RNA–Protein interactions for RNA: ENST00000594724.5

USE1-205, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 3

Gene USE1, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-205ENST00000594724 IRF1P10914 325 aa15.55■□□□□ 0.08
USE1-205ENST00000594724 VDRP11473 427 aa15.55■□□□□ 0.08
USE1-205ENST00000594724 AMPD2Q01433 879 aa15.55■□□□□ 0.08
USE1-205ENST00000594724 GRSF1Q12849 480 aaKnown RBP eCLIP15.55■□□□□ 0.08
USE1-205ENST00000594724 ZNF528Q3MIS6 628 aa15.55■□□□□ 0.08
USE1-205ENST00000594724 DPCR1Q3MIW9 517 aa15.55■□□□□ 0.08
USE1-205ENST00000594724 MAMSTRQ6ZN01 415 aa15.55■□□□□ 0.08
USE1-205ENST00000594724 SCD5Q86SK9 330 aa15.55■□□□□ 0.08
USE1-205ENST00000594724 PIGZQ86VD9 579 aa15.55■□□□□ 0.08
USE1-205ENST00000594724 DDX42Q86XP3 938 aaKnown RBP eCLIP15.55■□□□□ 0.08
USE1-205ENST00000594724 UBA3Q8TBC4 463 aa15.55■□□□□ 0.08
USE1-205ENST00000594724 P2RY13Q9BPV8 354 aa15.55■□□□□ 0.08
USE1-205ENST00000594724 INTS2Q9H0H0 1204 aaKnown RBP15.55■□□□□ 0.08
USE1-205ENST00000594724 PRMT8Q9NR22 394 aaPredicted RBP15.55■□□□□ 0.08
USE1-205ENST00000594724 NAGPAQ9UK23 515 aa15.55■□□□□ 0.08
USE1-205ENST00000594724 TSPAN16Q9UKR8 245 aa15.55■□□□□ 0.08
USE1-205ENST00000594724 USP3Q9Y6I4 520 aa15.55■□□□□ 0.08
USE1-205ENST00000594724 E2F8A0AVK6 867 aa15.54■□□□□ 0.08
USE1-205ENST00000594724 MDM4O15151 490 aa15.54■□□□□ 0.08
USE1-205ENST00000594724 RARGP13631 454 aa15.54■□□□□ 0.08
USE1-205ENST00000594724 HOXC13P31276 330 aa15.54■□□□□ 0.08
USE1-205ENST00000594724 CXCL12P48061 93 aa15.54■□□□□ 0.08
USE1-205ENST00000594724 CCR3P51677 355 aa15.54■□□□□ 0.08
USE1-205ENST00000594724 PDE4CQ08493 712 aa15.54■□□□□ 0.08
USE1-205ENST00000594724 DHCR24Q15392 516 aa15.54■□□□□ 0.08
USE1-205ENST00000594724 TPD52L1Q16890 204 aaPredicted RBP15.54■□□□□ 0.08
USE1-205ENST00000594724 PKN3Q6P5Z2 889 aa15.54■□□□□ 0.08
USE1-205ENST00000594724 CCDC186Q7Z3E2 898 aa15.54■□□□□ 0.08
USE1-205ENST00000594724 SPEM1Q8N4L4 309 aa15.54■□□□□ 0.08
USE1-205ENST00000594724 TFAP2BQ92481 460 aa15.54■□□□□ 0.08
USE1-205ENST00000594724 CD101Q93033 1021 aa15.54■□□□□ 0.08
USE1-205ENST00000594724 KREMEN1Q96MU8 473 aa15.54■□□□□ 0.08
USE1-205ENST00000594724 IPO9Q96P70 1041 aaKnown RBP15.54■□□□□ 0.08
USE1-205ENST00000594724 GBP4Q96PP9 640 aa15.54■□□□□ 0.08
USE1-205ENST00000594724 CRACR2AQ9BSW2 395 aa15.54■□□□□ 0.08
USE1-205ENST00000594724 IER2Q9BTL4 223 aa15.54■□□□□ 0.08
USE1-205ENST00000594724 KLF16Q9BXK1 252 aaPredicted RBP15.54■□□□□ 0.08
USE1-205ENST00000594724 UBXN6Q9BZV1 441 aa15.54■□□□□ 0.08
USE1-205ENST00000594724 CYLDQ9NQC7 956 aa15.54■□□□□ 0.08
USE1-205ENST00000594724 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.54■□□□□ 0.08
USE1-205ENST00000594724 HESX1Q9UBX0 185 aa15.54■□□□□ 0.08
USE1-205ENST00000594724 KIAA1257Q9ULG3 409 aa15.54■□□□□ 0.08
USE1-205ENST00000594724 SH3BP1Q9Y3L3 701 aa15.54■□□□□ 0.08
USE1-205ENST00000594724 O00370 1275 aa15.53■□□□□ 0.08
USE1-205ENST00000594724 SLC9A3R1O14745 358 aaPredicted RBP15.53■□□□□ 0.08
USE1-205ENST00000594724 CYP17A1P05093 508 aa15.53■□□□□ 0.08
USE1-205ENST00000594724 TDGF1P13385 188 aa15.53■□□□□ 0.08
USE1-205ENST00000594724 ATP5C1P36542 298 aaKnown RBP15.53■□□□□ 0.08
USE1-205ENST00000594724 OPRD1P41143 372 aa15.53■□□□□ 0.08
USE1-205ENST00000594724 BCAT1P54687 386 aa15.53■□□□□ 0.08
USE1-205ENST00000594724 SLC8A3P57103 927 aa15.53■□□□□ 0.08
USE1-205ENST00000594724 GCNT1Q02742 428 aa15.53■□□□□ 0.08
USE1-205ENST00000594724 GAB4Q2WGN9 574 aa15.53■□□□□ 0.08
USE1-205ENST00000594724 RAB41Q5JT25 222 aa15.53■□□□□ 0.08
USE1-205ENST00000594724 C10orf120Q5SQS8 335 aa15.53■□□□□ 0.08
USE1-205ENST00000594724 RHBDF2Q6PJF5 856 aa15.53■□□□□ 0.08
USE1-205ENST00000594724 ZC3H14Q6PJT7 736 aaKnown RBP15.53■□□□□ 0.08
USE1-205ENST00000594724 SYNPOQ8N3V7 929 aa15.53■□□□□ 0.08
USE1-205ENST00000594724 KIAA1958Q8N8K9 716 aa15.53■□□□□ 0.08
USE1-205ENST00000594724 GPT2Q8TD30 523 aa15.53■□□□□ 0.08
USE1-205ENST00000594724 NDRG1Q92597 394 aaKnown RBP15.53■□□□□ 0.08
USE1-205ENST00000594724 EZH1Q92800 747 aaPredicted RBP15.53■□□□□ 0.08
USE1-205ENST00000594724 ZSWIM1Q9BR11 485 aa15.53■□□□□ 0.08
USE1-205ENST00000594724 ZSCAN32Q9NX65 697 aa15.53■□□□□ 0.08
USE1-205ENST00000594724 TBC1D14Q9P2M4 693 aa15.53■□□□□ 0.08
USE1-205ENST00000594724 VPS13AQ96RL7 3174 aa15.52■□□□□ 0.08
USE1-205ENST00000594724 MYO15AQ9UKN7 3530 aa15.52■□□□□ 0.08
USE1-205ENST00000594724 XPO1O14980 1071 aaKnown RBP15.52■□□□□ 0.08
USE1-205ENST00000594724 PAEPP09466 180 aa15.52■□□□□ 0.08
USE1-205ENST00000594724 SLC9A1P19634 815 aa15.52■□□□□ 0.08
USE1-205ENST00000594724 DRD1P21728 446 aa15.52■□□□□ 0.08
USE1-205ENST00000594724 BRD2P25440 801 aaKnown RBP15.52■□□□□ 0.08
USE1-205ENST00000594724 MTIF2P46199 727 aaKnown RBP15.52■□□□□ 0.08
USE1-205ENST00000594724 SLC6A11P48066 632 aa15.52■□□□□ 0.08
USE1-205ENST00000594724 TKTL1P51854 596 aa15.52■□□□□ 0.08
USE1-205ENST00000594724 APBA1Q02410 837 aa15.52■□□□□ 0.08
USE1-205ENST00000594724 BST2Q10589 180 aaKnown RBP15.52■□□□□ 0.08
USE1-205ENST00000594724 HSP90AA4PQ58FG1 418 aa15.52■□□□□ 0.08
USE1-205ENST00000594724 GJB7Q6PEY0 223 aa15.52■□□□□ 0.08
USE1-205ENST00000594724 BBS7Q8IWZ6 715 aa15.52■□□□□ 0.08
USE1-205ENST00000594724 RBBP8NLQ8NC74 664 aaPredicted RBP15.52■□□□□ 0.08
USE1-205ENST00000594724 ZBTB44Q8NCP5 570 aa15.52■□□□□ 0.08
USE1-205ENST00000594724 ATRIPQ8WXE1 791 aa15.52■□□□□ 0.08
USE1-205ENST00000594724 NELL1Q92832 810 aa15.52■□□□□ 0.08
USE1-205ENST00000594724 ULBP1Q9BZM6 244 aa15.52■□□□□ 0.08
USE1-205ENST00000594724 UBE2TQ9NPD8 197 aaPredicted RBP15.52■□□□□ 0.08
USE1-205ENST00000594724 POLR3BQ9NW08 1133 aaPredicted RBP15.52■□□□□ 0.08
USE1-205ENST00000594724 DNMT3LQ9UJW3 386 aa15.52■□□□□ 0.08
USE1-205ENST00000594724 USP34Q70CQ2 3546 aa15.51■□□□□ 0.07
USE1-205ENST00000594724 MYO16Q9Y6X6 1858 aa15.51■□□□□ 0.07
USE1-205ENST00000594724 ANTXRLA6NF34 631 aa15.51■□□□□ 0.07
USE1-205ENST00000594724 GREM1O60565 184 aa15.51■□□□□ 0.07
USE1-205ENST00000594724 RNF40O75150 1001 aa15.51■□□□□ 0.07
USE1-205ENST00000594724 LMNAP02545 664 aaKnown RBP15.51■□□□□ 0.07
USE1-205ENST00000594724 RALAP11233 206 aa15.51■□□□□ 0.07
USE1-205ENST00000594724 PSEN1P49768 467 aa15.51■□□□□ 0.07
USE1-205ENST00000594724 DMWDQ09019 674 aa15.51■□□□□ 0.07
USE1-205ENST00000594724 PPP2R5DQ14738 602 aa15.51■□□□□ 0.07
USE1-205ENST00000594724 CNGA2Q16280 664 aa15.51■□□□□ 0.07
USE1-205ENST00000594724 PKDCCQ504Y2 493 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms