POPDC2Q9HBU9 364 aa15.89■□□□□ 0.13
CBWD1-225ENST00000616944 AMFRQ9UKV5 643 aa15.89■□□□□ 0.13
CBWD1-225ENST00000616944 INSL5Q9Y5Q6 135 aa15.89■□□□□ 0.13
CBWD1-225ENST00000616944 SLC38A8A6NNN8 435 aa15.88■□□□□ 0.13
CBWD1-225ENST00000616944 LRCH4O75427 683 aa15.88■□□□□ 0.13
CBWD1-225ENST00000616944 PSMA2P25787 234 aa15.88■□□□□ 0.13
CBWD1-225ENST00000616944 CA8P35219 290 aa15.88■□□□□ 0.13
CBWD1-225ENST00000616944 CTNNA1P35221 906 aaKnown RBP15.88■□□□□ 0.13
CBWD1-225ENST00000616944 PGFP49763 221 aa15.88■□□□□ 0.13
CBWD1-225ENST00000616944 MTMR3Q13615 1198 aa15.88■□□□□ 0.13
CBWD1-225ENST00000616944 OTUD1Q5VV17 481 aaPredicted RBP15.88■□□□□ 0.13
CBWD1-225ENST00000616944 SCD5Q86SK9 330 aa15.88■□□□□ 0.13
CBWD1-225ENST00000616944 DEFB106AQ8N104 65 aa15.88■□□□□ 0.13
CBWD1-225ENST00000616944 ZNF592Q92610 1267 aa15.88■□□□□ 0.13
CBWD1-225ENST00000616944 CENPIQ92674 756 aaPredicted RBP15.88■□□□□ 0.13
CBWD1-225ENST00000616944 CFAP57Q96MR6 1250 aa15.88■□□□□ 0.13
CBWD1-225ENST00000616944 LMAN2LQ9H0V9 348 aa15.88■□□□□ 0.13
CBWD1-225ENST00000616944 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.88■□□□□ 0.13
CBWD1-225ENST00000616944 NOTCH4Q99466 2003 aa15.88■□□□□ 0.13
CBWD1-225ENST00000616944 DDX3YO15523 660 aaKnown RBP15.87■□□□□ 0.13
CBWD1-225ENST00000616944 SPOPO43791 374 aa15.87■□□□□ 0.13
CBWD1-225ENST00000616944 CSPG5O95196 566 aa15.87■□□□□ 0.13
CBWD1-225ENST00000616944 GLUD1P00367 558 aa15.87■□□□□ 0.13
CBWD1-225ENST00000616944 TCF4P15884 667 aa15.87■□□□□ 0.13
CBWD1-225ENST00000616944 HMGA1P17096 107 aaKnown RBP15.87■□□□□ 0.13
CBWD1-225ENST00000616944 TFE3P19532 575 aaPredicted RBP15.87■□□□□ 0.13
CBWD1-225ENST00000616944 CTNNA2P26232 953 aa15.87■□□□□ 0.13
CBWD1-225ENST00000616944 KLRC2P26717 231 aa15.87■□□□□ 0.13
CBWD1-225ENST00000616944 SDC4P31431 198 aa15.87■□□□□ 0.13
CBWD1-225ENST00000616944 NOS2P35228 1153 aa15.87■□□□□ 0.13
CBWD1-225ENST00000616944 TAS2R40P59535 323 aa15.87■□□□□ 0.13
CBWD1-225ENST00000616944 IFRD2Q12894 506 aaPredicted RBP15.87■□□□□ 0.13
CBWD1-225ENST00000616944 C15orf59Q2T9L4 293 aaPredicted RBP15.87■□□□□ 0.13
CBWD1-225ENST00000616944 LRIT3Q3SXY7 679 aa15.87■□□□□ 0.13
CBWD1-225ENST00000616944 SH3PXD2AQ5TCZ1 1133 aa15.87■□□□□ 0.13
CBWD1-225ENST00000616944 SYPL2Q5VXT5 272 aa15.87■□□□□ 0.13
CBWD1-225ENST00000616944 BSPRYQ5W0U4 402 aa15.87■□□□□ 0.13
CBWD1-225ENST00000616944 MON1AQ86VX9 555 aa15.87■□□□□ 0.13
CBWD1-225ENST00000616944 GIPC2Q8TF65 315 aa15.87■□□□□ 0.13
CBWD1-225ENST00000616944 GDPD5Q8WTR4 605 aa15.87■□□□□ 0.13
CBWD1-225ENST00000616944 ARNTL2Q8WYA1 636 aa15.87■□□□□ 0.13
CBWD1-225ENST00000616944 MYRFLQ96LU7 910 aa15.87■□□□□ 0.13
CBWD1-225ENST00000616944 NPY6RQ99463 290 aa15.87■□□□□ 0.13
CBWD1-225ENST00000616944 SNX12Q9UMY4 172 aa15.87■□□□□ 0.13
CBWD1-225ENST00000616944 MIF4GDA9UHW6 222 aaKnown RBP15.86■□□□□ 0.13
CBWD1-225ENST00000616944 SOX1O00570 391 aaPredicted RBP15.86■□□□□ 0.13
CBWD1-225ENST00000616944 PRRG1O14668 218 aa15.86■□□□□ 0.13
CBWD1-225ENST00000616944 LPXNO60711 386 aa15.86■□□□□ 0.13
CBWD1-225ENST00000616944 ZDHHC11BP0C7U3 371 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms