RNA–Protein interactions for RNA: ENST00000604030.6

SH3D19-211, Transcript of SH3 domain containing 19, humanhuman

TSL 5 BASIC

Gene SH3D19, Length 5,228 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-211ENST00000604030 RABGEF1Q9UJ41 708 aa21.74■■□□□ 1.07
SH3D19-211ENST00000604030 FAM237AA0A1B0GTK4 181 aa21.74■■□□□ 1.07
SH3D19-211ENST00000604030 ZBTB49Q6ZSB9 765 aa21.74■■□□□ 1.07
SH3D19-211ENST00000604030 TKTP29401 623 aaKnown RBP21.74■■□□□ 1.07
SH3D19-211ENST00000604030 CCDC15Q0P6D6 951 aa21.74■■□□□ 1.07
SH3D19-211ENST00000604030 OASLQ15646 514 aaKnown RBP21.74■■□□□ 1.07
SH3D19-211ENST00000604030 DGKDQ16760 1214 aa21.74■■□□□ 1.07
SH3D19-211ENST00000604030 OTULINQ96BN8 352 aa21.74■■□□□ 1.07
SH3D19-211ENST00000604030 ITM2BQ9Y287 266 aa21.74■■□□□ 1.07
SH3D19-211ENST00000604030 IQCA1LA6NCM1 817 aa21.74■■□□□ 1.07
SH3D19-211ENST00000604030 TNFAIP8O95379 198 aa21.74■■□□□ 1.07
SH3D19-211ENST00000604030 GRTP1Q5TC63 336 aa21.74■■□□□ 1.07
SH3D19-211ENST00000604030 MCOLN2Q8IZK6 566 aa21.74■■□□□ 1.07
SH3D19-211ENST00000604030 ZFYVE19Q96K21 471 aa21.74■■□□□ 1.07
SH3D19-211ENST00000604030 COPG2Q9UBF2 871 aa21.74■■□□□ 1.07
SH3D19-211ENST00000604030 CRLS1Q9UJA2 301 aa21.74■■□□□ 1.07
SH3D19-211ENST00000604030 ABT1Q9ULW3 272 aaKnown RBP21.74■■□□□ 1.07
SH3D19-211ENST00000604030 TBL3Q12788 808 aaKnown RBP21.73■■□□□ 1.07
SH3D19-211ENST00000604030 NFYCQ13952 458 aa21.73■■□□□ 1.07
SH3D19-211ENST00000604030 MREGQ8N565 214 aa21.73■■□□□ 1.07
SH3D19-211ENST00000604030 AGBL1Q96MI9 1066 aa21.73■■□□□ 1.07
SH3D19-211ENST00000604030 TAAR1Q96RJ0 339 aa21.73■■□□□ 1.07
SH3D19-211ENST00000604030 KRCC1Q9NPI7 259 aaPredicted RBP21.73■■□□□ 1.07
SH3D19-211ENST00000604030 ANKRD6Q9Y2G4 727 aa21.73■■□□□ 1.07
SH3D19-211ENST00000604030 CHD1O14646 1710 aa21.73■■□□□ 1.07
SH3D19-211ENST00000604030 SUPT20HL2P0C7V6 817 aa21.73■■□□□ 1.07
SH3D19-211ENST00000604030 TFE3P19532 575 aaPredicted RBP21.73■■□□□ 1.07
SH3D19-211ENST00000604030 BGNP21810 368 aa21.73■■□□□ 1.07
SH3D19-211ENST00000604030 TDRD5Q8NAT2 981 aaKnown RBP21.73■■□□□ 1.07
SH3D19-211ENST00000604030 FAM172AQ8WUF8 416 aa21.73■■□□□ 1.07
SH3D19-211ENST00000604030 LRRC39Q96DD0 335 aa21.73■■□□□ 1.07
SH3D19-211ENST00000604030 CATSPER2Q96P56 530 aa21.73■■□□□ 1.07
SH3D19-211ENST00000604030 NRDE2Q9H7Z3 1164 aa21.73■■□□□ 1.07
SH3D19-211ENST00000604030 TWF1Q12792 350 aa21.73■■□□□ 1.07
SH3D19-211ENST00000604030 SNAPC2Q13487 334 aa21.73■■□□□ 1.07
SH3D19-211ENST00000604030 PKN1Q16512 942 aa21.73■■□□□ 1.07
SH3D19-211ENST00000604030 TRAF7Q6Q0C0 670 aa21.73■■□□□ 1.07
SH3D19-211ENST00000604030 PARK7Q99497 189 aaKnown RBP21.73■■□□□ 1.07
SH3D19-211ENST00000604030 CBWD1Q9BRT8 395 aa21.73■■□□□ 1.07
SH3D19-211ENST00000604030 PRRG3Q9BZD7 231 aa21.73■■□□□ 1.07
SH3D19-211ENST00000604030 KCTD10Q9H3F6 313 aa21.73■■□□□ 1.07
SH3D19-211ENST00000604030 HOXB8P17481 243 aaPredicted RBP21.73■■□□□ 1.07
SH3D19-211ENST00000604030 FGFR2P21802 821 aa21.73■■□□□ 1.07
SH3D19-211ENST00000604030 ERVK-9P63128 1117 aa21.73■■□□□ 1.07
SH3D19-211ENST00000604030 ZNF268Q14587 947 aaPredicted RBP21.73■■□□□ 1.07
SH3D19-211ENST00000604030 TMEM119Q4V9L6 283 aa21.73■■□□□ 1.07
SH3D19-211ENST00000604030 PCNX4Q63HM2 1172 aa21.73■■□□□ 1.07
SH3D19-211ENST00000604030 STRA8Q7Z7C7 330 aa21.73■■□□□ 1.07
SH3D19-211ENST00000604030 SNUPNO95149 360 aaKnown RBP21.73■■□□□ 1.07
SH3D19-211ENST00000604030 MKRN4PQ13434 485 aaPredicted RBP21.73■■□□□ 1.07
SH3D19-211ENST00000604030 IYDQ6PHW0 289 aa21.73■■□□□ 1.07
SH3D19-211ENST00000604030 AGBL3Q8NEM8 1001 aa21.73■■□□□ 1.07
SH3D19-211ENST00000604030 BBS2Q9BXC9 721 aa21.73■■□□□ 1.07
SH3D19-211ENST00000604030 PIDD1Q9HB75 910 aa21.73■■□□□ 1.07
SH3D19-211ENST00000604030 TBC1D13Q9NVG8 400 aa21.73■■□□□ 1.07
SH3D19-211ENST00000604030 CPS1P31327 1500 aa21.72■■□□□ 1.07
SH3D19-211ENST00000604030 SKAP2O75563 359 aaPredicted RBP21.72■■□□□ 1.07
SH3D19-211ENST00000604030 ETFBP38117 255 aa21.72■■□□□ 1.07
SH3D19-211ENST00000604030 GP5P40197 560 aa21.72■■□□□ 1.07
SH3D19-211ENST00000604030 ZNF512Q96ME7 567 aaPredicted RBP21.72■■□□□ 1.07
SH3D19-211ENST00000604030 TCF7L2Q9NQB0 619 aa21.72■■□□□ 1.07
SH3D19-211ENST00000604030 AP4E1Q9UPM8 1137 aa21.72■■□□□ 1.07
SH3D19-211ENST00000604030 ATF5Q9Y2D1 282 aaPredicted RBP21.72■■□□□ 1.07
SH3D19-211ENST00000604030 PCDHGC5Q9Y5F6 944 aa21.72■■□□□ 1.07
SH3D19-211ENST00000604030 MROH7Q68CQ1 1323 aa21.72■■□□□ 1.07
SH3D19-211ENST00000604030 RNF103O00237 685 aa21.72■■□□□ 1.07
SH3D19-211ENST00000604030 TRDMT1O14717 391 aaKnown RBP21.72■■□□□ 1.07
SH3D19-211ENST00000604030 NPTXRO95502 500 aa21.72■■□□□ 1.07
SH3D19-211ENST00000604030 ZCCHC18P0CG32 403 aa21.72■■□□□ 1.07
SH3D19-211ENST00000604030 RRM2P31350 389 aa21.72■■□□□ 1.07
SH3D19-211ENST00000604030 CNTN1Q12860 1018 aa21.72■■□□□ 1.07
SH3D19-211ENST00000604030 CCDC103Q8IW40 242 aa21.72■■□□□ 1.07
SH3D19-211ENST00000604030 PRKD2Q9BZL6 878 aa21.72■■□□□ 1.07
SH3D19-211ENST00000604030 TPBGLP0DKB5 382 aa21.72■■□□□ 1.07
SH3D19-211ENST00000604030 TSHRP16473 764 aa21.72■■□□□ 1.07
SH3D19-211ENST00000604030 FASP25445 335 aa21.72■■□□□ 1.07
SH3D19-211ENST00000604030 RXRGP48443 463 aa21.72■■□□□ 1.07
SH3D19-211ENST00000604030 PPP3CCP48454 512 aa21.72■■□□□ 1.07
SH3D19-211ENST00000604030 PRIM2P49643 509 aa21.72■■□□□ 1.07
SH3D19-211ENST00000604030 SNX30Q5VWJ9 437 aa21.72■■□□□ 1.07
SH3D19-211ENST00000604030 ERO1BQ86YB8 467 aa21.72■■□□□ 1.07
SH3D19-211ENST00000604030 ACTL9Q8TC94 416 aa21.72■■□□□ 1.07
SH3D19-211ENST00000604030 STK32AQ8WU08 396 aa21.72■■□□□ 1.07
SH3D19-211ENST00000604030 POLG2Q9UHN1 485 aa21.72■■□□□ 1.07
SH3D19-211ENST00000604030 SYNDIG1LA6NDD5 238 aa21.72■■□□□ 1.07
SH3D19-211ENST00000604030 CYTH3O43739 400 aa21.72■■□□□ 1.07
SH3D19-211ENST00000604030 ASMTLO95671 621 aa21.72■■□□□ 1.07
SH3D19-211ENST00000604030 TCF7P36402 384 aaPredicted RBP21.72■■□□□ 1.07
SH3D19-211ENST00000604030 SLC11A2P49281 568 aa21.72■■□□□ 1.07
SH3D19-211ENST00000604030 ZNF135P52742 658 aaPredicted RBP21.72■■□□□ 1.07
SH3D19-211ENST00000604030 FAXCQ5TGI0 409 aa21.72■■□□□ 1.07
SH3D19-211ENST00000604030 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.72■■□□□ 1.07
SH3D19-211ENST00000604030 SPIRE2Q8WWL2 714 aa21.72■■□□□ 1.07
SH3D19-211ENST00000604030 OXNAD1Q96HP4 312 aaPredicted RBP21.72■■□□□ 1.07
SH3D19-211ENST00000604030 F8W810 466 aa21.71■■□□□ 1.07
SH3D19-211ENST00000604030 UBDO15205 165 aa21.71■■□□□ 1.07
SH3D19-211ENST00000604030 NR2C2P49116 596 aa21.71■■□□□ 1.07
SH3D19-211ENST00000604030 NCKAP1LP55160 1127 aa21.71■■□□□ 1.07
SH3D19-211ENST00000604030 CRELD2Q6UXH1 353 aaPredicted RBP21.71■■□□□ 1.07
SH3D19-211ENST00000604030 NT5DC3Q86UY8 548 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms