RNA–Protein interactions for RNA: ENST00000596814.5

VRK3-212, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,736 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-212ENST00000596814 ALDH1A3P47895 512 aa15.36■□□□□ 0.05
VRK3-212ENST00000596814 ZNF143P52747 638 aaPredicted RBP15.36■□□□□ 0.05
VRK3-212ENST00000596814 SMAD3P84022 425 aaKnown RBP15.36■□□□□ 0.05
VRK3-212ENST00000596814 PIGHQ14442 188 aaPredicted RBP15.36■□□□□ 0.05
VRK3-212ENST00000596814 TRNP1Q6NT89 227 aa15.36■□□□□ 0.05
VRK3-212ENST00000596814 BHLHA9Q7RTU4 235 aa15.36■□□□□ 0.05
VRK3-212ENST00000596814 NIPA2Q8N8Q9 360 aa15.36■□□□□ 0.05
VRK3-212ENST00000596814 GIPC2Q8TF65 315 aa15.36■□□□□ 0.05
VRK3-212ENST00000596814 RXFP2Q8WXD0 754 aa15.36■□□□□ 0.05
VRK3-212ENST00000596814 GOLGA1Q92805 767 aa15.36■□□□□ 0.05
VRK3-212ENST00000596814 TIFAQ96CG3 184 aa15.36■□□□□ 0.05
VRK3-212ENST00000596814 LMAN2LQ9H0V9 348 aa15.36■□□□□ 0.05
VRK3-212ENST00000596814 PRO3102Q9H379 93 aa15.36■□□□□ 0.05
VRK3-212ENST00000596814 POPDC2Q9HBU9 364 aa15.36■□□□□ 0.05
VRK3-212ENST00000596814 FBXW11Q9UKB1 542 aa15.36■□□□□ 0.05
VRK3-212ENST00000596814 SCML2Q9UQR0 700 aa15.36■□□□□ 0.05
VRK3-212ENST00000596814 INSL5Q9Y5Q6 135 aa15.36■□□□□ 0.05
VRK3-212ENST00000596814 SLC38A8A6NNN8 435 aa15.35■□□□□ 0.05
VRK3-212ENST00000596814 DPYSL4O14531 572 aa15.35■□□□□ 0.05
VRK3-212ENST00000596814 NCK2O43639 380 aa15.35■□□□□ 0.05
VRK3-212ENST00000596814 LTFP02788 710 aa15.35■□□□□ 0.05
VRK3-212ENST00000596814 ATP1A1P05023 1023 aaKnown RBP15.35■□□□□ 0.05
VRK3-212ENST00000596814 DESP17661 470 aa15.35■□□□□ 0.05
VRK3-212ENST00000596814 SDC4P31431 198 aa15.35■□□□□ 0.05
VRK3-212ENST00000596814 USP46P62068 366 aa15.35■□□□□ 0.05
VRK3-212ENST00000596814 YWHAZP63104 245 aaKnown RBP15.35■□□□□ 0.05
VRK3-212ENST00000596814 MEI1Q5TIA1 1274 aa15.35■□□□□ 0.05
VRK3-212ENST00000596814 HFE2Q6ZVN8 426 aa15.35■□□□□ 0.05
VRK3-212ENST00000596814 CPNE8Q86YQ8 564 aa15.35■□□□□ 0.05
VRK3-212ENST00000596814 GDPD5Q8WTR4 605 aa15.35■□□□□ 0.05
VRK3-212ENST00000596814 COMMD8Q9NX08 183 aa15.35■□□□□ 0.05
VRK3-212ENST00000596814 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.35■□□□□ 0.05
VRK3-212ENST00000596814 IL37Q9NZH6 218 aa15.35■□□□□ 0.05
VRK3-212ENST00000596814 PACSIN2Q9UNF0 486 aaPredicted RBP15.35■□□□□ 0.05
VRK3-212ENST00000596814 USTQ9Y2C2 406 aa15.35■□□□□ 0.05
VRK3-212ENST00000596814 CHD7Q9P2D1 2997 aa15.35■□□□□ 0.05
VRK3-212ENST00000596814 MTCL1Q9Y4B5 1905 aaKnown RBP15.35■□□□□ 0.05
VRK3-212ENST00000596814 YWHAQP27348 245 aa15.34■□□□□ 0.05
VRK3-212ENST00000596814 MATKP42679 507 aa15.34■□□□□ 0.05
VRK3-212ENST00000596814 TWF1Q12792 350 aa15.34■□□□□ 0.05
VRK3-212ENST00000596814 PLD1Q13393 1074 aa15.34■□□□□ 0.05
VRK3-212ENST00000596814 MTMR3Q13615 1198 aa15.34■□□□□ 0.05
VRK3-212ENST00000596814 VEPH1Q14D04 833 aa15.34■□□□□ 0.05
VRK3-212ENST00000596814 LILRA6Q6PI73 481 aa15.34■□□□□ 0.05
VRK3-212ENST00000596814 DEFB106AQ8N104 65 aa15.34■□□□□ 0.05
VRK3-212ENST00000596814 FBXO32Q969P5 355 aa15.34■□□□□ 0.05
VRK3-212ENST00000596814 CFAP57Q96MR6 1250 aa15.34■□□□□ 0.05
VRK3-212ENST00000596814 SLC2A13Q96QE2 648 aa15.34■□□□□ 0.05
VRK3-212ENST00000596814 CNPY3Q9BT09 278 aa15.34■□□□□ 0.05
VRK3-212ENST00000596814 TRIM62Q9BVG3 475 aa15.34■□□□□ 0.05
VRK3-212ENST00000596814 TLR10Q9BXR5 811 aa15.34■□□□□ 0.05
VRK3-212ENST00000596814 EHD2Q9NZN4 543 aa15.34■□□□□ 0.05
VRK3-212ENST00000596814 FAM92AA1XBS5 289 aa15.34■□□□□ 0.05
VRK3-212ENST00000596814 CAPN9O14815 690 aa15.34■□□□□ 0.05
VRK3-212ENST00000596814 SPATA31D3P0C874 917 aa15.34■□□□□ 0.05
VRK3-212ENST00000596814 CSH1P0DML2 217 aa15.34■□□□□ 0.05
VRK3-212ENST00000596814 CSH2P0DML3 217 aa15.34■□□□□ 0.05
VRK3-212ENST00000596814 PTPN9P43378 593 aa15.34■□□□□ 0.05
VRK3-212ENST00000596814 DNA2P51530 1060 aa15.34■□□□□ 0.05
VRK3-212ENST00000596814 CLCN4P51793 760 aa15.34■□□□□ 0.05
VRK3-212ENST00000596814 YWHAGP61981 247 aaKnown RBP eCLIP15.34■□□□□ 0.05
VRK3-212ENST00000596814 ACAP1Q15027 740 aa15.34■□□□□ 0.05
VRK3-212ENST00000596814 RPS6KA1Q15418 735 aa15.34■□□□□ 0.05
VRK3-212ENST00000596814 CCDC14Q49A88 953 aa15.34■□□□□ 0.05
VRK3-212ENST00000596814 DAB2IPQ5VWQ8 1189 aa15.34■□□□□ 0.05
VRK3-212ENST00000596814 SPATA31D4Q6ZUB0 917 aa15.34■□□□□ 0.05
VRK3-212ENST00000596814 CCDC149Q6ZUS6 474 aa15.34■□□□□ 0.05
VRK3-212ENST00000596814 KREMEN2Q8NCW0 462 aa15.34■□□□□ 0.05
VRK3-212ENST00000596814 SLC7A14Q8TBB6 771 aa15.34■□□□□ 0.05
VRK3-212ENST00000596814 UBE2Q2Q8WVN8 375 aa15.34■□□□□ 0.05
VRK3-212ENST00000596814 DDX23Q9BUQ8 820 aaKnown RBP15.34■□□□□ 0.05
VRK3-212ENST00000596814 MYO7AQ13402 2215 aa15.34■□□□□ 0.05
VRK3-212ENST00000596814 LAMA3Q16787 3333 aa15.33■□□□□ 0.04
VRK3-212ENST00000596814 EPOPA6NHQ4 379 aa15.33■□□□□ 0.04
VRK3-212ENST00000596814 MIF4GDA9UHW6 222 aaKnown RBP15.33■□□□□ 0.04
VRK3-212ENST00000596814 RNF8O76064 485 aa15.33■□□□□ 0.04
VRK3-212ENST00000596814 C8AP07357 584 aa15.33■□□□□ 0.04
VRK3-212ENST00000596814 NOS2P35228 1153 aa15.33■□□□□ 0.04
VRK3-212ENST00000596814 EPHB3P54753 998 aa15.33■□□□□ 0.04
VRK3-212ENST00000596814 MLLT1Q03111 559 aaPredicted RBP15.33■□□□□ 0.04
VRK3-212ENST00000596814 CDO1Q16878 200 aa15.33■□□□□ 0.04
VRK3-212ENST00000596814 C15orf59Q2T9L4 293 aaPredicted RBP15.33■□□□□ 0.04
VRK3-212ENST00000596814 DCAF6Q58WW2 860 aa15.33■□□□□ 0.04
VRK3-212ENST00000596814 BSPRYQ5W0U4 402 aa15.33■□□□□ 0.04
VRK3-212ENST00000596814 CC2D1AQ6P1N0 951 aaPredicted RBP15.33■□□□□ 0.04
VRK3-212ENST00000596814 ARHGAP18Q8N392 663 aa15.33■□□□□ 0.04
VRK3-212ENST00000596814 CD101Q93033 1021 aa15.33■□□□□ 0.04
VRK3-212ENST00000596814 HES6Q96HZ4 224 aa15.33■□□□□ 0.04
VRK3-212ENST00000596814 TTLL2Q9BWV7 592 aa15.33■□□□□ 0.04
VRK3-212ENST00000596814 GMIPQ9P107 970 aa15.33■□□□□ 0.04
VRK3-212ENST00000596814 STAP1Q9ULZ2 295 aa15.33■□□□□ 0.04
VRK3-212ENST00000596814 MAGED2Q9UNF1 606 aaPredicted RBP15.33■□□□□ 0.04
VRK3-212ENST00000596814 A0A1W2PQH9 124 aa15.32■□□□□ 0.04
VRK3-212ENST00000596814 CLASP2O75122 1294 aaKnown RBP15.32■□□□□ 0.04
VRK3-212ENST00000596814 LRCH4O75427 683 aa15.32■□□□□ 0.04
VRK3-212ENST00000596814 C1RP00736 705 aa15.32■□□□□ 0.04
VRK3-212ENST00000596814 FYNP06241 537 aa15.32■□□□□ 0.04
VRK3-212ENST00000596814 NCAM1P13591 858 aa15.32■□□□□ 0.04
VRK3-212ENST00000596814 SSR1P43307 286 aaKnown RBP15.32■□□□□ 0.04
VRK3-212ENST00000596814 SULT1E1P49888 294 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms