RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 ATL2Q8NHH9 583 aa9.17□□□□□ -0.94
SMAD4-206ENST00000588860 FBXO25Q8TCJ0 367 aa9.17□□□□□ -0.94
SMAD4-206ENST00000588860 HASPINQ8TF76 798 aa9.17□□□□□ -0.94
SMAD4-206ENST00000588860 FAM172AQ8WUF8 416 aa9.17□□□□□ -0.94
SMAD4-206ENST00000588860 RIN2Q8WYP3 895 aaPredicted RBP9.17□□□□□ -0.94
SMAD4-206ENST00000588860 PIK3R5Q8WYR1 880 aa9.17□□□□□ -0.94
SMAD4-206ENST00000588860 HAUS1Q96CS2 278 aa9.17□□□□□ -0.94
SMAD4-206ENST00000588860 SNF8Q96H20 258 aa9.17□□□□□ -0.94
SMAD4-206ENST00000588860 HSFY1Q96LI6 401 aa9.17□□□□□ -0.94
SMAD4-206ENST00000588860 UROC1Q96N76 676 aa9.17□□□□□ -0.94
SMAD4-206ENST00000588860 DUSP16Q9BY84 665 aa9.17□□□□□ -0.94
SMAD4-206ENST00000588860 RAB6CQ9H0N0 254 aa9.17□□□□□ -0.94
SMAD4-206ENST00000588860 UNC93B1Q9H1C4 597 aa9.17□□□□□ -0.94
SMAD4-206ENST00000588860 CRTAC1Q9NQ79 661 aa9.17□□□□□ -0.94
SMAD4-206ENST00000588860 RGS18Q9NS28 235 aa9.17□□□□□ -0.94
SMAD4-206ENST00000588860 KRT82Q9NSB4 513 aa9.17□□□□□ -0.94
SMAD4-206ENST00000588860 WHRNQ9P202 907 aa9.17□□□□□ -0.94
SMAD4-206ENST00000588860 MTRF1LQ9UGC7 380 aaKnown RBP9.17□□□□□ -0.94
SMAD4-206ENST00000588860 FEZ2Q9UHY8 353 aaPredicted RBP9.17□□□□□ -0.94
SMAD4-206ENST00000588860 CDH9Q9ULB4 789 aa9.17□□□□□ -0.94
SMAD4-206ENST00000588860 PLAAQ9Y263 795 aa9.17□□□□□ -0.94
SMAD4-206ENST00000588860 SHROOM3Q8TF72 1996 aa9.17□□□□□ -0.94
SMAD4-206ENST00000588860 PLXNA3P51805 1871 aa9.17□□□□□ -0.94
SMAD4-206ENST00000588860 TTC3P53804 2025 aa9.16□□□□□ -0.94
SMAD4-206ENST00000588860 GOLGA8KD6RF30 607 aa9.16□□□□□ -0.94
SMAD4-206ENST00000588860 CST8O60676 142 aa9.16□□□□□ -0.94
SMAD4-206ENST00000588860 PPFIA2O75334 1257 aa9.16□□□□□ -0.94
SMAD4-206ENST00000588860 DAB1O75553 588 aa9.16□□□□□ -0.94
SMAD4-206ENST00000588860 AP1G2O75843 785 aa9.16□□□□□ -0.94
SMAD4-206ENST00000588860 MYCP01106 439 aaPredicted RBP9.16□□□□□ -0.94
SMAD4-206ENST00000588860 KRT14P02533 472 aa9.16□□□□□ -0.94
SMAD4-206ENST00000588860 CD48P09326 243 aa9.16□□□□□ -0.94
SMAD4-206ENST00000588860 SELPP16109 830 aa9.16□□□□□ -0.94
SMAD4-206ENST00000588860 PTPN9P43378 593 aa9.16□□□□□ -0.94
SMAD4-206ENST00000588860 BRCC3P46736 316 aa9.16□□□□□ -0.94
SMAD4-206ENST00000588860 RPL34P49207 117 aaKnown RBP9.16□□□□□ -0.94
SMAD4-206ENST00000588860 VPS41P49754 854 aa9.16□□□□□ -0.94
SMAD4-206ENST00000588860 CDR1P51861 262 aa9.16□□□□□ -0.94
SMAD4-206ENST00000588860 VCPP55072 806 aaKnown RBP9.16□□□□□ -0.94
SMAD4-206ENST00000588860 CDH6P55285 790 aa9.16□□□□□ -0.94
SMAD4-206ENST00000588860 MAP3K7CLP57077 242 aa9.16□□□□□ -0.94
SMAD4-206ENST00000588860 PLCB3Q01970 1234 aa9.16□□□□□ -0.94
SMAD4-206ENST00000588860 BYSLQ13895 437 aaKnown RBP9.16□□□□□ -0.94
SMAD4-206ENST00000588860 UAP1Q16222 522 aaPredicted RBP9.16□□□□□ -0.94
SMAD4-206ENST00000588860 TAZQ16635 292 aa9.16□□□□□ -0.94
SMAD4-206ENST00000588860 KIAA0319Q5VV43 1072 aa9.16□□□□□ -0.94
SMAD4-206ENST00000588860 GLB1LQ6UWU2 654 aa9.16□□□□□ -0.94
SMAD4-206ENST00000588860 PAQR9Q6ZVX9 377 aa9.16□□□□□ -0.94
SMAD4-206ENST00000588860 BBS12Q6ZW61 710 aa9.16□□□□□ -0.94
SMAD4-206ENST00000588860 CYP4V2Q6ZWL3 525 aaPredicted RBP9.16□□□□□ -0.94
SMAD4-206ENST00000588860 LRRC8DQ7L1W4 858 aa9.16□□□□□ -0.94
SMAD4-206ENST00000588860 SLC26A9Q7LBE3 791 aa9.16□□□□□ -0.94
SMAD4-206ENST00000588860 FAM35AQ86V20 835 aa9.16□□□□□ -0.94
SMAD4-206ENST00000588860 PIGZQ86VD9 579 aa9.16□□□□□ -0.94
SMAD4-206ENST00000588860 SIX6OS1Q8N1H7 587 aa9.16□□□□□ -0.94
SMAD4-206ENST00000588860 CMASQ8NFW8 434 aaPredicted RBP9.16□□□□□ -0.94
SMAD4-206ENST00000588860 URGCPQ8TCY9 931 aa9.16□□□□□ -0.94
SMAD4-206ENST00000588860 LINC01599Q8WXQ3 324 aa9.16□□□□□ -0.94
SMAD4-206ENST00000588860 ART4Q93070 314 aa9.16□□□□□ -0.94
SMAD4-206ENST00000588860 NCAPGQ9BPX3 1015 aa9.16□□□□□ -0.94
SMAD4-206ENST00000588860 CALN1Q9BXU9 219 aa9.16□□□□□ -0.94
SMAD4-206ENST00000588860 FAM129AQ9BZQ8 928 aa9.16□□□□□ -0.94
SMAD4-206ENST00000588860 LRRC4Q9HBW1 653 aa9.16□□□□□ -0.94
SMAD4-206ENST00000588860 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.16□□□□□ -0.94
SMAD4-206ENST00000588860 GPATCH2LQ9NWQ4 482 aa9.16□□□□□ -0.94
SMAD4-206ENST00000588860 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.16□□□□□ -0.94
SMAD4-206ENST00000588860 DNPEPQ9ULA0 475 aa9.16□□□□□ -0.94
SMAD4-206ENST00000588860 ZNF148Q9UQR1 794 aa9.16□□□□□ -0.94
SMAD4-206ENST00000588860 EFR3BQ9Y2G0 817 aa9.16□□□□□ -0.94
SMAD4-206ENST00000588860 ATP8A1Q9Y2Q0 1164 aa9.16□□□□□ -0.94
SMAD4-206ENST00000588860 GREB1Q4ZG55 1949 aa9.15□□□□□ -0.94
SMAD4-206ENST00000588860 ARHGEF37A1IGU5 675 aa9.15□□□□□ -0.94
SMAD4-206ENST00000588860 MYBPHLA2RUH7 354 aa9.15□□□□□ -0.94
SMAD4-206ENST00000588860 C9IYK1 514 aa9.15□□□□□ -0.94
SMAD4-206ENST00000588860 DNM1LO00429 736 aa9.15□□□□□ -0.94
SMAD4-206ENST00000588860 INPPL1O15357 1258 aa9.15□□□□□ -0.94
SMAD4-206ENST00000588860 BEST1O76090 585 aa9.15□□□□□ -0.94
SMAD4-206ENST00000588860 B3GAT3O94766 335 aa9.15□□□□□ -0.94
SMAD4-206ENST00000588860 EOMESO95936 686 aa9.15□□□□□ -0.94
SMAD4-206ENST00000588860 TFE3P19532 575 aaPredicted RBP9.15□□□□□ -0.94
SMAD4-206ENST00000588860 PCSK1P29120 753 aa9.15□□□□□ -0.94
SMAD4-206ENST00000588860 ADCY8P40145 1251 aa9.15□□□□□ -0.94
SMAD4-206ENST00000588860 RABGGTBP53611 331 aa9.15□□□□□ -0.94
SMAD4-206ENST00000588860 ITGA8P53708 1063 aa9.15□□□□□ -0.94
SMAD4-206ENST00000588860 PMS2P54278 862 aa9.15□□□□□ -0.94
SMAD4-206ENST00000588860 GYS2P54840 703 aa9.15□□□□□ -0.94
SMAD4-206ENST00000588860 OTUD4Q01804 1114 aaKnown RBP9.15□□□□□ -0.94
SMAD4-206ENST00000588860 BFSP2Q13515 415 aa9.15□□□□□ -0.94
SMAD4-206ENST00000588860 DPYSL3Q14195 570 aa9.15□□□□□ -0.94
SMAD4-206ENST00000588860 EFHC1Q5JVL4 640 aa9.15□□□□□ -0.94
SMAD4-206ENST00000588860 CLLU1OSQ5K130 101 aa9.15□□□□□ -0.94
SMAD4-206ENST00000588860 IZUMO3Q5VZ72 239 aa9.15□□□□□ -0.94
SMAD4-206ENST00000588860 DRICH1Q6PGQ1 229 aaPredicted RBP9.15□□□□□ -0.94
SMAD4-206ENST00000588860 DCLRE1AQ6PJP8 1040 aa9.15□□□□□ -0.94
SMAD4-206ENST00000588860 CD300LGQ6UXG3 332 aa9.15□□□□□ -0.94
SMAD4-206ENST00000588860 LRIG3Q6UXM1 1119 aa9.15□□□□□ -0.94
SMAD4-206ENST00000588860 CLEC20AQ6ZU45 233 aa9.15□□□□□ -0.94
SMAD4-206ENST00000588860 SLC24A5Q71RS6 500 aa9.15□□□□□ -0.94
SMAD4-206ENST00000588860 RTN4RL1Q86UN2 441 aaPredicted RBP9.15□□□□□ -0.94
SMAD4-206ENST00000588860 CCDC25Q86WR0 208 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms