RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 TYROBPO43914 113 aa17.27■□□□□ 0.35
PRKCSH-217ENST00000592741 ZWINTO95229 277 aa17.27■□□□□ 0.35
PRKCSH-217ENST00000592741 SMIM10L2AP0DMW4 78 aa17.27■□□□□ 0.35
PRKCSH-217ENST00000592741 SMIM10L2BP0DMW5 78 aa17.27■□□□□ 0.35
PRKCSH-217ENST00000592741 NRLP54845 237 aa17.27■□□□□ 0.35
PRKCSH-217ENST00000592741 PDK4Q16654 411 aa17.27■□□□□ 0.35
PRKCSH-217ENST00000592741 ZC3H12AQ5D1E8 599 aaKnown RBP17.27■□□□□ 0.35
PRKCSH-217ENST00000592741 GLRA4Q5JXX5 417 aa17.27■□□□□ 0.35
PRKCSH-217ENST00000592741 HHATQ5VTY9 493 aa17.27■□□□□ 0.35
PRKCSH-217ENST00000592741 C9orf57Q5W0N0 161 aa17.27■□□□□ 0.35
PRKCSH-217ENST00000592741 RNF43Q68DV7 783 aa17.27■□□□□ 0.35
PRKCSH-217ENST00000592741 SCUBE3Q8IX30 993 aa17.27■□□□□ 0.35
PRKCSH-217ENST00000592741 CCDC63Q8NA47 563 aa17.27■□□□□ 0.35
PRKCSH-217ENST00000592741 PARK7Q99497 189 aaKnown RBP17.27■□□□□ 0.35
PRKCSH-217ENST00000592741 SYT17Q9BSW7 474 aa17.27■□□□□ 0.35
PRKCSH-217ENST00000592741 SNRNP25Q9BV90 132 aaKnown RBP17.27■□□□□ 0.35
PRKCSH-217ENST00000592741 UBQLN1Q9UMX0 589 aaKnown RBP17.27■□□□□ 0.35
PRKCSH-217ENST00000592741 CLEC11AQ9Y240 323 aa17.27■□□□□ 0.35
PRKCSH-217ENST00000592741 NME7Q9Y5B8 376 aa17.27■□□□□ 0.35
PRKCSH-217ENST00000592741 SMIM35A0A1B0GVV1 85 aa17.26■□□□□ 0.35
PRKCSH-217ENST00000592741 CFAP73A6NFT4 308 aa17.26■□□□□ 0.35
PRKCSH-217ENST00000592741 GLTPD2A6NH11 291 aa17.26■□□□□ 0.35
PRKCSH-217ENST00000592741 A8MXQ7 604 aa17.26■□□□□ 0.35
PRKCSH-217ENST00000592741 KCNN4O15554 427 aa17.26■□□□□ 0.35
PRKCSH-217ENST00000592741 RECQL4O94761 1208 aa17.26■□□□□ 0.35
PRKCSH-217ENST00000592741 IL4RP24394 825 aa17.26■□□□□ 0.35
PRKCSH-217ENST00000592741 ELK3P41970 407 aa17.26■□□□□ 0.35
PRKCSH-217ENST00000592741 SLC9A4Q6AI14 798 aa17.26■□□□□ 0.35
PRKCSH-217ENST00000592741 FAM47EQ6ZV65 393 aa17.26■□□□□ 0.35
PRKCSH-217ENST00000592741 PQLC3Q8N755 202 aa17.26■□□□□ 0.35
PRKCSH-217ENST00000592741 LRRC8CQ8TDW0 803 aa17.26■□□□□ 0.35
PRKCSH-217ENST00000592741 RTP4Q96DX8 246 aa17.26■□□□□ 0.35
PRKCSH-217ENST00000592741 CYTH2Q99418 400 aa17.26■□□□□ 0.35
PRKCSH-217ENST00000592741 ZNF670Q9BS34 389 aa17.26■□□□□ 0.35
PRKCSH-217ENST00000592741 RXFP1Q9HBX9 757 aa17.26■□□□□ 0.35
PRKCSH-217ENST00000592741 GGT7Q9UJ14 662 aa17.26■□□□□ 0.35
PRKCSH-217ENST00000592741 STARD13Q9Y3M8 1113 aa17.26■□□□□ 0.35
PRKCSH-217ENST00000592741 HES2Q9Y543 173 aa17.26■□□□□ 0.35
PRKCSH-217ENST00000592741 SCN4AP35499 1836 aa17.26■□□□□ 0.35
PRKCSH-217ENST00000592741 SPAG6O75602 509 aa17.26■□□□□ 0.35
PRKCSH-217ENST00000592741 ZBED1O96006 694 aa17.26■□□□□ 0.35
PRKCSH-217ENST00000592741 CYP2C9P11712 490 aa17.26■□□□□ 0.35
PRKCSH-217ENST00000592741 DARSP14868 501 aaKnown RBP17.26■□□□□ 0.35
PRKCSH-217ENST00000592741 KRT4P19013 534 aa17.26■□□□□ 0.35
PRKCSH-217ENST00000592741 MTM1Q13496 603 aa17.26■□□□□ 0.35
PRKCSH-217ENST00000592741 FAM110CQ1W6H9 321 aa17.26■□□□□ 0.35
PRKCSH-217ENST00000592741 SOWAHAQ2M3V2 549 aa17.26■□□□□ 0.35
PRKCSH-217ENST00000592741 GALNTL6Q49A17 601 aa17.26■□□□□ 0.35
PRKCSH-217ENST00000592741 ICE2Q659A1 982 aa17.26■□□□□ 0.35
PRKCSH-217ENST00000592741 ALKAL1Q6UXT8 129 aa17.26■□□□□ 0.35
PRKCSH-217ENST00000592741 PNMA8AQ86V59 439 aaPredicted RBP17.26■□□□□ 0.35
PRKCSH-217ENST00000592741 PARP9Q8IXQ6 854 aa17.26■□□□□ 0.35
PRKCSH-217ENST00000592741 NPLOC4Q8TAT6 608 aa17.26■□□□□ 0.35
PRKCSH-217ENST00000592741 DCAKDQ8WVC6 231 aa17.26■□□□□ 0.35
PRKCSH-217ENST00000592741 KHSRPQ92945 711 aaKnown RBP eCLIP17.26■□□□□ 0.35
PRKCSH-217ENST00000592741 FRMD8Q9BZ67 464 aaPredicted RBP17.26■□□□□ 0.35
PRKCSH-217ENST00000592741 DNAI2Q9GZS0 605 aa17.26■□□□□ 0.35
PRKCSH-217ENST00000592741 DPEP3Q9H4B8 488 aa17.26■□□□□ 0.35
PRKCSH-217ENST00000592741 NXF3Q9H4D5 531 aaKnown RBP17.26■□□□□ 0.35
PRKCSH-217ENST00000592741 CDHR5Q9HBB8 845 aa17.26■□□□□ 0.35
PRKCSH-217ENST00000592741 USP29Q9HBJ7 922 aa17.26■□□□□ 0.35
PRKCSH-217ENST00000592741 SLC5A4Q9NY91 659 aa17.26■□□□□ 0.35
PRKCSH-217ENST00000592741 HEY1Q9Y5J3 304 aa17.26■□□□□ 0.35
PRKCSH-217ENST00000592741 ZNF487B1APH4 448 aa17.25■□□□□ 0.35
PRKCSH-217ENST00000592741 DYNC1LI2O43237 492 aaPredicted RBP17.25■□□□□ 0.35
PRKCSH-217ENST00000592741 ADCY6O43306 1168 aa17.25■□□□□ 0.35
PRKCSH-217ENST00000592741 CD4P01730 458 aa17.25■□□□□ 0.35
PRKCSH-217ENST00000592741 AXLP30530 894 aa17.25■□□□□ 0.35
PRKCSH-217ENST00000592741 PTPN9P43378 593 aa17.25■□□□□ 0.35
PRKCSH-217ENST00000592741 MNAT1P51948 309 aa17.25■□□□□ 0.35
PRKCSH-217ENST00000592741 BCAT1P54687 386 aa17.25■□□□□ 0.35
PRKCSH-217ENST00000592741 BST2Q10589 180 aaKnown RBP17.25■□□□□ 0.35
PRKCSH-217ENST00000592741 DNAJC3Q13217 504 aa17.25■□□□□ 0.35
PRKCSH-217ENST00000592741 SLC1A5Q15758 541 aa17.25■□□□□ 0.35
PRKCSH-217ENST00000592741 SEPT7Q16181 437 aaKnown RBP17.25■□□□□ 0.35
PRKCSH-217ENST00000592741 C7orf31Q8N865 590 aa17.25■□□□□ 0.35
PRKCSH-217ENST00000592741 PCDH19Q8TAB3 1148 aa17.25■□□□□ 0.35
PRKCSH-217ENST00000592741 ALKBH8Q96BT7 664 aaKnown RBP17.25■□□□□ 0.35
PRKCSH-217ENST00000592741 ZNF560Q96MR9 790 aa17.25■□□□□ 0.35
PRKCSH-217ENST00000592741 APOL6Q9BWW8 343 aa17.25■□□□□ 0.35
PRKCSH-217ENST00000592741 ADAM33Q9BZ11 813 aa17.25■□□□□ 0.35
PRKCSH-217ENST00000592741 RAB6BQ9NRW1 208 aa17.25■□□□□ 0.35
PRKCSH-217ENST00000592741 BCLAF3A2AJT9 711 aaKnown RBP17.24■□□□□ 0.35
PRKCSH-217ENST00000592741 F2P00734 622 aa17.24■□□□□ 0.35
PRKCSH-217ENST00000592741 HDAC4P56524 1084 aa17.24■□□□□ 0.35
PRKCSH-217ENST00000592741 SNCBQ16143 134 aa17.24■□□□□ 0.35
PRKCSH-217ENST00000592741 CA9Q16790 459 aa17.24■□□□□ 0.35
PRKCSH-217ENST00000592741 FBXO47Q5MNV8 452 aa17.24■□□□□ 0.35
PRKCSH-217ENST00000592741 CDKL3Q8IVW4 592 aaPredicted RBP17.24■□□□□ 0.35
PRKCSH-217ENST00000592741 B3GNT5Q9BYG0 378 aa17.24■□□□□ 0.35
PRKCSH-217ENST00000592741 KLC2Q9H0B6 622 aa17.24■□□□□ 0.35
PRKCSH-217ENST00000592741 ECT2Q9H8V3 914 aa17.24■□□□□ 0.35
PRKCSH-217ENST00000592741 GRID1Q9ULK0 1009 aa17.24■□□□□ 0.35
PRKCSH-217ENST00000592741 PHTF1Q9UMS5 762 aa17.24■□□□□ 0.35
PRKCSH-217ENST00000592741 TEX264Q9Y6I9 313 aa17.24■□□□□ 0.35
PRKCSH-217ENST00000592741 MBLAC1A4D2B0 266 aaPredicted RBP17.24■□□□□ 0.35
PRKCSH-217ENST00000592741 SLC15A5A6NIM6 579 aa17.24■□□□□ 0.35
PRKCSH-217ENST00000592741 A6NJR5 290 aa17.24■□□□□ 0.35
PRKCSH-217ENST00000592741 KBTBD13C9JR72 458 aa17.24■□□□□ 0.35
PRKCSH-217ENST00000592741 XPOTO43592 962 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms