RNA–Protein interactions for RNA: ENST00000612828.4

CNTNAP3B-211, Transcript of contactin associated protein like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 7,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-211ENST00000612828 MYBL2P10244 700 aa11.17□□□□□ -0.62
CNTNAP3B-211ENST00000612828 C6P13671 934 aa11.17□□□□□ -0.62
CNTNAP3B-211ENST00000612828 IFNAR1P17181 557 aa11.17□□□□□ -0.62
CNTNAP3B-211ENST00000612828 MSH3P20585 1137 aa11.17□□□□□ -0.62
CNTNAP3B-211ENST00000612828 CCNOP22674 350 aa11.17□□□□□ -0.62
CNTNAP3B-211ENST00000612828 MAN2A2P49641 1150 aa11.17□□□□□ -0.62
CNTNAP3B-211ENST00000612828 SLC2A7Q6PXP3 512 aa11.17□□□□□ -0.62
CNTNAP3B-211ENST00000612828 EHD2Q9NZN4 543 aa11.17□□□□□ -0.62
CNTNAP3B-211ENST00000612828 ARPP21Q9UBL0 812 aaPredicted RBP11.17□□□□□ -0.62
CNTNAP3B-211ENST00000612828 RWDD3Q9Y3V2 267 aa11.17□□□□□ -0.62
CNTNAP3B-211ENST00000612828 FOXN3O00409 490 aaPredicted RBP11.17□□□□□ -0.62
CNTNAP3B-211ENST00000612828 MAGEB2O15479 319 aa11.17□□□□□ -0.62
CNTNAP3B-211ENST00000612828 TUBG1P23258 451 aa11.17□□□□□ -0.62
CNTNAP3B-211ENST00000612828 CSTF3Q12996 717 aaKnown RBP11.17□□□□□ -0.62
CNTNAP3B-211ENST00000612828 CATSPER4Q7RTX7 472 aa11.17□□□□□ -0.62
CNTNAP3B-211ENST00000612828 PAGE5Q96GU1 130 aa11.17□□□□□ -0.62
CNTNAP3B-211ENST00000612828 GPR108Q9NPR9 543 aa11.17□□□□□ -0.62
CNTNAP3B-211ENST00000612828 MED23Q9ULK4 1368 aa11.17□□□□□ -0.62
CNTNAP3B-211ENST00000612828 BAIAP3O94812 1187 aa11.17□□□□□ -0.62
CNTNAP3B-211ENST00000612828 FGFR2P21802 821 aa11.17□□□□□ -0.62
CNTNAP3B-211ENST00000612828 STARD3Q14849 445 aa11.17□□□□□ -0.62
CNTNAP3B-211ENST00000612828 PAN2Q504Q3 1202 aaKnown RBP11.17□□□□□ -0.62
CNTNAP3B-211ENST00000612828 CYB5R4Q7L1T6 521 aa11.17□□□□□ -0.62
CNTNAP3B-211ENST00000612828 NPLOC4Q8TAT6 608 aa11.17□□□□□ -0.62
CNTNAP3B-211ENST00000612828 TPD52L3Q96J77 140 aa11.17□□□□□ -0.62
CNTNAP3B-211ENST00000612828 RWDD2AQ9UIY3 292 aa11.17□□□□□ -0.62
CNTNAP3B-211ENST00000612828 A0A075B6Q4 140 aa11.16□□□□□ -0.62
CNTNAP3B-211ENST00000612828 VWA5AO00534 786 aa11.16□□□□□ -0.62
CNTNAP3B-211ENST00000612828 SSNA1O43805 119 aa11.16□□□□□ -0.62
CNTNAP3B-211ENST00000612828 TNFRSF21O75509 655 aa11.16□□□□□ -0.62
CNTNAP3B-211ENST00000612828 POLR2MP0CAP2 368 aa11.16□□□□□ -0.62
CNTNAP3B-211ENST00000612828 GRK3P35626 688 aa11.16□□□□□ -0.62
CNTNAP3B-211ENST00000612828 ECH1Q13011 328 aa11.16□□□□□ -0.62
CNTNAP3B-211ENST00000612828 IQSEC1Q6DN90 963 aa11.16□□□□□ -0.62
CNTNAP3B-211ENST00000612828 CYFIP1Q7L576 1253 aa11.16□□□□□ -0.62
CNTNAP3B-211ENST00000612828 HIC2Q96JB3 615 aa11.16□□□□□ -0.62
CNTNAP3B-211ENST00000612828 USP40Q9NVE5 1235 aa11.16□□□□□ -0.62
CNTNAP3B-211ENST00000612828 ADAM30Q9UKF2 790 aa11.16□□□□□ -0.62
CNTNAP3B-211ENST00000612828 COPEO14579 308 aa11.16□□□□□ -0.62
CNTNAP3B-211ENST00000612828 ADORA2BP29275 332 aa11.16□□□□□ -0.62
CNTNAP3B-211ENST00000612828 MAGEA10P43363 369 aaPredicted RBP11.16□□□□□ -0.62
CNTNAP3B-211ENST00000612828 CCZ1BP86790 482 aa11.16□□□□□ -0.62
CNTNAP3B-211ENST00000612828 CCZ1P86791 482 aaPredicted RBP11.16□□□□□ -0.62
CNTNAP3B-211ENST00000612828 ALG11Q2TAA5 492 aa11.16□□□□□ -0.62
CNTNAP3B-211ENST00000612828 CDK20Q8IZL9 346 aa11.16□□□□□ -0.62
CNTNAP3B-211ENST00000612828 TRMT6Q9UJA5 497 aaKnown RBP11.16□□□□□ -0.62
CNTNAP3B-211ENST00000612828 ANKRD34BA5PLL1 514 aa11.16□□□□□ -0.62
CNTNAP3B-211ENST00000612828 OR5H15A6NDH6 313 aa11.16□□□□□ -0.62
CNTNAP3B-211ENST00000612828 OR5H14A6NHG9 310 aa11.16□□□□□ -0.62
CNTNAP3B-211ENST00000612828 OR5H1A6NKK0 313 aa11.16□□□□□ -0.62
CNTNAP3B-211ENST00000612828 H3BUI4 141 aa11.16□□□□□ -0.62
CNTNAP3B-211ENST00000612828 CYP27B1O15528 508 aa11.16□□□□□ -0.62
CNTNAP3B-211ENST00000612828 LRATO95237 230 aa11.16□□□□□ -0.62
CNTNAP3B-211ENST00000612828 RALAP11233 206 aa11.16□□□□□ -0.62
CNTNAP3B-211ENST00000612828 CDH2P19022 906 aaPredicted RBP11.16□□□□□ -0.62
CNTNAP3B-211ENST00000612828 WARSP23381 471 aaKnown RBP11.16□□□□□ -0.62
CNTNAP3B-211ENST00000612828 PSMD4P55036 377 aaKnown RBP11.16□□□□□ -0.62
CNTNAP3B-211ENST00000612828 LSM3P62310 102 aaKnown RBP11.16□□□□□ -0.62
CNTNAP3B-211ENST00000612828 GIT2Q14161 759 aa11.16□□□□□ -0.62
CNTNAP3B-211ENST00000612828 DAPK2Q9UIK4 370 aa11.16□□□□□ -0.62
CNTNAP3B-211ENST00000612828 OR52Z1P0C646 297 aa11.16□□□□□ -0.62
CNTNAP3B-211ENST00000612828 PPP1R2P41236 205 aa11.16□□□□□ -0.62
CNTNAP3B-211ENST00000612828 IL12RB1P42701 662 aa11.16□□□□□ -0.62
CNTNAP3B-211ENST00000612828 THOP1P52888 689 aa11.16□□□□□ -0.62
CNTNAP3B-211ENST00000612828 ZNF846Q147U1 533 aa11.16□□□□□ -0.62
CNTNAP3B-211ENST00000612828 DGKDQ16760 1214 aa11.16□□□□□ -0.62
CNTNAP3B-211ENST00000612828 C2orf73Q8N5S3 287 aaPredicted RBP11.16□□□□□ -0.62
CNTNAP3B-211ENST00000612828 LRFN1Q9P244 771 aa11.16□□□□□ -0.62
CNTNAP3B-211ENST00000612828 SSX5O60225 188 aa11.16□□□□□ -0.62
CNTNAP3B-211ENST00000612828 RNASEH1O60930 286 aaKnown RBP11.16□□□□□ -0.62
CNTNAP3B-211ENST00000612828 MCAMP43121 646 aa11.16□□□□□ -0.62
CNTNAP3B-211ENST00000612828 ACTR2P61160 394 aa11.16□□□□□ -0.62
CNTNAP3B-211ENST00000612828 GALNTL6Q49A17 601 aa11.16□□□□□ -0.62
CNTNAP3B-211ENST00000612828 ATP13A4Q4VNC1 1196 aa11.16□□□□□ -0.62
CNTNAP3B-211ENST00000612828 GAB3Q8WWW8 586 aa11.16□□□□□ -0.62
CNTNAP3B-211ENST00000612828 TCEAL3Q969E4 200 aa11.16□□□□□ -0.62
CNTNAP3B-211ENST00000612828 AGPAT1Q99943 283 aa11.16□□□□□ -0.62
CNTNAP3B-211ENST00000612828 CPVLQ9H3G5 476 aa11.16□□□□□ -0.62
CNTNAP3B-211ENST00000612828 METTL8Q9H825 291 aaKnown RBP11.16□□□□□ -0.62
CNTNAP3B-211ENST00000612828 CYP4F12Q9HCS2 524 aa11.16□□□□□ -0.62
CNTNAP3B-211ENST00000612828 STX7O15400 261 aaKnown RBP11.16□□□□□ -0.62
CNTNAP3B-211ENST00000612828 KRT36O76013 467 aa11.16□□□□□ -0.62
CNTNAP3B-211ENST00000612828 CYP17A1P05093 508 aa11.16□□□□□ -0.62
CNTNAP3B-211ENST00000612828 H2AFXP16104 143 aaPredicted RBP11.16□□□□□ -0.62
CNTNAP3B-211ENST00000612828 GFOD2Q3B7J2 385 aa11.16□□□□□ -0.62
CNTNAP3B-211ENST00000612828 TTC39CQ8N584 583 aa11.16□□□□□ -0.62
CNTNAP3B-211ENST00000612828 SLC25A41Q8N5S1 370 aa11.16□□□□□ -0.62
CNTNAP3B-211ENST00000612828 ZNF512Q96ME7 567 aaPredicted RBP11.16□□□□□ -0.62
CNTNAP3B-211ENST00000612828 FOXP1Q9H334 677 aaPredicted RBP11.16□□□□□ -0.62
CNTNAP3B-211ENST00000612828 A0A096LPK6 155 aa11.15□□□□□ -0.62
CNTNAP3B-211ENST00000612828 ZSCAN5CA6NGD5 496 aaPredicted RBP11.15□□□□□ -0.62
CNTNAP3B-211ENST00000612828 KBTBD13C9JR72 458 aa11.15□□□□□ -0.62
CNTNAP3B-211ENST00000612828 PRKAR1BP31321 381 aa11.15□□□□□ -0.62
CNTNAP3B-211ENST00000612828 PRKAA1Q13131 559 aa11.15□□□□□ -0.62
CNTNAP3B-211ENST00000612828 BBS1Q8NFJ9 593 aa11.15□□□□□ -0.62
CNTNAP3B-211ENST00000612828 MKNK1Q9BUB5 465 aa11.15□□□□□ -0.62
CNTNAP3B-211ENST00000612828 ZSCAN5AQ9BUG6 496 aa11.15□□□□□ -0.62
CNTNAP3B-211ENST00000612828 POLD4Q9HCU8 107 aa11.15□□□□□ -0.62
CNTNAP3B-211ENST00000612828 RDH8Q9NYR8 311 aa11.15□□□□□ -0.62
CNTNAP3B-211ENST00000612828 NOP53Q9NZM5 478 aaKnown RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms