RNA–Protein interactions for RNA: ENST00000606952.5

PMF1-206, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 1,275 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-206ENST00000606952 TAF5Q15542 800 aa17.29■□□□□ 0.36
PMF1-206ENST00000606952 LRRC38Q5VT99 294 aa17.29■□□□□ 0.36
PMF1-206ENST00000606952 EMC1Q8N766 993 aa17.29■□□□□ 0.36
PMF1-206ENST00000606952 SCAMP5Q8TAC9 235 aa17.29■□□□□ 0.36
PMF1-206ENST00000606952 RXFP2Q8WXD0 754 aa17.29■□□□□ 0.36
PMF1-206ENST00000606952 OVCA2Q8WZ82 227 aa17.29■□□□□ 0.36
PMF1-206ENST00000606952 TRMT2BQ96GJ1 504 aaKnown RBP17.29■□□□□ 0.36
PMF1-206ENST00000606952 MYRFLQ96LU7 910 aa17.29■□□□□ 0.36
PMF1-206ENST00000606952 SEPT5Q99719 369 aaPredicted RBP17.29■□□□□ 0.36
PMF1-206ENST00000606952 GOLPH3Q9H4A6 298 aa17.29■□□□□ 0.36
PMF1-206ENST00000606952 POPDC2Q9HBU9 364 aa17.29■□□□□ 0.36
PMF1-206ENST00000606952 RRN3Q9NYV6 651 aa17.29■□□□□ 0.36
PMF1-206ENST00000606952 EHD2Q9NZN4 543 aa17.29■□□□□ 0.36
PMF1-206ENST00000606952 SLC27A5Q9Y2P5 690 aa17.29■□□□□ 0.36
PMF1-206ENST00000606952 INSL5Q9Y5Q6 135 aa17.29■□□□□ 0.36
PMF1-206ENST00000606952 CCDC66A2RUB6 948 aa17.28■□□□□ 0.36
PMF1-206ENST00000606952 SLC38A8A6NNN8 435 aa17.28■□□□□ 0.36
PMF1-206ENST00000606952 YJEFN3A6XGL0 299 aa17.28■□□□□ 0.36
PMF1-206ENST00000606952 HIDE1A8MVS5 230 aa17.28■□□□□ 0.36
PMF1-206ENST00000606952 E7ENQ6 273 aa17.28■□□□□ 0.36
PMF1-206ENST00000606952 DDX3YO15523 660 aaKnown RBP17.28■□□□□ 0.36
PMF1-206ENST00000606952 TGM5O43548 720 aa17.28■□□□□ 0.36
PMF1-206ENST00000606952 PSTPIP1O43586 416 aa17.28■□□□□ 0.36
PMF1-206ENST00000606952 ENDOD1O94919 500 aa17.28■□□□□ 0.36
PMF1-206ENST00000606952 PAPLNO95428 1278 aa17.28■□□□□ 0.36
PMF1-206ENST00000606952 FYNP06241 537 aa17.28■□□□□ 0.36
PMF1-206ENST00000606952 PSMA2P25787 234 aa17.28■□□□□ 0.36
PMF1-206ENST00000606952 CTNNA1P35221 906 aaKnown RBP17.28■□□□□ 0.36
PMF1-206ENST00000606952 NOS2P35228 1153 aa17.28■□□□□ 0.36
PMF1-206ENST00000606952 PCK1P35558 622 aa17.28■□□□□ 0.36
PMF1-206ENST00000606952 CLCN4P51793 760 aa17.28■□□□□ 0.36
PMF1-206ENST00000606952 CDR1P51861 262 aa17.28■□□□□ 0.36
PMF1-206ENST00000606952 PLD1Q13393 1074 aa17.28■□□□□ 0.36
PMF1-206ENST00000606952 TUBB2AQ13885 445 aa17.28■□□□□ 0.36
PMF1-206ENST00000606952 CCDC14Q49A88 953 aa17.28■□□□□ 0.36
PMF1-206ENST00000606952 PLPP4Q5VZY2 271 aa17.28■□□□□ 0.36
PMF1-206ENST00000606952 PPP2R2DQ66LE6 453 aa17.28■□□□□ 0.36
PMF1-206ENST00000606952 CCDC149Q6ZUS6 474 aa17.28■□□□□ 0.36
PMF1-206ENST00000606952 STRADAQ7RTN6 431 aa17.28■□□□□ 0.36
PMF1-206ENST00000606952 ARHGAP18Q8N392 663 aa17.28■□□□□ 0.36
PMF1-206ENST00000606952 ZNF276Q8N554 614 aa17.28■□□□□ 0.36
PMF1-206ENST00000606952 HDAC7Q8WUI4 952 aa17.28■□□□□ 0.36
PMF1-206ENST00000606952 PGAP3Q96FM1 320 aaPredicted RBP17.28■□□□□ 0.36
PMF1-206ENST00000606952 NPY6RQ99463 290 aa17.28■□□□□ 0.36
PMF1-206ENST00000606952 TUBB2BQ9BVA1 445 aa17.28■□□□□ 0.36
PMF1-206ENST00000606952 TMEM51Q9NW97 253 aa17.28■□□□□ 0.36
PMF1-206ENST00000606952 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.28■□□□□ 0.36
PMF1-206ENST00000606952 SNX12Q9UMY4 172 aa17.28■□□□□ 0.36
PMF1-206ENST00000606952 PCDHA3Q9Y5H8 950 aa17.28■□□□□ 0.36
PMF1-206ENST00000606952 OBSL1O75147 1896 aa17.28■□□□□ 0.36
PMF1-206ENST00000606952 DENND4CQ5VZ89 1909 aa17.27■□□□□ 0.36
PMF1-206ENST00000606952 LRCH4O75427 683 aa17.27■□□□□ 0.36
PMF1-206ENST00000606952 ZDHHC11BP0C7U3 371 aa17.27■□□□□ 0.36
PMF1-206ENST00000606952 CSH1P0DML2 217 aa17.27■□□□□ 0.36
PMF1-206ENST00000606952 CSH2P0DML3 217 aa17.27■□□□□ 0.36
PMF1-206ENST00000606952 PDGFRAP16234 1089 aa17.27■□□□□ 0.36
PMF1-206ENST00000606952 YWHAQP27348 245 aa17.27■□□□□ 0.36
PMF1-206ENST00000606952 SDC4P31431 198 aa17.27■□□□□ 0.36
PMF1-206ENST00000606952 IRS1P35568 1242 aa17.27■□□□□ 0.36
PMF1-206ENST00000606952 PSEN1P49768 467 aa17.27■□□□□ 0.36
PMF1-206ENST00000606952 PEX5P50542 639 aa17.27■□□□□ 0.36
PMF1-206ENST00000606952 USP46P62068 366 aa17.27■□□□□ 0.36
PMF1-206ENST00000606952 RPS6KA1Q15418 735 aa17.27■□□□□ 0.36
PMF1-206ENST00000606952 SLC25A52Q3SY17 297 aa17.27■□□□□ 0.36
PMF1-206ENST00000606952 SDHAF4Q5VUM1 108 aa17.27■□□□□ 0.36
PMF1-206ENST00000606952 OTUD1Q5VV17 481 aaPredicted RBP17.27■□□□□ 0.36
PMF1-206ENST00000606952 SNX30Q5VWJ9 437 aa17.27■□□□□ 0.36
PMF1-206ENST00000606952 HFE2Q6ZVN8 426 aa17.27■□□□□ 0.36
PMF1-206ENST00000606952 POLNQ7Z5Q5 900 aa17.27■□□□□ 0.36
PMF1-206ENST00000606952 SCD5Q86SK9 330 aa17.27■□□□□ 0.36
PMF1-206ENST00000606952 MON1AQ86VX9 555 aa17.27■□□□□ 0.36
PMF1-206ENST00000606952 DEFB106AQ8N104 65 aa17.27■□□□□ 0.36
PMF1-206ENST00000606952 ARFGAP1Q8N6T3 406 aa17.27■□□□□ 0.36
PMF1-206ENST00000606952 NDRG1Q92597 394 aaKnown RBP17.27■□□□□ 0.36
PMF1-206ENST00000606952 L2HGDHQ9H9P8 463 aa17.27■□□□□ 0.36
PMF1-206ENST00000606952 SLC28A3Q9HAS3 691 aa17.27■□□□□ 0.36
PMF1-206ENST00000606952 CYP4F11Q9HBI6 524 aa17.27■□□□□ 0.36
PMF1-206ENST00000606952 CLIC5Q9NZA1 410 aa17.27■□□□□ 0.36
PMF1-206ENST00000606952 HYOU1Q9Y4L1 999 aa17.27■□□□□ 0.36
PMF1-206ENST00000606952 ASB3Q9Y575 518 aa17.27■□□□□ 0.36
PMF1-206ENST00000606952 ANAPC1Q9H1A4 1944 aa17.26■□□□□ 0.35
PMF1-206ENST00000606952 ENC1O14682 589 aa17.26■□□□□ 0.35
PMF1-206ENST00000606952 SPOPO43791 374 aa17.26■□□□□ 0.35
PMF1-206ENST00000606952 LPXNO60711 386 aa17.26■□□□□ 0.35
PMF1-206ENST00000606952 GRAP2O75791 330 aa17.26■□□□□ 0.35
PMF1-206ENST00000606952 SOAT2O75908 522 aa17.26■□□□□ 0.35
PMF1-206ENST00000606952 GLUD1P00367 558 aa17.26■□□□□ 0.35
PMF1-206ENST00000606952 IGLV3-25P01717 112 aa17.26■□□□□ 0.35
PMF1-206ENST00000606952 POU2F2P09086 479 aa17.26■□□□□ 0.35
PMF1-206ENST00000606952 HMGA1P17096 107 aaKnown RBP17.26■□□□□ 0.35
PMF1-206ENST00000606952 TCP1P17987 556 aaKnown RBP17.26■□□□□ 0.35
PMF1-206ENST00000606952 HOXA9P31269 272 aa17.26■□□□□ 0.35
PMF1-206ENST00000606952 ELF1P32519 619 aa17.26■□□□□ 0.35
PMF1-206ENST00000606952 ALDH1A3P47895 512 aa17.26■□□□□ 0.35
PMF1-206ENST00000606952 YWHAGP61981 247 aaKnown RBP eCLIP17.26■□□□□ 0.35
PMF1-206ENST00000606952 SLC25A11Q02978 314 aaKnown RBP17.26■□□□□ 0.35
PMF1-206ENST00000606952 EIF4EBP2Q13542 120 aaPredicted RBP17.26■□□□□ 0.35
PMF1-206ENST00000606952 BSPRYQ5W0U4 402 aa17.26■□□□□ 0.35
PMF1-206ENST00000606952 MSANTD2Q6P1R3 559 aa17.26■□□□□ 0.35
PMF1-206ENST00000606952 CPNE8Q86YQ8 564 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms