RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 DESI2Q9BSY9 194 aa21.22■□□□□ 0.99
ATG4D-208ENST00000588667 ACP6Q9NPH0 428 aa21.22■□□□□ 0.99
ATG4D-208ENST00000588667 ASGR2P07307 311 aa21.21■□□□□ 0.99
ATG4D-208ENST00000588667 SOX5P35711 763 aa21.21■□□□□ 0.99
ATG4D-208ENST00000588667 PLA2G4AP47712 749 aa21.21■□□□□ 0.99
ATG4D-208ENST00000588667 KIF11P52732 1056 aa21.21■□□□□ 0.99
ATG4D-208ENST00000588667 KRT83P78385 493 aa21.21■□□□□ 0.99
ATG4D-208ENST00000588667 HGSNATQ68CP4 663 aa21.21■□□□□ 0.99
ATG4D-208ENST00000588667 PARM1Q6UWI2 310 aa21.21■□□□□ 0.99
ATG4D-208ENST00000588667 UBA3Q8TBC4 463 aa21.21■□□□□ 0.99
ATG4D-208ENST00000588667 ZNF606Q8WXB4 792 aa21.21■□□□□ 0.99
ATG4D-208ENST00000588667 FGF14Q92915 247 aa21.21■□□□□ 0.99
ATG4D-208ENST00000588667 TRPV4Q9HBA0 871 aa21.21■□□□□ 0.99
ATG4D-208ENST00000588667 NUMBLQ9Y6R0 609 aa21.21■□□□□ 0.99
ATG4D-208ENST00000588667 TRIOO75962 3097 aa21.2■□□□□ 0.98
ATG4D-208ENST00000588667 EIF3CLB5ME19 914 aaKnown RBP21.2■□□□□ 0.98
ATG4D-208ENST00000588667 WEE1P30291 646 aa21.2■□□□□ 0.98
ATG4D-208ENST00000588667 EIF4A3P38919 411 aaKnown RBP21.2■□□□□ 0.98
ATG4D-208ENST00000588667 BPIFB4P59827 614 aa21.2■□□□□ 0.98
ATG4D-208ENST00000588667 ARID5AQ03989 594 aa21.2■□□□□ 0.98
ATG4D-208ENST00000588667 TXNDC8Q6A555 127 aa21.2■□□□□ 0.98
ATG4D-208ENST00000588667 MON1AQ86VX9 555 aa21.2■□□□□ 0.98
ATG4D-208ENST00000588667 EIF3CQ99613 913 aaKnown RBP21.2■□□□□ 0.98
ATG4D-208ENST00000588667 SLC46A2Q9BY10 475 aa21.2■□□□□ 0.98
ATG4D-208ENST00000588667 MUTYHQ9UIF7 546 aa21.2■□□□□ 0.98
ATG4D-208ENST00000588667 SORCS3Q9UPU3 1222 aa21.2■□□□□ 0.98
ATG4D-208ENST00000588667 SCML2Q9UQR0 700 aa21.2■□□□□ 0.98
ATG4D-208ENST00000588667 HELZP42694 1942 aaKnown RBP21.2■□□□□ 0.98
ATG4D-208ENST00000588667 ZNF840PA6NDX5 716 aa21.19■□□□□ 0.98
ATG4D-208ENST00000588667 TNFRSF10AO00220 468 aa21.19■□□□□ 0.98
ATG4D-208ENST00000588667 TULP2O00295 520 aa21.19■□□□□ 0.98
ATG4D-208ENST00000588667 AKR1B10O60218 316 aa21.19■□□□□ 0.98
ATG4D-208ENST00000588667 ECI2O75521 394 aa21.19■□□□□ 0.98
ATG4D-208ENST00000588667 PLEKP08567 350 aaPredicted RBP21.19■□□□□ 0.98
ATG4D-208ENST00000588667 PFKLP17858 780 aa21.19■□□□□ 0.98
ATG4D-208ENST00000588667 FCARP24071 287 aa21.19■□□□□ 0.98
ATG4D-208ENST00000588667 PRKCIP41743 596 aa21.19■□□□□ 0.98
ATG4D-208ENST00000588667 SPA17Q15506 151 aa21.19■□□□□ 0.98
ATG4D-208ENST00000588667 RAB41Q5JT25 222 aa21.19■□□□□ 0.98
ATG4D-208ENST00000588667 IRF2BP2Q7Z5L9 587 aa21.19■□□□□ 0.98
ATG4D-208ENST00000588667 SLC47A2Q86VL8 602 aa21.19■□□□□ 0.98
ATG4D-208ENST00000588667 MAB21L3Q8N8X9 362 aa21.19■□□□□ 0.98
ATG4D-208ENST00000588667 RSAD2Q8WXG1 361 aa21.19■□□□□ 0.98
ATG4D-208ENST00000588667 SECISBP2LQ93073 1101 aaKnown RBP21.19■□□□□ 0.98
ATG4D-208ENST00000588667 ZFP14Q9HCL3 533 aa21.19■□□□□ 0.98
ATG4D-208ENST00000588667 USP3Q9Y6I4 520 aa21.19■□□□□ 0.98
ATG4D-208ENST00000588667 ARID3BQ8IVW6 561 aaPredicted RBP21.18■□□□□ 0.98
ATG4D-208ENST00000588667 REXO1L1PQ8IX06 675 aa21.18■□□□□ 0.98
ATG4D-208ENST00000588667 CMTM8Q8IZV2 173 aa21.18■□□□□ 0.98
ATG4D-208ENST00000588667 SLC35F5Q8WV83 523 aa21.18■□□□□ 0.98
ATG4D-208ENST00000588667 KCTD13Q8WZ19 329 aa21.18■□□□□ 0.98
ATG4D-208ENST00000588667 ELSPBP1Q96BH3 223 aa21.18■□□□□ 0.98
ATG4D-208ENST00000588667 TRPC7Q9HCX4 862 aa21.18■□□□□ 0.98
ATG4D-208ENST00000588667 GMIPQ9P107 970 aa21.18■□□□□ 0.98
ATG4D-208ENST00000588667 GFPT2O94808 682 aa21.18■□□□□ 0.98
ATG4D-208ENST00000588667 ZDHHC11BP0C7U3 371 aa21.18■□□□□ 0.98
ATG4D-208ENST00000588667 AVPR1AP37288 418 aa21.18■□□□□ 0.98
ATG4D-208ENST00000588667 PDE6CP51160 858 aa21.18■□□□□ 0.98
ATG4D-208ENST00000588667 TDGQ13569 410 aa21.18■□□□□ 0.98
ATG4D-208ENST00000588667 SNX30Q5VWJ9 437 aa21.18■□□□□ 0.98
ATG4D-208ENST00000588667 ACRBPQ8NEB7 543 aa21.18■□□□□ 0.98
ATG4D-208ENST00000588667 ST13P5Q8NFI4 369 aaPredicted RBP21.18■□□□□ 0.98
ATG4D-208ENST00000588667 E2F7Q96AV8 911 aa21.18■□□□□ 0.98
ATG4D-208ENST00000588667 KXD1Q9BQD3 176 aa21.18■□□□□ 0.98
ATG4D-208ENST00000588667 HAUS4Q9H6D7 363 aa21.18■□□□□ 0.98
ATG4D-208ENST00000588667 LRRC4Q9HBW1 653 aa21.18■□□□□ 0.98
ATG4D-208ENST00000588667 TLR8Q9NR97 1041 aaKnown RBP21.18■□□□□ 0.98
ATG4D-208ENST00000588667 PCDHGC3Q9UN70 934 aa21.18■□□□□ 0.98
ATG4D-208ENST00000588667 TRAV19A0A0A6YYK7 116 aa21.17■□□□□ 0.98
ATG4D-208ENST00000588667 C2orf78A6NCI8 922 aa21.17■□□□□ 0.98
ATG4D-208ENST00000588667 GPD2P43304 727 aa21.17■□□□□ 0.98
ATG4D-208ENST00000588667 TUBP50607 506 aa21.17■□□□□ 0.98
ATG4D-208ENST00000588667 TKTL1P51854 596 aa21.17■□□□□ 0.98
ATG4D-208ENST00000588667 TANGO2Q6ICL3 276 aa21.17■□□□□ 0.98
ATG4D-208ENST00000588667 DENND1BQ6P3S1 775 aa21.17■□□□□ 0.98
ATG4D-208ENST00000588667 VPS36Q86VN1 386 aa21.17■□□□□ 0.98
ATG4D-208ENST00000588667 GPIHBP1Q8IV16 184 aa21.17■□□□□ 0.98
ATG4D-208ENST00000588667 SLC44A3Q8N4M1 653 aa21.17■□□□□ 0.98
ATG4D-208ENST00000588667 C16orf45Q96MC5 204 aaPredicted RBP21.17■□□□□ 0.98
ATG4D-208ENST00000588667 RPP25Q9BUL9 199 aaKnown RBP21.17■□□□□ 0.98
ATG4D-208ENST00000588667 CHORDC1Q9UHD1 332 aaPredicted RBP21.17■□□□□ 0.98
ATG4D-208ENST00000588667 KIF2AO00139 706 aaPredicted RBP21.16■□□□□ 0.98
ATG4D-208ENST00000588667 DCXO43602 365 aa21.16■□□□□ 0.98
ATG4D-208ENST00000588667 LCA5LO95447 670 aa21.16■□□□□ 0.98
ATG4D-208ENST00000588667 PRAMEF12O95522 483 aa21.16■□□□□ 0.98
ATG4D-208ENST00000588667 ABL1P00519 1130 aa21.16■□□□□ 0.98
ATG4D-208ENST00000588667 OAS1P00973 400 aaKnown RBP21.16■□□□□ 0.98
ATG4D-208ENST00000588667 CYP11B1P15538 503 aa21.16■□□□□ 0.98
ATG4D-208ENST00000588667 ASTE1Q2TB18 679 aaPredicted RBP21.16■□□□□ 0.98
ATG4D-208ENST00000588667 DNTTIP2Q5QJE6 756 aaKnown RBP21.16■□□□□ 0.98
ATG4D-208ENST00000588667 PMF1Q6P1K2 205 aa21.16■□□□□ 0.98
ATG4D-208ENST00000588667 NYAP1Q6ZVC0 841 aa21.16■□□□□ 0.98
ATG4D-208ENST00000588667 KHSRPQ92945 711 aaKnown RBP eCLIP21.16■□□□□ 0.98
ATG4D-208ENST00000588667 HSFY1Q96LI6 401 aa21.16■□□□□ 0.98
ATG4D-208ENST00000588667 OBP2AQ9NY56 170 aa21.16■□□□□ 0.98
ATG4D-208ENST00000588667 OLFM2O95897 454 aa21.15■□□□□ 0.98
ATG4D-208ENST00000588667 TUBB4AP04350 444 aa21.15■□□□□ 0.98
ATG4D-208ENST00000588667 CKMP06732 381 aa21.15■□□□□ 0.98
ATG4D-208ENST00000588667 CFHP08603 1231 aa21.15■□□□□ 0.98
ATG4D-208ENST00000588667 USP17L7P0C7H9 530 aa21.15■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms