RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 ETV4P43268 484 aa15.75■□□□□ 0.11
CIRBP-228ENST00000590347 CSE1LP55060 971 aaKnown RBP15.75■□□□□ 0.11
CIRBP-228ENST00000590347 BFSP1Q12934 665 aa15.75■□□□□ 0.11
CIRBP-228ENST00000590347 EFHC2Q5JST6 749 aa15.75■□□□□ 0.11
CIRBP-228ENST00000590347 TXNRD3NBQ6F5E7 133 aa15.75■□□□□ 0.11
CIRBP-228ENST00000590347 DCDC5Q6ZRR9 648 aa15.75■□□□□ 0.11
CIRBP-228ENST00000590347 NUDCD3Q8IVD9 361 aa15.75■□□□□ 0.11
CIRBP-228ENST00000590347 LILRA2Q8N149 483 aa15.75■□□□□ 0.11
CIRBP-228ENST00000590347 MARVELD2Q8N4S9 558 aa15.75■□□□□ 0.11
CIRBP-228ENST00000590347 SPATA17Q96L03 361 aa15.75■□□□□ 0.11
CIRBP-228ENST00000590347 TSPAN18Q96SJ8 248 aa15.75■□□□□ 0.11
CIRBP-228ENST00000590347 CBWD1Q9BRT8 395 aa15.75■□□□□ 0.11
CIRBP-228ENST00000590347 RTFDC1Q9BY42 306 aaPredicted RBP15.75■□□□□ 0.11
CIRBP-228ENST00000590347 WWP1Q9H0M0 922 aa15.75■□□□□ 0.11
CIRBP-228ENST00000590347 GTF3C4Q9UKN8 822 aa15.75■□□□□ 0.11
CIRBP-228ENST00000590347 A0A1W2PPW3 197 aa15.75■□□□□ 0.11
CIRBP-228ENST00000590347 COPAP53621 1224 aa15.75■□□□□ 0.11
CIRBP-228ENST00000590347 NR1H2P55055 460 aa15.75■□□□□ 0.11
CIRBP-228ENST00000590347 MRPS9P82933 396 aaKnown RBP15.75■□□□□ 0.11
CIRBP-228ENST00000590347 TCP10Q12799 353 aa15.75■□□□□ 0.11
CIRBP-228ENST00000590347 POMGNT1Q8WZA1 660 aa15.75■□□□□ 0.11
CIRBP-228ENST00000590347 TPK1Q9H3S4 243 aa15.75■□□□□ 0.11
CIRBP-228ENST00000590347 STRIP2Q9ULQ0 834 aa15.75■□□□□ 0.11
CIRBP-228ENST00000590347 BTBD19C9JJ37 291 aa15.74■□□□□ 0.11
CIRBP-228ENST00000590347 STX16-NPEPL1H3BU86 382 aa15.74■□□□□ 0.11
CIRBP-228ENST00000590347 EML1O00423 815 aa15.74■□□□□ 0.11
CIRBP-228ENST00000590347 PLOD2O00469 737 aa15.74■□□□□ 0.11
CIRBP-228ENST00000590347 PPEF1O14829 653 aaPredicted RBP15.74■□□□□ 0.11
CIRBP-228ENST00000590347 SLC16A3O15427 465 aaKnown RBP15.74■□□□□ 0.11
CIRBP-228ENST00000590347 DCXO43602 365 aa15.74■□□□□ 0.11
CIRBP-228ENST00000590347 CYP11B1P15538 503 aa15.74■□□□□ 0.11
CIRBP-228ENST00000590347 NKX2-5P52952 324 aaPredicted RBP15.74■□□□□ 0.11
CIRBP-228ENST00000590347 ITGADQ13349 1161 aa15.74■□□□□ 0.11
CIRBP-228ENST00000590347 PDAP1Q13442 181 aaKnown RBP15.74■□□□□ 0.11
CIRBP-228ENST00000590347 MFSD7Q6UXD7 560 aa15.74■□□□□ 0.11
CIRBP-228ENST00000590347 TDRPQ86YL5 185 aa15.74■□□□□ 0.11
CIRBP-228ENST00000590347 MYO1HQ8N1T3 1032 aa15.74■□□□□ 0.11
CIRBP-228ENST00000590347 MOCOSQ96EN8 888 aa15.74■□□□□ 0.11
CIRBP-228ENST00000590347 ZFRQ96KR1 1074 aaKnown RBP15.74■□□□□ 0.11
CIRBP-228ENST00000590347 ZC3H12CQ9C0D7 883 aaKnown RBP15.74■□□□□ 0.11
CIRBP-228ENST00000590347 NAA50Q9GZZ1 169 aaKnown RBP15.74■□□□□ 0.11
CIRBP-228ENST00000590347 TBC1D23Q9NUY8 699 aa15.74■□□□□ 0.11
CIRBP-228ENST00000590347 FZD1Q9UP38 647 aa15.74■□□□□ 0.11
CIRBP-228ENST00000590347 TMED5Q9Y3A6 229 aa15.74■□□□□ 0.11
CIRBP-228ENST00000590347 SF3B1O75533 1304 aaKnown RBP eCLIP15.74■□□□□ 0.116e-7■■■■□ 24.7
CIRBP-228ENST00000590347 ZBED1O96006 694 aa15.74■□□□□ 0.11
CIRBP-228ENST00000590347 CYP1A2P05177 515 aa15.74■□□□□ 0.11
CIRBP-228ENST00000590347 INHBAP08476 426 aa15.74■□□□□ 0.11
CIRBP-228ENST00000590347 CD48P09326 243 aa15.74■□□□□ 0.11
CIRBP-228ENST00000590347 CDH3P22223 829 aa15.74■□□□□ 0.11
CIRBP-228ENST00000590347 EPHA3P29320 983 aa15.74■□□□□ 0.11
CIRBP-228ENST00000590347 UBXN2AP68543 259 aa15.74■□□□□ 0.11
CIRBP-228ENST00000590347 ODR4Q5SWX8 454 aa15.74■□□□□ 0.11
CIRBP-228ENST00000590347 MZB1Q8WU39 189 aa15.74■□□□□ 0.11
CIRBP-228ENST00000590347 SEMA4DQ92854 862 aa15.74■□□□□ 0.11
CIRBP-228ENST00000590347 NT5C1BQ96P26 610 aa15.74■□□□□ 0.11
CIRBP-228ENST00000590347 ARPC5LQ9BPX5 153 aa15.74■□□□□ 0.11
CIRBP-228ENST00000590347 KIAA1522Q9P206 1035 aaPredicted RBP15.74■□□□□ 0.11
CIRBP-228ENST00000590347 DNAJC16Q9Y2G8 782 aa15.74■□□□□ 0.11
CIRBP-228ENST00000590347 FADS3Q9Y5Q0 445 aa15.74■□□□□ 0.11
CIRBP-228ENST00000590347 GTPBP10A4D1E9 387 aaKnown RBP15.74■□□□□ 0.11
CIRBP-228ENST00000590347 PSMD12O00232 456 aaPredicted RBP15.74■□□□□ 0.11
CIRBP-228ENST00000590347 ATP2A1O14983 1001 aa15.74■□□□□ 0.11
CIRBP-228ENST00000590347 ALOX15BO15296 676 aa15.74■□□□□ 0.11
CIRBP-228ENST00000590347 UGT1A6P19224 532 aa15.74■□□□□ 0.11
CIRBP-228ENST00000590347 UGT1A1P22309 533 aa15.74■□□□□ 0.11
CIRBP-228ENST00000590347 UGT1A4P22310 534 aa15.74■□□□□ 0.11
CIRBP-228ENST00000590347 UGT1A3P35503 534 aa15.74■□□□□ 0.11
CIRBP-228ENST00000590347 UGT1A5P35504 534 aa15.74■□□□□ 0.11
CIRBP-228ENST00000590347 PHKA2P46019 1235 aa15.74■□□□□ 0.11
CIRBP-228ENST00000590347 CDK8P49336 464 aa15.74■□□□□ 0.11
CIRBP-228ENST00000590347 C21orf59P57076 290 aa15.74■□□□□ 0.11
CIRBP-228ENST00000590347 BASP1P80723 227 aaKnown RBP15.74■□□□□ 0.11
CIRBP-228ENST00000590347 CRY2Q49AN0 593 aa15.74■□□□□ 0.11
CIRBP-228ENST00000590347 CRLF3Q8IUI8 442 aa15.74■□□□□ 0.11
CIRBP-228ENST00000590347 ERI1Q8IV48 349 aaKnown RBP15.74■□□□□ 0.11
CIRBP-228ENST00000590347 FAM178BQ8IXR5 827 aa15.74■□□□□ 0.11
CIRBP-228ENST00000590347 TRIM11Q96F44 468 aa15.74■□□□□ 0.11
CIRBP-228ENST00000590347 PKP2Q99959 881 aa15.74■□□□□ 0.11
CIRBP-228ENST00000590347 RABGAP1Q9Y3P9 1069 aa15.74■□□□□ 0.11
CIRBP-228ENST00000590347 GPC6Q9Y625 555 aaPredicted RBP15.74■□□□□ 0.11
CIRBP-228ENST00000590347 TM9SF1O15321 606 aa15.73■□□□□ 0.11
CIRBP-228ENST00000590347 CBFA2T3O75081 653 aa15.73■□□□□ 0.11
CIRBP-228ENST00000590347 ITGAXP20702 1163 aa15.73■□□□□ 0.11
CIRBP-228ENST00000590347 HADHBP55084 474 aaKnown RBP15.73■□□□□ 0.11
CIRBP-228ENST00000590347 EIF3EP60228 445 aaKnown RBP15.73■□□□□ 0.11
CIRBP-228ENST00000590347 KLF1Q13351 362 aaPredicted RBP15.73■□□□□ 0.11
CIRBP-228ENST00000590347 PERM1Q5SV97 790 aa15.73■□□□□ 0.11
CIRBP-228ENST00000590347 AAGABQ6PD74 315 aa15.73■□□□□ 0.11
CIRBP-228ENST00000590347 FOXR2Q6PJQ5 311 aa15.73■□□□□ 0.11
CIRBP-228ENST00000590347 PRR23BQ6ZRT6 265 aa15.73■□□□□ 0.11
CIRBP-228ENST00000590347 OGFOD1Q8N543 542 aa15.73■□□□□ 0.11
CIRBP-228ENST00000590347 KCNK4Q9NYG8 393 aa15.73■□□□□ 0.11
CIRBP-228ENST00000590347 SLC24A2Q9UI40 661 aa15.73■□□□□ 0.11
CIRBP-228ENST00000590347 CORINQ9Y5Q5 1042 aa15.73■□□□□ 0.11
CIRBP-228ENST00000590347 MATN2O00339 956 aa15.73■□□□□ 0.11
CIRBP-228ENST00000590347 KLHL41O60662 606 aa15.73■□□□□ 0.11
CIRBP-228ENST00000590347 ATE1O95260 518 aa15.73■□□□□ 0.11
CIRBP-228ENST00000590347 KCNA4P22459 653 aa15.73■□□□□ 0.11
CIRBP-228ENST00000590347 ATP2B4P23634 1241 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms