RNA–Protein interactions for RNA: ENST00000612672.1

MMP28-203, Transcript of matrix metallopeptidase 28, humanhuman

TSL 1 (best) BASIC

Gene MMP28, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP28-203ENST00000612672 TERB1Q8NA31 727 aa24.9■■□□□ 1.58
MMP28-203ENST00000612672 ZNF516Q92618 1163 aa24.9■■□□□ 1.58
MMP28-203ENST00000612672 FBXO32Q969P5 355 aa24.9■■□□□ 1.58
MMP28-203ENST00000612672 ELMO3Q96BJ8 720 aa24.9■■□□□ 1.58
MMP28-203ENST00000612672 ELOVL4Q9GZR5 314 aa24.9■■□□□ 1.58
MMP28-203ENST00000612672 SLC6A17Q9H1V8 727 aa24.9■■□□□ 1.58
MMP28-203ENST00000612672 EHD2Q9NZN4 543 aa24.9■■□□□ 1.58
MMP28-203ENST00000612672 CHORDC1Q9UHD1 332 aaPredicted RBP24.9■■□□□ 1.58
MMP28-203ENST00000612672 BPTFQ12830 3046 aa24.89■■□□□ 1.58
MMP28-203ENST00000612672 TBC1D3BA6NDS4 549 aa24.89■■□□□ 1.58
MMP28-203ENST00000612672 PALM2-AKAP2B1ALY0 433 aaPredicted RBP24.89■■□□□ 1.58
MMP28-203ENST00000612672 SERPINF2P08697 491 aa24.89■■□□□ 1.58
MMP28-203ENST00000612672 DLATP10515 647 aaKnown RBP24.89■■□□□ 1.58
MMP28-203ENST00000612672 YWHAQP27348 245 aa24.89■■□□□ 1.58
MMP28-203ENST00000612672 STAT6P42226 847 aa24.89■■□□□ 1.58
MMP28-203ENST00000612672 GAD2Q05329 585 aa24.89■■□□□ 1.58
MMP28-203ENST00000612672 ZNF33AQ06730 810 aa24.89■■□□□ 1.58
MMP28-203ENST00000612672 C10orf76Q5T2E6 689 aa24.89■■□□□ 1.58
MMP28-203ENST00000612672 DDX42Q86XP3 938 aaKnown RBP eCLIP24.89■■□□□ 1.58
MMP28-203ENST00000612672 NUP93Q8N1F7 819 aa24.89■■□□□ 1.58
MMP28-203ENST00000612672 RDH13Q8NBN7 331 aa24.89■■□□□ 1.58
MMP28-203ENST00000612672 B3GALNT2Q8NCR0 500 aa24.89■■□□□ 1.58
MMP28-203ENST00000612672 XYLT2Q9H1B5 865 aa24.89■■□□□ 1.58
MMP28-203ENST00000612672 TBC1D14Q9P2M4 693 aa24.89■■□□□ 1.58
MMP28-203ENST00000612672 R3HCC1Q9Y3T6 440 aaKnown RBP24.89■■□□□ 1.58
MMP28-203ENST00000612672 FAM221BA6H8Z2 402 aa24.88■■□□□ 1.57
MMP28-203ENST00000612672 TGFB1I1O43294 461 aa24.88■■□□□ 1.57
MMP28-203ENST00000612672 AP5Z1O43299 807 aa24.88■■□□□ 1.57
MMP28-203ENST00000612672 GREM1O60565 184 aa24.88■■□□□ 1.57
MMP28-203ENST00000612672 IRF1P10914 325 aa24.88■■□□□ 1.57
MMP28-203ENST00000612672 HOXB2P14652 356 aa24.88■■□□□ 1.57
MMP28-203ENST00000612672 NDUFV2P19404 249 aa24.88■■□□□ 1.57
MMP28-203ENST00000612672 HOXD12P35452 270 aa24.88■■□□□ 1.57
MMP28-203ENST00000612672 RAB44Q7Z6P3 723 aaPredicted RBP24.88■■□□□ 1.57
MMP28-203ENST00000612672 P2RY11Q96G91 374 aa24.88■■□□□ 1.57
MMP28-203ENST00000612672 CGRRF1Q99675 332 aa24.88■■□□□ 1.57
MMP28-203ENST00000612672 SMYD3Q9H7B4 428 aa24.88■■□□□ 1.57
MMP28-203ENST00000612672 SPHK2Q9NRA0 654 aa24.88■■□□□ 1.57
MMP28-203ENST00000612672 GMIPQ9P107 970 aa24.88■■□□□ 1.57
MMP28-203ENST00000612672 PTPRBP23467 1997 aa24.87■■□□□ 1.57
MMP28-203ENST00000612672 KIAA0391O15091 583 aaKnown RBP24.87■■□□□ 1.57
MMP28-203ENST00000612672 GJB3O75712 270 aa24.87■■□□□ 1.57
MMP28-203ENST00000612672 SLC5A3P53794 718 aa24.87■■□□□ 1.57
MMP28-203ENST00000612672 MYL6P60660 151 aa24.87■■□□□ 1.57
MMP28-203ENST00000612672 GFPT1Q06210 699 aaPredicted RBP24.87■■□□□ 1.57
MMP28-203ENST00000612672 BYSLQ13895 437 aaKnown RBP24.87■■□□□ 1.57
MMP28-203ENST00000612672 ACAP1Q15027 740 aa24.87■■□□□ 1.57
MMP28-203ENST00000612672 SURF1Q15526 300 aa24.87■■□□□ 1.57
MMP28-203ENST00000612672 SNRNP35Q16560 246 aaKnown RBP24.87■■□□□ 1.57
MMP28-203ENST00000612672 WDR72Q3MJ13 1102 aa24.87■■□□□ 1.57
MMP28-203ENST00000612672 CCDC73Q6ZRK6 1079 aa24.87■■□□□ 1.57
MMP28-203ENST00000612672 EPM2AIP1Q7L775 607 aaPredicted RBP24.87■■□□□ 1.57
MMP28-203ENST00000612672 FAM35AQ86V20 835 aa24.87■■□□□ 1.57
MMP28-203ENST00000612672 PDILTQ8N807 584 aa24.87■■□□□ 1.57
MMP28-203ENST00000612672 IL37Q9NZH6 218 aa24.87■■□□□ 1.57
MMP28-203ENST00000612672 CYP8B1Q9UNU6 501 aa24.87■■□□□ 1.57
MMP28-203ENST00000612672 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.87■■□□□ 1.57
MMP28-203ENST00000612672 A8MXQ7 604 aa24.86■■□□□ 1.57
MMP28-203ENST00000612672 OPHN1O60890 802 aa24.86■■□□□ 1.57
MMP28-203ENST00000612672 ZDHHC11BP0C7U3 371 aa24.86■■□□□ 1.57
MMP28-203ENST00000612672 TXLNAP40222 546 aa24.86■■□□□ 1.57
MMP28-203ENST00000612672 ATXN3P54252 364 aaPredicted RBP24.86■■□□□ 1.57
MMP28-203ENST00000612672 CDH8P55286 799 aa24.86■■□□□ 1.57
MMP28-203ENST00000612672 CYP24A1Q07973 514 aa24.86■■□□□ 1.57
MMP28-203ENST00000612672 ANO4Q32M45 955 aa24.86■■□□□ 1.57
MMP28-203ENST00000612672 HECTD3Q5T447 861 aa24.86■■□□□ 1.57
MMP28-203ENST00000612672 SNX30Q5VWJ9 437 aa24.86■■□□□ 1.57
MMP28-203ENST00000612672 TOGARAM2Q6ZUX3 1019 aa24.86■■□□□ 1.57
MMP28-203ENST00000612672 HDDC3Q8N4P3 179 aa24.86■■□□□ 1.57
MMP28-203ENST00000612672 CEP76Q8TAP6 659 aa24.86■■□□□ 1.57
MMP28-203ENST00000612672 PLEKHO2Q8TD55 490 aa24.86■■□□□ 1.57
MMP28-203ENST00000612672 CCDC127Q96BQ5 260 aa24.86■■□□□ 1.57
MMP28-203ENST00000612672 OTUB2Q96DC9 234 aa24.86■■□□□ 1.57
MMP28-203ENST00000612672 HSPA12BQ96MM6 686 aa24.86■■□□□ 1.57
MMP28-203ENST00000612672 AGPAT3Q9NRZ7 376 aa24.86■■□□□ 1.57
MMP28-203ENST00000612672 DEC1Q9P2X7 70 aa24.86■■□□□ 1.57
MMP28-203ENST00000612672 RAD54BQ9Y620 910 aa24.86■■□□□ 1.57
MMP28-203ENST00000612672 APC2O95996 2303 aa24.86■■□□□ 1.57
MMP28-203ENST00000612672 PRRT4C9JH25 899 aa24.85■■□□□ 1.57
MMP28-203ENST00000612672 ARHGAP33O14559 1287 aa24.85■■□□□ 1.57
MMP28-203ENST00000612672 CLIC2O15247 247 aa24.85■■□□□ 1.57
MMP28-203ENST00000612672 TNNI1P19237 187 aa24.85■■□□□ 1.57
MMP28-203ENST00000612672 NTSR1P30989 418 aa24.85■■□□□ 1.57
MMP28-203ENST00000612672 DPP6P42658 865 aa24.85■■□□□ 1.57
MMP28-203ENST00000612672 TNNC1P63316 161 aa24.85■■□□□ 1.57
MMP28-203ENST00000612672 PSMD6Q15008 389 aa24.85■■□□□ 1.57
MMP28-203ENST00000612672 PROSER1Q86XN7 944 aa24.85■■□□□ 1.57
MMP28-203ENST00000612672 CCDC65Q8IXS2 484 aa24.85■■□□□ 1.57
MMP28-203ENST00000612672 TRIML1Q8N9V2 468 aa24.85■■□□□ 1.57
MMP28-203ENST00000612672 PDZD8Q8NEN9 1154 aa24.85■■□□□ 1.57
MMP28-203ENST00000612672 ZMIZ2Q8NF64 920 aa24.85■■□□□ 1.57
MMP28-203ENST00000612672 OVCA2Q8WZ82 227 aa24.85■■□□□ 1.57
MMP28-203ENST00000612672 USP28Q96RU2 1077 aa24.85■■□□□ 1.57
MMP28-203ENST00000612672 SDCBP2Q9H190 292 aa24.85■■□□□ 1.57
MMP28-203ENST00000612672 NXF1Q9UBU9 619 aaKnown RBP24.85■■□□□ 1.57
MMP28-203ENST00000612672 SH3BP1Q9Y3L3 701 aa24.85■■□□□ 1.57
MMP28-203ENST00000612672 STARD13Q9Y3M8 1113 aa24.85■■□□□ 1.57
MMP28-203ENST00000612672 SH3BP5O60239 455 aa24.84■■□□□ 1.57
MMP28-203ENST00000612672 RTN3O95197 1032 aaPredicted RBP24.84■■□□□ 1.57
MMP28-203ENST00000612672 CASP4P49662 377 aa24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms