RNA–Protein interactions for RNA: ENST00000590096.1

ATG4D-212, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 1,282 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-212ENST00000590096 STK32AQ8WU08 396 aa22.39■■□□□ 1.17
ATG4D-212ENST00000590096 NOX5Q96PH1 765 aa22.39■■□□□ 1.17
ATG4D-212ENST00000590096 RNF38Q9H0F5 515 aa22.39■■□□□ 1.17
ATG4D-212ENST00000590096 LHX5Q9H2C1 402 aa22.39■■□□□ 1.17
ATG4D-212ENST00000590096 EPHX3Q9H6B9 360 aa22.39■■□□□ 1.17
ATG4D-212ENST00000590096 BRD9Q9H8M2 597 aa22.39■■□□□ 1.17
ATG4D-212ENST00000590096 NMUR1Q9HB89 426 aa22.39■■□□□ 1.17
ATG4D-212ENST00000590096 SLC2A4RGQ9NR83 387 aa22.39■■□□□ 1.17
ATG4D-212ENST00000590096 THG1LQ9NWX6 298 aaKnown RBP22.39■■□□□ 1.17
ATG4D-212ENST00000590096 FBXL21Q9UKT6 434 aa22.39■■□□□ 1.17
ATG4D-212ENST00000590096 ARHGAP26Q9UNA1 814 aa22.39■■□□□ 1.17
ATG4D-212ENST00000590096 HELZP42694 1942 aaKnown RBP22.39■■□□□ 1.17
ATG4D-212ENST00000590096 PIK3R2O00459 728 aa22.38■■□□□ 1.17
ATG4D-212ENST00000590096 ZNF263O14978 683 aa22.38■■□□□ 1.17
ATG4D-212ENST00000590096 COCHO43405 550 aa22.38■■□□□ 1.17
ATG4D-212ENST00000590096 CBFA2T2O43439 604 aa22.38■■□□□ 1.17
ATG4D-212ENST00000590096 FBXO21O94952 628 aa22.38■■□□□ 1.17
ATG4D-212ENST00000590096 OLFM2O95897 454 aa22.38■■□□□ 1.17
ATG4D-212ENST00000590096 RARGP13631 454 aa22.38■■□□□ 1.17
ATG4D-212ENST00000590096 GDI1P31150 447 aa22.38■■□□□ 1.17
ATG4D-212ENST00000590096 PGFP49763 221 aa22.38■■□□□ 1.17
ATG4D-212ENST00000590096 YWHAGP61981 247 aaKnown RBP eCLIP22.38■■□□□ 1.17
ATG4D-212ENST00000590096 PFKPQ01813 784 aa22.38■■□□□ 1.17
ATG4D-212ENST00000590096 ZNF677Q86XU0 584 aa22.38■■□□□ 1.17
ATG4D-212ENST00000590096 FMNL3Q8IVF7 1028 aa22.38■■□□□ 1.17
ATG4D-212ENST00000590096 SCML4Q8N228 414 aa22.38■■□□□ 1.17
ATG4D-212ENST00000590096 EPS8L1Q8TE68 723 aa22.38■■□□□ 1.17
ATG4D-212ENST00000590096 CDK5RAP1Q96SZ6 601 aaKnown RBP22.38■■□□□ 1.17
ATG4D-212ENST00000590096 CYLDQ9NQC7 956 aa22.38■■□□□ 1.17
ATG4D-212ENST00000590096 CLIC5Q9NZA1 410 aa22.38■■□□□ 1.17
ATG4D-212ENST00000590096 RAPGEFL1Q9UHV5 662 aa22.38■■□□□ 1.17
ATG4D-212ENST00000590096 CPQQ9Y646 472 aa22.38■■□□□ 1.17
ATG4D-212ENST00000590096 CCDC172P0C7W6 258 aa22.37■■□□□ 1.17
ATG4D-212ENST00000590096 FCHO2Q0JRZ9 810 aa22.37■■□□□ 1.17
ATG4D-212ENST00000590096 ARHGAP29Q52LW3 1261 aa22.37■■□□□ 1.17
ATG4D-212ENST00000590096 CC2D1AQ6P1N0 951 aaPredicted RBP22.37■■□□□ 1.17
ATG4D-212ENST00000590096 TRIM67Q6ZTA4 783 aa22.37■■□□□ 1.17
ATG4D-212ENST00000590096 SCD5Q86SK9 330 aa22.37■■□□□ 1.17
ATG4D-212ENST00000590096 NOP9Q86U38 636 aaKnown RBP22.37■■□□□ 1.17
ATG4D-212ENST00000590096 SH3RF2Q8TEC5 729 aa22.37■■□□□ 1.17
ATG4D-212ENST00000590096 IRF7Q92985 503 aa22.37■■□□□ 1.17
ATG4D-212ENST00000590096 NUP58Q9BVL2 599 aa22.37■■□□□ 1.17
ATG4D-212ENST00000590096 MTPAPQ9NVV4 582 aaKnown RBP eCLIP22.37■■□□□ 1.17
ATG4D-212ENST00000590096 OSER1Q9NX31 292 aa22.37■■□□□ 1.17
ATG4D-212ENST00000590096 MYO6Q9UM54 1294 aa22.37■■□□□ 1.17
ATG4D-212ENST00000590096 CHADO15335 359 aa22.36■■□□□ 1.17
ATG4D-212ENST00000590096 TCF3P15923 654 aa22.36■■□□□ 1.17
ATG4D-212ENST00000590096 ATP5C1P36542 298 aaKnown RBP22.36■■□□□ 1.17
ATG4D-212ENST00000590096 RPL34P49207 117 aaKnown RBP22.36■■□□□ 1.17
ATG4D-212ENST00000590096 SNX16P57768 344 aa22.36■■□□□ 1.17
ATG4D-212ENST00000590096 DAOAP59103 153 aa22.36■■□□□ 1.17
ATG4D-212ENST00000590096 PLCB2Q00722 1185 aa22.36■■□□□ 1.17
ATG4D-212ENST00000590096 ARID5AQ03989 594 aa22.36■■□□□ 1.17
ATG4D-212ENST00000590096 USP4Q13107 963 aa22.36■■□□□ 1.17
ATG4D-212ENST00000590096 PDCLQ13371 301 aa22.36■■□□□ 1.17
ATG4D-212ENST00000590096 C10orf120Q5SQS8 335 aa22.36■■□□□ 1.17
ATG4D-212ENST00000590096 BTBD8Q5XKL5 378 aa22.36■■□□□ 1.17
ATG4D-212ENST00000590096 DDX42Q86XP3 938 aaKnown RBP eCLIP22.36■■□□□ 1.17
ATG4D-212ENST00000590096 TMEM35BQ8NCS4 154 aa22.36■■□□□ 1.17
ATG4D-212ENST00000590096 C1orf131Q8NDD1 294 aaKnown RBP22.36■■□□□ 1.17
ATG4D-212ENST00000590096 IRGQQ8WZA9 623 aa22.36■■□□□ 1.17
ATG4D-212ENST00000590096 NDRG1Q92597 394 aaKnown RBP22.36■■□□□ 1.17
ATG4D-212ENST00000590096 GOLGA1Q92805 767 aa22.36■■□□□ 1.17
ATG4D-212ENST00000590096 LRRC3BQ96PB8 259 aa22.36■■□□□ 1.17
ATG4D-212ENST00000590096 SLC4A5Q9BY07 1137 aa22.36■■□□□ 1.17
ATG4D-212ENST00000590096 XPO4Q9C0E2 1151 aaKnown RBP22.36■■□□□ 1.17
ATG4D-212ENST00000590096 MIS12Q9H081 205 aa22.36■■□□□ 1.17
ATG4D-212ENST00000590096 SMPD4Q9NXE4 827 aa22.36■■□□□ 1.17
ATG4D-212ENST00000590096 WNT16Q9UBV4 365 aa22.36■■□□□ 1.17
ATG4D-212ENST00000590096 CYTH4Q9UIA0 394 aa22.36■■□□□ 1.17
ATG4D-212ENST00000590096 LEFTY2O00292 366 aa22.35■■□□□ 1.17
ATG4D-212ENST00000590096 SART1O43290 800 aaKnown RBP22.35■■□□□ 1.17
ATG4D-212ENST00000590096 FERP16591 822 aa22.35■■□□□ 1.17
ATG4D-212ENST00000590096 PBX1P40424 430 aa22.35■■□□□ 1.17
ATG4D-212ENST00000590096 MTF1Q14872 753 aa22.35■■□□□ 1.17
ATG4D-212ENST00000590096 ZNF77Q15935 545 aa22.35■■□□□ 1.17
ATG4D-212ENST00000590096 KLHDC10Q6PID8 442 aa22.35■■□□□ 1.17
ATG4D-212ENST00000590096 RSRC2Q7L4I2 434 aaKnown RBP22.35■■□□□ 1.17
ATG4D-212ENST00000590096 ZNF276Q8N554 614 aa22.35■■□□□ 1.17
ATG4D-212ENST00000590096 DDX1Q92499 740 aaKnown RBP22.35■■□□□ 1.17
ATG4D-212ENST00000590096 DNASE1L2Q92874 299 aa22.35■■□□□ 1.17
ATG4D-212ENST00000590096 PPP1R13BQ96KQ4 1090 aa22.35■■□□□ 1.17
ATG4D-212ENST00000590096 ANP32EQ9BTT0 268 aa22.35■■□□□ 1.17
ATG4D-212ENST00000590096 EDEM3Q9BZQ6 932 aa22.35■■□□□ 1.17
ATG4D-212ENST00000590096 DNMT3LQ9UJW3 386 aa22.35■■□□□ 1.17
ATG4D-212ENST00000590096 YJEFN3A6XGL0 299 aa22.34■■□□□ 1.17
ATG4D-212ENST00000590096 E5RJQ4 531 aa22.34■■□□□ 1.17
ATG4D-212ENST00000590096 E7ENQ6 273 aa22.34■■□□□ 1.17
ATG4D-212ENST00000590096 GABBR2O75899 941 aa22.34■■□□□ 1.17
ATG4D-212ENST00000590096 LSM8O95777 96 aaKnown RBP22.34■■□□□ 1.17
ATG4D-212ENST00000590096 TBX18O95935 607 aa22.34■■□□□ 1.17
ATG4D-212ENST00000590096 MMEP08473 750 aa22.34■■□□□ 1.17
ATG4D-212ENST00000590096 GOLGA8FQ08AF8 430 aa22.34■■□□□ 1.17
ATG4D-212ENST00000590096 GOLGA8DPQ0D2H9 430 aa22.34■■□□□ 1.17
ATG4D-212ENST00000590096 FIGNQ5HY92 759 aa22.34■■□□□ 1.17
ATG4D-212ENST00000590096 BHLHA9Q7RTU4 235 aa22.34■■□□□ 1.17
ATG4D-212ENST00000590096 TMEM110Q86TL2 294 aa22.34■■□□□ 1.17
ATG4D-212ENST00000590096 SCUBE3Q8IX30 993 aa22.34■■□□□ 1.17
ATG4D-212ENST00000590096 WDTC1Q8N5D0 677 aa22.34■■□□□ 1.17
ATG4D-212ENST00000590096 CSGALNACT1Q8TDX6 532 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms