RNA–Protein interactions for RNA: ENST00000615606.4

CLTCL1-208, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,994 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-208ENST00000615606 RENBPP51606 427 aa9.78□□□□□ -0.84
CLTCL1-208ENST00000615606 DLG4P78352 724 aa9.78□□□□□ -0.84
CLTCL1-208ENST00000615606 PPIGQ13427 754 aaKnown RBP eCLIP9.78□□□□□ -0.843e-7■■■■■ 32
CLTCL1-208ENST00000615606 ECM1Q16610 540 aa9.78□□□□□ -0.84
CLTCL1-208ENST00000615606 DEFB106AQ8N104 65 aa9.78□□□□□ -0.84
CLTCL1-208ENST00000615606 ZNF669Q96BR6 464 aaPredicted RBP9.78□□□□□ -0.84
CLTCL1-208ENST00000615606 ELMO2Q96JJ3 720 aa9.78□□□□□ -0.84
CLTCL1-208ENST00000615606 C9orf72Q96LT7 481 aa9.78□□□□□ -0.84
CLTCL1-208ENST00000615606 TACO1Q9BSH4 297 aaKnown RBP9.78□□□□□ -0.84
CLTCL1-208ENST00000615606 PSMC3IPQ9P2W1 217 aaPredicted RBP9.78□□□□□ -0.84
CLTCL1-208ENST00000615606 SRRDQ9UH36 339 aa9.78□□□□□ -0.84
CLTCL1-208ENST00000615606 TSR3Q9UJK0 312 aaKnown RBP9.78□□□□□ -0.84
CLTCL1-208ENST00000615606 TRIM33Q9UPN9 1127 aa9.78□□□□□ -0.84
CLTCL1-208ENST00000615606 RPTORQ8N122 1335 aa9.78□□□□□ -0.84
CLTCL1-208ENST00000615606 RGPD2P0DJD1 1756 aa9.78□□□□□ -0.84
CLTCL1-208ENST00000615606 CCDC78A2IDD5 438 aa9.78□□□□□ -0.84
CLTCL1-208ENST00000615606 GPR25O00155 361 aa9.78□□□□□ -0.84
CLTCL1-208ENST00000615606 KIF3CO14782 793 aa9.78□□□□□ -0.84
CLTCL1-208ENST00000615606 SYNCRIPO60506 623 aaKnown RBP9.78□□□□□ -0.84
CLTCL1-208ENST00000615606 DDX5P17844 614 aaKnown RBP9.78□□□□□ -0.84
CLTCL1-208ENST00000615606 MAGEA4P43358 317 aa9.78□□□□□ -0.84
CLTCL1-208ENST00000615606 OTUD4Q01804 1114 aaKnown RBP9.78□□□□□ -0.84
CLTCL1-208ENST00000615606 ZACNQ401N2 412 aa9.78□□□□□ -0.84
CLTCL1-208ENST00000615606 ZRANB3Q5FWF4 1079 aa9.78□□□□□ -0.84
CLTCL1-208ENST00000615606 MFN1Q8IWA4 741 aa9.78□□□□□ -0.84
CLTCL1-208ENST00000615606 C3orf20Q8ND61 904 aa9.78□□□□□ -0.84
CLTCL1-208ENST00000615606 ULBP1Q9BZM6 244 aa9.78□□□□□ -0.84
CLTCL1-208ENST00000615606 BRD8Q9H0E9 1235 aa9.78□□□□□ -0.84
CLTCL1-208ENST00000615606 IGFLR1Q9H665 355 aa9.78□□□□□ -0.84
CLTCL1-208ENST00000615606 EML4Q9HC35 981 aaKnown RBP9.78□□□□□ -0.84
CLTCL1-208ENST00000615606 LATS2Q9NRM7 1088 aa9.78□□□□□ -0.84
CLTCL1-208ENST00000615606 TFR2Q9UP52 801 aa9.78□□□□□ -0.84
CLTCL1-208ENST00000615606 OR6C75A6NL08 312 aa9.78□□□□□ -0.84
CLTCL1-208ENST00000615606 DCTN3O75935 186 aa9.78□□□□□ -0.84
CLTCL1-208ENST00000615606 CSH1P0DML2 217 aa9.78□□□□□ -0.84
CLTCL1-208ENST00000615606 CSH2P0DML3 217 aa9.78□□□□□ -0.84
CLTCL1-208ENST00000615606 NPR3P17342 541 aa9.78□□□□□ -0.84
CLTCL1-208ENST00000615606 IGFBP4P22692 258 aa9.78□□□□□ -0.84
CLTCL1-208ENST00000615606 PSEN1P49768 467 aa9.78□□□□□ -0.84
CLTCL1-208ENST00000615606 APLP1P51693 650 aa9.78□□□□□ -0.84
CLTCL1-208ENST00000615606 IFT88Q13099 833 aa9.78□□□□□ -0.84
CLTCL1-208ENST00000615606 TBCCQ15814 346 aa9.78□□□□□ -0.84
CLTCL1-208ENST00000615606 AARS2Q5JTZ9 985 aaKnown RBP9.78□□□□□ -0.84
CLTCL1-208ENST00000615606 DLK2Q6UY11 383 aa9.78□□□□□ -0.84
CLTCL1-208ENST00000615606 SLC51AQ86UW1 340 aa9.78□□□□□ -0.84
CLTCL1-208ENST00000615606 PALB2Q86YC2 1186 aa9.78□□□□□ -0.84
CLTCL1-208ENST00000615606 REXO1L1PQ8IX06 675 aa9.78□□□□□ -0.84
CLTCL1-208ENST00000615606 TOP6BLQ8N6T0 577 aa9.78□□□□□ -0.84
CLTCL1-208ENST00000615606 DHX33Q9H6R0 707 aaKnown RBP9.78□□□□□ -0.84
CLTCL1-208ENST00000615606 OSGEPQ9NPF4 335 aa9.78□□□□□ -0.84
CLTCL1-208ENST00000615606 SMPD4Q9NXE4 827 aa9.78□□□□□ -0.84
CLTCL1-208ENST00000615606 PTCH2Q9Y6C5 1203 aa9.78□□□□□ -0.84
CLTCL1-208ENST00000615606 CNTNAP1P78357 1384 aa9.78□□□□□ -0.84
CLTCL1-208ENST00000615606 KDM3BQ7LBC6 1761 aa9.78□□□□□ -0.84
CLTCL1-208ENST00000615606 TRPM3Q9HCF6 1732 aaPredicted RBP9.78□□□□□ -0.84
CLTCL1-208ENST00000615606 CASQ2O14958 399 aaPredicted RBP9.78□□□□□ -0.84
CLTCL1-208ENST00000615606 RAMP2O60895 175 aa9.78□□□□□ -0.84
CLTCL1-208ENST00000615606 CYP2F1P24903 491 aa9.78□□□□□ -0.84
CLTCL1-208ENST00000615606 VSNL1P62760 191 aa9.78□□□□□ -0.84
CLTCL1-208ENST00000615606 COL9A3Q14050 684 aaPredicted RBP9.78□□□□□ -0.84
CLTCL1-208ENST00000615606 ARSHQ5FYA8 562 aa9.78□□□□□ -0.84
CLTCL1-208ENST00000615606 DENND5BQ6ZUT9 1274 aa9.78□□□□□ -0.84
CLTCL1-208ENST00000615606 SCUBE3Q8IX30 993 aa9.78□□□□□ -0.84
CLTCL1-208ENST00000615606 ATP6V1G3Q96LB4 118 aa9.78□□□□□ -0.84
CLTCL1-208ENST00000615606 SLC13A4Q9UKG4 626 aa9.78□□□□□ -0.84
CLTCL1-208ENST00000615606 SMG5Q9UPR3 1016 aaKnown RBP9.78□□□□□ -0.84
CLTCL1-208ENST00000615606 A0A0B4J269 797 aa9.77□□□□□ -0.84
CLTCL1-208ENST00000615606 SLC9A3R1O14745 358 aaPredicted RBP9.77□□□□□ -0.84
CLTCL1-208ENST00000615606 AGTP01019 485 aa9.77□□□□□ -0.84
CLTCL1-208ENST00000615606 ARL2P36404 184 aa9.77□□□□□ -0.84
CLTCL1-208ENST00000615606 CTCFP49711 727 aaPredicted RBP9.77□□□□□ -0.84
CLTCL1-208ENST00000615606 PTK7Q13308 1070 aa9.77□□□□□ -0.84
CLTCL1-208ENST00000615606 STARD3Q14849 445 aa9.77□□□□□ -0.84
CLTCL1-208ENST00000615606 RBBP7Q16576 425 aa9.77□□□□□ -0.84
CLTCL1-208ENST00000615606 TSHZ1Q6ZSZ6 1077 aa9.77□□□□□ -0.84
CLTCL1-208ENST00000615606 B3GALNT2Q8NCR0 500 aa9.77□□□□□ -0.84
CLTCL1-208ENST00000615606 MFSD14AQ96MC6 490 aa9.77□□□□□ -0.84
CLTCL1-208ENST00000615606 SERPINI1Q99574 410 aa9.77□□□□□ -0.84
CLTCL1-208ENST00000615606 ISCUQ9H1K1 167 aa9.77□□□□□ -0.84
CLTCL1-208ENST00000615606 KCTD10Q9H3F6 313 aa9.77□□□□□ -0.84
CLTCL1-208ENST00000615606 TRABDQ9H4I3 376 aa9.77□□□□□ -0.84
CLTCL1-208ENST00000615606 SMARCAL1Q9NZC9 954 aa9.77□□□□□ -0.84
CLTCL1-208ENST00000615606 C4BP0C0L5 1744 aa9.77□□□□□ -0.84
CLTCL1-208ENST00000615606 COL1A1P02452 1464 aaPredicted RBP9.77□□□□□ -0.84
CLTCL1-208ENST00000615606 VGLL3A8MV65 326 aa9.77□□□□□ -0.85
CLTCL1-208ENST00000615606 E5RJQ4 531 aa9.77□□□□□ -0.85
CLTCL1-208ENST00000615606 CBX4O00257 560 aa9.77□□□□□ -0.85
CLTCL1-208ENST00000615606 WNT7AO00755 349 aa9.77□□□□□ -0.85
CLTCL1-208ENST00000615606 LZTS3O60299 673 aaPredicted RBP9.77□□□□□ -0.85
CLTCL1-208ENST00000615606 ATP5C1P36542 298 aaKnown RBP9.77□□□□□ -0.85
CLTCL1-208ENST00000615606 MAPK7Q13164 816 aa9.77□□□□□ -0.85
CLTCL1-208ENST00000615606 PSMD5Q16401 504 aa9.77□□□□□ -0.85
CLTCL1-208ENST00000615606 MEI1Q5TIA1 1274 aa9.77□□□□□ -0.85
CLTCL1-208ENST00000615606 LRIG3Q6UXM1 1119 aa9.77□□□□□ -0.85
CLTCL1-208ENST00000615606 RASAL3Q86YV0 1011 aa9.77□□□□□ -0.85
CLTCL1-208ENST00000615606 NAT9Q9BTE0 207 aa9.77□□□□□ -0.85
CLTCL1-208ENST00000615606 EFHD1Q9BUP0 239 aa9.77□□□□□ -0.85
CLTCL1-208ENST00000615606 STK39Q9UEW8 545 aa9.77□□□□□ -0.85
CLTCL1-208ENST00000615606 PADI3Q9ULW8 664 aa9.77□□□□□ -0.85
CLTCL1-208ENST00000615606 Q9Y3F1 56 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms