RNA–Protein interactions for RNA: ENST00000607805.5

NECAB3-222, Transcript of N-terminal EF-hand calcium binding protein 3, human

TSL 5

Gene NECAB3, Length 969 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAB3-222	ENST00000607805	SYT12	Q8IV01	421 aa		22.31	■■□□□ 1.16
NECAB3-222	ENST00000607805	NELFCD	Q8IXH7	590 aa		22.31	■■□□□ 1.16
NECAB3-222	ENST00000607805	IQUB	Q8NA54	791 aa		22.31	■■□□□ 1.16
NECAB3-222	ENST00000607805	KCNV2	Q8TDN2	545 aa		22.31	■■□□□ 1.16
NECAB3-222	ENST00000607805	WBP2	Q969T9	261 aa		22.31	■■□□□ 1.16
NECAB3-222	ENST00000607805	DHX58	Q96C10	678 aa		22.31	■■□□□ 1.16
NECAB3-222	ENST00000607805	SMYD3	Q9H7B4	428 aa		22.31	■■□□□ 1.16
NECAB3-222	ENST00000607805	CCSER2	Q9H7U1	834 aa		22.31	■■□□□ 1.16
NECAB3-222	ENST00000607805	CGN	Q9P2M7	1197 aa	Known RBP	22.31	■■□□□ 1.16
NECAB3-222	ENST00000607805	NXF1	Q9UBU9	619 aa	Known RBP	22.31	■■□□□ 1.16
NECAB3-222	ENST00000607805	CHORDC1	Q9UHD1	332 aa	Predicted RBP	22.31	■■□□□ 1.16
NECAB3-222	ENST00000607805	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		22.3	■■□□□ 1.16
NECAB3-222	ENST00000607805	CDH8	P55286	799 aa		22.3	■■□□□ 1.16
NECAB3-222	ENST00000607805	TRPC3	Q13507	836 aa		22.3	■■□□□ 1.16
NECAB3-222	ENST00000607805	TRIM61	Q5EBN2	209 aa		22.3	■■□□□ 1.16
NECAB3-222	ENST00000607805	HECTD3	Q5T447	861 aa		22.3	■■□□□ 1.16
NECAB3-222	ENST00000607805	TTC30A	Q86WT1	665 aa		22.3	■■□□□ 1.16
NECAB3-222	ENST00000607805	TMEFF1	Q8IYR6	380 aa		22.3	■■□□□ 1.16
NECAB3-222	ENST00000607805	KDF1	Q8NAX2	398 aa	Predicted RBP	22.3	■■□□□ 1.16
NECAB3-222	ENST00000607805	SYAP1	Q96A49	352 aa	Predicted RBP	22.3	■■□□□ 1.16
NECAB3-222	ENST00000607805	COMMD8	Q9NX08	183 aa		22.3	■■□□□ 1.16
NECAB3-222	ENST00000607805	GREM1	O60565	184 aa		22.29	■■□□□ 1.16
NECAB3-222	ENST00000607805	TULP3	O75386	442 aa		22.29	■■□□□ 1.16
NECAB3-222	ENST00000607805	TOP3B	O95985	862 aa	Known RBP	22.29	■■□□□ 1.16
NECAB3-222	ENST00000607805	CASP1	P29466	404 aa		22.29	■■□□□ 1.16
NECAB3-222	ENST00000607805	CASP4	P49662	377 aa		22.29	■■□□□ 1.16
NECAB3-222	ENST00000607805	PGF	P49763	221 aa		22.29	■■□□□ 1.16
NECAB3-222	ENST00000607805	SLC5A3	P53794	718 aa		22.29	■■□□□ 1.16
NECAB3-222	ENST00000607805	LMAN2	Q12907	356 aa		22.29	■■□□□ 1.16
NECAB3-222	ENST00000607805	SLC23A3	Q6PIS1	610 aa		22.29	■■□□□ 1.16
NECAB3-222	ENST00000607805	BBS7	Q8IWZ6	715 aa		22.29	■■□□□ 1.16
NECAB3-222	ENST00000607805	FUK	Q8N0W3	1084 aa		22.29	■■□□□ 1.16
NECAB3-222	ENST00000607805	ZMIZ2	Q8NF64	920 aa		22.29	■■□□□ 1.16
NECAB3-222	ENST00000607805	PARD3B	Q8TEW8	1205 aa		22.29	■■□□□ 1.16
NECAB3-222	ENST00000607805	HMGB4	Q8WW32	186 aa		22.29	■■□□□ 1.16
NECAB3-222	ENST00000607805	SPACA7	Q96KW9	195 aa		22.29	■■□□□ 1.16
NECAB3-222	ENST00000607805	SDCBP2	Q9H190	292 aa		22.29	■■□□□ 1.16
NECAB3-222	ENST00000607805	CD248	Q9HCU0	757 aa		22.29	■■□□□ 1.16
NECAB3-222	ENST00000607805	SPHK2	Q9NRA0	654 aa		22.29	■■□□□ 1.16
NECAB3-222	ENST00000607805	TFIP11	Q9UBB9	837 aa	Known RBP	22.29	■■□□□ 1.16
NECAB3-222	ENST00000607805	PILRB	Q9UKJ0	227 aa		22.29	■■□□□ 1.16
NECAB3-222	ENST00000607805	STARD13	Q9Y3M8	1113 aa		22.29	■■□□□ 1.16
NECAB3-222	ENST00000607805	CKAP5	Q14008	2032 aa		22.29	■■□□□ 1.16
NECAB3-222	ENST00000607805	TCRBV21S2A2	A0A5A6	115 aa		22.28	■■□□□ 1.16
NECAB3-222	ENST00000607805	CUTA	O60888	179 aa		22.28	■■□□□ 1.16
NECAB3-222	ENST00000607805	VNN1	O95497	513 aa		22.28	■■□□□ 1.16
NECAB3-222	ENST00000607805	YEATS4	O95619	227 aa		22.28	■■□□□ 1.16
NECAB3-222	ENST00000607805	C4BPA	P04003	597 aa	Known RBP	22.28	■■□□□ 1.16
NECAB3-222	ENST00000607805	FOXC1	Q12948	553 aa		22.28	■■□□□ 1.16
NECAB3-222	ENST00000607805	TMEM25	Q86YD3	366 aa		22.28	■■□□□ 1.16
NECAB3-222	ENST00000607805	TMEM174	Q8WUU8	243 aa		22.28	■■□□□ 1.16
NECAB3-222	ENST00000607805	MAGEF1	Q9HAY2	307 aa		22.28	■■□□□ 1.16
NECAB3-222	ENST00000607805	DMAP1	Q9NPF5	467 aa	Predicted RBP	22.28	■■□□□ 1.16
NECAB3-222	ENST00000607805	ACACA	Q13085	2346 aa		22.28	■■□□□ 1.16
NECAB3-222	ENST00000607805	TRIM24	O15164	1050 aa		22.27	■■□□□ 1.16
NECAB3-222	ENST00000607805	SPINK2	P20155	84 aa		22.27	■■□□□ 1.16
NECAB3-222	ENST00000607805	HOXD12	P35452	270 aa		22.27	■■□□□ 1.16
NECAB3-222	ENST00000607805	BYSL	Q13895	437 aa	Known RBP	22.27	■■□□□ 1.16
NECAB3-222	ENST00000607805	KNOP1	Q1ED39	458 aa	Known RBP	22.27	■■□□□ 1.16
NECAB3-222	ENST00000607805	PIP4P1	Q86T03	277 aa		22.27	■■□□□ 1.16
NECAB3-222	ENST00000607805	MIB1	Q86YT6	1006 aa		22.27	■■□□□ 1.16
NECAB3-222	ENST00000607805	ZNF513	Q8N8E2	541 aa	Predicted RBP	22.27	■■□□□ 1.16
NECAB3-222	ENST00000607805	NAT16	Q8N8M0	369 aa		22.27	■■□□□ 1.16
NECAB3-222	ENST00000607805	TERB1	Q8NA31	727 aa		22.27	■■□□□ 1.16
NECAB3-222	ENST00000607805	DEFB124	Q8NES8	71 aa		22.27	■■□□□ 1.16
NECAB3-222	ENST00000607805	GATA6	Q92908	595 aa		22.27	■■□□□ 1.16
NECAB3-222	ENST00000607805	SMARCD1	Q96GM5	515 aa		22.27	■■□□□ 1.16
NECAB3-222	ENST00000607805	SMO	Q99835	787 aa		22.27	■■□□□ 1.16
NECAB3-222	ENST00000607805	NUSAP1	Q9BXS6	441 aa	Known RBP	22.27	■■□□□ 1.16
NECAB3-222	ENST00000607805	ADAM33	Q9BZ11	813 aa		22.27	■■□□□ 1.16
NECAB3-222	ENST00000607805	CSNK1G1	Q9HCP0	422 aa		22.27	■■□□□ 1.16
NECAB3-222	ENST00000607805	SLC39A2	Q9NP94	309 aa		22.27	■■□□□ 1.16
NECAB3-222	ENST00000607805	DMAC2	Q9NW81	257 aa		22.27	■■□□□ 1.16
NECAB3-222	ENST00000607805	GMIP	Q9P107	970 aa		22.27	■■□□□ 1.16
NECAB3-222	ENST00000607805	BCCIP	Q9P287	314 aa	Known RBP eCLIP	22.27	■■□□□ 1.16
NECAB3-222	ENST00000607805	DEC1	Q9P2X7	70 aa		22.27	■■□□□ 1.16
NECAB3-222	ENST00000607805	ATP8B3	O60423	1300 aa		22.27	■■□□□ 1.16
NECAB3-222	ENST00000607805	PVALEF	A0A1B0GWK0	134 aa		22.26	■■□□□ 1.15
NECAB3-222	ENST00000607805		A0A1W2PQF6	199 aa		22.26	■■□□□ 1.15
NECAB3-222	ENST00000607805	TBC1D3B	A6NDS4	549 aa		22.26	■■□□□ 1.15
NECAB3-222	ENST00000607805	LRRIQ3	A6PVS8	624 aa	Predicted RBP	22.26	■■□□□ 1.15
NECAB3-222	ENST00000607805	UPK3BL1	B0FP48	263 aa		22.26	■■□□□ 1.15
NECAB3-222	ENST00000607805	UPK3BL2	E5RIL1	263 aa		22.26	■■□□□ 1.15
NECAB3-222	ENST00000607805	MAP3K13	O43283	966 aa		22.26	■■□□□ 1.15
NECAB3-222	ENST00000607805	BEST1	O76090	585 aa		22.26	■■□□□ 1.15
NECAB3-222	ENST00000607805	ENG	P17813	658 aa		22.26	■■□□□ 1.15
NECAB3-222	ENST00000607805	GABRG2	P18507	467 aa		22.26	■■□□□ 1.15
NECAB3-222	ENST00000607805	ITPKA	P23677	461 aa		22.26	■■□□□ 1.15
NECAB3-222	ENST00000607805	DPP6	P42658	865 aa		22.26	■■□□□ 1.15
NECAB3-222	ENST00000607805	ZNF699	Q32M78	642 aa		22.26	■■□□□ 1.15
NECAB3-222	ENST00000607805	UAP1L1	Q3KQV9	507 aa		22.26	■■□□□ 1.15
NECAB3-222	ENST00000607805	ZNF667	Q5HYK9	610 aa		22.26	■■□□□ 1.15
NECAB3-222	ENST00000607805	HTR3D	Q70Z44	454 aa		22.26	■■□□□ 1.15
NECAB3-222	ENST00000607805	ARMCX6	Q7L4S7	300 aa		22.26	■■□□□ 1.15
NECAB3-222	ENST00000607805	ELMO3	Q96BJ8	720 aa		22.26	■■□□□ 1.15
NECAB3-222	ENST00000607805	TNIP3	Q96KP6	325 aa		22.26	■■□□□ 1.15
NECAB3-222	ENST00000607805	BLZF1	Q9H2G9	400 aa		22.26	■■□□□ 1.15
NECAB3-222	ENST00000607805	RALY	Q9UKM9	306 aa	Known RBP	22.26	■■□□□ 1.15
NECAB3-222	ENST00000607805	ZMIZ1	Q9ULJ6	1067 aa		22.26	■■□□□ 1.15
NECAB3-222	ENST00000607805	SH3BP1	Q9Y3L3	701 aa		22.26	■■□□□ 1.15

Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms