RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 NUP93Q8N1F7 819 aa17.82■□□□□ 0.44
USE1-208ENST00000600970 PDZD8Q8NEN9 1154 aa17.82■□□□□ 0.44
USE1-208ENST00000600970 OVCA2Q8WZ82 227 aa17.82■□□□□ 0.44
USE1-208ENST00000600970 B3GNT5Q9BYG0 378 aa17.82■□□□□ 0.44
USE1-208ENST00000600970 SPHK2Q9NRA0 654 aa17.82■□□□□ 0.44
USE1-208ENST00000600970 SH3BP1Q9Y3L3 701 aa17.82■□□□□ 0.44
USE1-208ENST00000600970 STARD13Q9Y3M8 1113 aa17.82■□□□□ 0.44
USE1-208ENST00000600970 FREM2Q5SZK8 3169 aa17.81■□□□□ 0.44
USE1-208ENST00000600970 A0A1W2PQD8 194 aa17.81■□□□□ 0.44
USE1-208ENST00000600970 SH3BP5O60239 455 aa17.81■□□□□ 0.44
USE1-208ENST00000600970 SYPP08247 313 aa17.81■□□□□ 0.44
USE1-208ENST00000600970 FAM163BP0C2L3 166 aa17.81■□□□□ 0.44
USE1-208ENST00000600970 SCAPQ12770 1279 aa17.81■□□□□ 0.44
USE1-208ENST00000600970 TMEM25Q86YD3 366 aa17.81■□□□□ 0.44
USE1-208ENST00000600970 FBXO32Q969P5 355 aa17.81■□□□□ 0.44
USE1-208ENST00000600970 WBP2Q969T9 261 aa17.81■□□□□ 0.44
USE1-208ENST00000600970 HSPA12BQ96MM6 686 aa17.81■□□□□ 0.44
USE1-208ENST00000600970 CLIC6Q96NY7 704 aa17.81■□□□□ 0.44
USE1-208ENST00000600970 DUSP9Q99956 384 aaKnown RBP17.81■□□□□ 0.44
USE1-208ENST00000600970 CD248Q9HCU0 757 aa17.81■□□□□ 0.44
USE1-208ENST00000600970 CHORDC1Q9UHD1 332 aaPredicted RBP17.81■□□□□ 0.44
USE1-208ENST00000600970 GPSM3Q9Y4H4 160 aa17.81■□□□□ 0.44
USE1-208ENST00000600970 SRPRBQ9Y5M8 271 aaKnown RBP17.81■□□□□ 0.44
USE1-208ENST00000600970 GON4LQ3T8J9 2241 aa17.8■□□□□ 0.44
USE1-208ENST00000600970 ZNF217O75362 1048 aa17.8■□□□□ 0.44
USE1-208ENST00000600970 GJB3O75712 270 aa17.8■□□□□ 0.44
USE1-208ENST00000600970 RTN3O95197 1032 aaPredicted RBP17.8■□□□□ 0.44
USE1-208ENST00000600970 NDUFV2P19404 249 aa17.8■□□□□ 0.44
USE1-208ENST00000600970 TXLNAP40222 546 aa17.8■□□□□ 0.44
USE1-208ENST00000600970 SLC14A1Q13336 389 aa17.8■□□□□ 0.44
USE1-208ENST00000600970 TRIP6Q15654 476 aaKnown RBP17.8■□□□□ 0.44
USE1-208ENST00000600970 ANO4Q32M45 955 aa17.8■□□□□ 0.44
USE1-208ENST00000600970 HECTD3Q5T447 861 aa17.8■□□□□ 0.44
USE1-208ENST00000600970 SNX30Q5VWJ9 437 aa17.8■□□□□ 0.44
USE1-208ENST00000600970 EGFLAMQ63HQ2 1017 aa17.8■□□□□ 0.44
USE1-208ENST00000600970 NUDT18Q6ZVK8 323 aa17.8■□□□□ 0.44
USE1-208ENST00000600970 TRIML1Q8N9V2 468 aa17.8■□□□□ 0.44
USE1-208ENST00000600970 B3GALNT2Q8NCR0 500 aa17.8■□□□□ 0.44
USE1-208ENST00000600970 GLIS3Q8NEA6 775 aa17.8■□□□□ 0.44
USE1-208ENST00000600970 IPO4Q8TEX9 1081 aaKnown RBP17.8■□□□□ 0.44
USE1-208ENST00000600970 KCNK16Q96T55 309 aa17.8■□□□□ 0.44
USE1-208ENST00000600970 ACOX2Q99424 681 aa17.8■□□□□ 0.44
USE1-208ENST00000600970 CCSER2Q9H7U1 834 aa17.8■□□□□ 0.44
USE1-208ENST00000600970 HSPBP1Q9NZL4 362 aa17.8■□□□□ 0.44
USE1-208ENST00000600970 CYP8B1Q9UNU6 501 aa17.8■□□□□ 0.44
USE1-208ENST00000600970 PLXNB3Q9ULL4 1909 aa17.8■□□□□ 0.44
USE1-208ENST00000600970 PKD1L2Q7Z442 2459 aa17.79■□□□□ 0.44
USE1-208ENST00000600970 NBEAQ8NFP9 2946 aa17.79■□□□□ 0.44
USE1-208ENST00000600970 A0A087X0B3 334 aa17.79■□□□□ 0.44
USE1-208ENST00000600970 A8MXQ7 604 aa17.79■□□□□ 0.44
USE1-208ENST00000600970 TNNC1P63316 161 aa17.79■□□□□ 0.44
USE1-208ENST00000600970 PLEKHG6Q3KR16 790 aa17.79■□□□□ 0.44
USE1-208ENST00000600970 WDR72Q3MJ13 1102 aa17.79■□□□□ 0.44
USE1-208ENST00000600970 C8orf34Q49A92 452 aa17.79■□□□□ 0.44
USE1-208ENST00000600970 C19orf48Q6RUI8 117 aa17.79■□□□□ 0.44
USE1-208ENST00000600970 SCAMP5Q8TAC9 235 aa17.79■□□□□ 0.44
USE1-208ENST00000600970 ADAMTS14Q8WXS8 1223 aa17.79■□□□□ 0.44
USE1-208ENST00000600970 ERLEC1Q96DZ1 483 aa17.79■□□□□ 0.44
USE1-208ENST00000600970 ZNF419Q96HQ0 510 aaPredicted RBP17.79■□□□□ 0.44
USE1-208ENST00000600970 KIAA1586Q9HCI6 787 aa17.79■□□□□ 0.44
USE1-208ENST00000600970 CD93Q9NPY3 652 aa17.79■□□□□ 0.44
USE1-208ENST00000600970 LAMA5O15230 3695 aa17.79■□□□□ 0.44
USE1-208ENST00000600970 CACNA1EQ15878 2313 aa17.78■□□□□ 0.44
USE1-208ENST00000600970 ZBTB24O43167 697 aaPredicted RBP17.78■□□□□ 0.44
USE1-208ENST00000600970 DLATP10515 647 aaKnown RBP17.78■□□□□ 0.44
USE1-208ENST00000600970 IRF1P10914 325 aa17.78■□□□□ 0.44
USE1-208ENST00000600970 TNNI1P19237 187 aa17.78■□□□□ 0.44
USE1-208ENST00000600970 HOXD13P35453 343 aa17.78■□□□□ 0.44
USE1-208ENST00000600970 STAT6P42226 847 aa17.78■□□□□ 0.44
USE1-208ENST00000600970 TUBP50607 506 aa17.78■□□□□ 0.44
USE1-208ENST00000600970 GRAMD4Q6IC98 578 aa17.78■□□□□ 0.44
USE1-208ENST00000600970 SDE2Q6IQ49 451 aa17.78■□□□□ 0.44
USE1-208ENST00000600970 CCDC73Q6ZRK6 1079 aa17.78■□□□□ 0.44
USE1-208ENST00000600970 CCDC65Q8IXS2 484 aa17.78■□□□□ 0.44
USE1-208ENST00000600970 CHPFQ8IZ52 775 aa17.78■□□□□ 0.44
USE1-208ENST00000600970 RGL4Q8IZJ4 473 aa17.78■□□□□ 0.44
USE1-208ENST00000600970 PNPLA1Q8N8W4 532 aa17.78■□□□□ 0.44
USE1-208ENST00000600970 RDH13Q8NBN7 331 aa17.78■□□□□ 0.44
USE1-208ENST00000600970 HPS3Q969F9 1004 aa17.78■□□□□ 0.44
USE1-208ENST00000600970 PANK2Q9BZ23 570 aa17.78■□□□□ 0.44
USE1-208ENST00000600970 DNAJC17Q9NVM6 304 aaKnown RBP17.78■□□□□ 0.44
USE1-208ENST00000600970 IL37Q9NZH6 218 aa17.78■□□□□ 0.44
USE1-208ENST00000600970 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.78■□□□□ 0.44
USE1-208ENST00000600970 PCDHB9Q9Y5E1 797 aa17.78■□□□□ 0.44
USE1-208ENST00000600970 ZFYVE26Q68DK2 2539 aa17.77■□□□□ 0.44
USE1-208ENST00000600970 ZDHHC11BP0C7U3 371 aa17.77■□□□□ 0.44
USE1-208ENST00000600970 FTH1P19P0C7X4 201 aa17.77■□□□□ 0.44
USE1-208ENST00000600970 SLC5A3P53794 718 aa17.77■□□□□ 0.44
USE1-208ENST00000600970 PAQR9Q6ZVX9 377 aa17.77■□□□□ 0.44
USE1-208ENST00000600970 STXBP4Q6ZWJ1 553 aa17.77■□□□□ 0.44
USE1-208ENST00000600970 NAXDQ8IW45 347 aa17.77■□□□□ 0.44
USE1-208ENST00000600970 CGRRF1Q99675 332 aa17.77■□□□□ 0.44
USE1-208ENST00000600970 GABRG3Q99928 467 aa17.77■□□□□ 0.44
USE1-208ENST00000600970 SLC6A17Q9H1V8 727 aa17.77■□□□□ 0.44
USE1-208ENST00000600970 FAM124BQ9H5Z6 455 aaPredicted RBP17.77■□□□□ 0.44
USE1-208ENST00000600970 GMIPQ9P107 970 aa17.77■□□□□ 0.44
USE1-208ENST00000600970 RAD54BQ9Y620 910 aa17.77■□□□□ 0.44
USE1-208ENST00000600970 PTPRBP23467 1997 aa17.77■□□□□ 0.43
USE1-208ENST00000600970 PRRT4C9JH25 899 aa17.76■□□□□ 0.43
USE1-208ENST00000600970 CACNG3O60359 315 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms