RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 PKMYT1Q99640 499 aa10.67□□□□□ -0.7
APOC1-201ENST00000586638 MRPL9Q9BYD2 267 aaKnown RBP10.67□□□□□ -0.7
APOC1-201ENST00000586638 DDX47Q9H0S4 455 aaKnown RBP10.67□□□□□ -0.7
APOC1-201ENST00000586638 ZWILCHQ9H900 591 aa10.67□□□□□ -0.7
APOC1-201ENST00000586638 FAM50BQ9Y247 325 aa10.67□□□□□ -0.7
APOC1-201ENST00000586638 NR2E1Q9Y466 385 aa10.67□□□□□ -0.7
APOC1-201ENST00000586638 PLXNA3P51805 1871 aa10.67□□□□□ -0.7
APOC1-201ENST00000586638 NT5C1B-RDH14C9J2C7 533 aa10.66□□□□□ -0.7
APOC1-201ENST00000586638 CCDC188H7C350 402 aa10.66□□□□□ -0.7
APOC1-201ENST00000586638 NRP1O14786 923 aa10.66□□□□□ -0.7
APOC1-201ENST00000586638 RAD51CO43502 376 aa10.66□□□□□ -0.7
APOC1-201ENST00000586638 DCXO43602 365 aa10.66□□□□□ -0.7
APOC1-201ENST00000586638 DAB1O75553 588 aa10.66□□□□□ -0.7
APOC1-201ENST00000586638 ZMYND10O75800 440 aa10.66□□□□□ -0.7
APOC1-201ENST00000586638 SEC31AO94979 1220 aaKnown RBP10.66□□□□□ -0.7
APOC1-201ENST00000586638 ACADSBP45954 432 aa10.66□□□□□ -0.7
APOC1-201ENST00000586638 RPL34P49207 117 aaKnown RBP10.66□□□□□ -0.7
APOC1-201ENST00000586638 TUBB4BP68371 445 aa10.66□□□□□ -0.7
APOC1-201ENST00000586638 TSPY1Q01534 308 aa10.66□□□□□ -0.7
APOC1-201ENST00000586638 YWHAHQ04917 246 aaPredicted RBP10.66□□□□□ -0.7
APOC1-201ENST00000586638 ADCY1Q08828 1119 aa10.66□□□□□ -0.7
APOC1-201ENST00000586638 CDO1Q16878 200 aa10.66□□□□□ -0.7
APOC1-201ENST00000586638 KCTD19Q17RG1 926 aaPredicted RBP10.66□□□□□ -0.7
APOC1-201ENST00000586638 SMTNL2Q2TAL5 461 aa10.66□□□□□ -0.7
APOC1-201ENST00000586638 ATP13A4Q4VNC1 1196 aa10.66□□□□□ -0.7
APOC1-201ENST00000586638 TCEAL5Q5H9L2 206 aa10.66□□□□□ -0.7
APOC1-201ENST00000586638 SH3PXD2AQ5TCZ1 1133 aa10.66□□□□□ -0.7
APOC1-201ENST00000586638 CCDC70Q6NSX1 233 aa10.66□□□□□ -0.7
APOC1-201ENST00000586638 FUT10Q6P4F1 479 aa10.66□□□□□ -0.7
APOC1-201ENST00000586638 SLC26A9Q7LBE3 791 aa10.66□□□□□ -0.7
APOC1-201ENST00000586638 ANKS1BQ7Z6G8 1248 aa10.66□□□□□ -0.7
APOC1-201ENST00000586638 LRRTM3Q86VH5 581 aa10.66□□□□□ -0.7
APOC1-201ENST00000586638 TMEM173Q86WV6 379 aaPredicted RBP10.66□□□□□ -0.7
APOC1-201ENST00000586638 KATNAL2Q8IYT4 538 aa10.66□□□□□ -0.7
APOC1-201ENST00000586638 ZDHHC14Q8IZN3 488 aa10.66□□□□□ -0.7
APOC1-201ENST00000586638 THEM5Q8N1Q8 247 aa10.66□□□□□ -0.7
APOC1-201ENST00000586638 LRRC43Q8N309 656 aa10.66□□□□□ -0.7
APOC1-201ENST00000586638 RNF25Q96BH1 459 aaPredicted RBP10.66□□□□□ -0.7
APOC1-201ENST00000586638 PABPC5Q96DU9 382 aaKnown RBP10.66□□□□□ -0.7
APOC1-201ENST00000586638 SMARCD1Q96GM5 515 aa10.66□□□□□ -0.7
APOC1-201ENST00000586638 B3GALT6Q96L58 329 aa10.66□□□□□ -0.7
APOC1-201ENST00000586638 HSFY1Q96LI6 401 aa10.66□□□□□ -0.7
APOC1-201ENST00000586638 CFAP57Q96MR6 1250 aa10.66□□□□□ -0.7
APOC1-201ENST00000586638 SLITRK1Q96PX8 696 aa10.66□□□□□ -0.7
APOC1-201ENST00000586638 PEBP4Q96S96 227 aa10.66□□□□□ -0.7
APOC1-201ENST00000586638 ACBD6Q9BR61 282 aa10.66□□□□□ -0.7
APOC1-201ENST00000586638 CYLDQ9NQC7 956 aa10.66□□□□□ -0.7
APOC1-201ENST00000586638 DMGDHQ9UI17 866 aaKnown RBP10.66□□□□□ -0.7
APOC1-201ENST00000586638 ADAM28Q9UKQ2 775 aa10.66□□□□□ -0.7
APOC1-201ENST00000586638 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.66□□□□□ -0.7
APOC1-201ENST00000586638 ZNF638Q14966 1978 aaKnown RBP10.66□□□□□ -0.7
APOC1-201ENST00000586638 COL4A4P53420 1690 aaPredicted RBP10.66□□□□□ -0.7
APOC1-201ENST00000586638 GOLGA6L10A0A0M3HER8 536 aa10.65□□□□□ -0.7
APOC1-201ENST00000586638 TARSL2A2RTX5 802 aaKnown RBP10.65□□□□□ -0.7
APOC1-201ENST00000586638 ZSCAN5CA6NGD5 496 aaPredicted RBP10.65□□□□□ -0.7
APOC1-201ENST00000586638 HHLA1C9JL84 531 aa10.65□□□□□ -0.7
APOC1-201ENST00000586638 PHF2O75151 1096 aa10.65□□□□□ -0.7
APOC1-201ENST00000586638 TADA2AO75478 443 aa10.65□□□□□ -0.7
APOC1-201ENST00000586638 HEXIM1O94992 359 aaKnown RBP10.65□□□□□ -0.7
APOC1-201ENST00000586638 PDGFRAP16234 1089 aa10.65□□□□□ -0.7
APOC1-201ENST00000586638 TFE3P19532 575 aaPredicted RBP10.65□□□□□ -0.7
APOC1-201ENST00000586638 BDNFP23560 247 aa10.65□□□□□ -0.7
APOC1-201ENST00000586638 IL1R2P27930 398 aa10.65□□□□□ -0.7
APOC1-201ENST00000586638 SCNN1AP37088 669 aa10.65□□□□□ -0.7
APOC1-201ENST00000586638 NDUFV1P49821 464 aa10.65□□□□□ -0.7
APOC1-201ENST00000586638 TKTL1P51854 596 aa10.65□□□□□ -0.7
APOC1-201ENST00000586638 ZNF143P52747 638 aaPredicted RBP10.65□□□□□ -0.7
APOC1-201ENST00000586638 SLC8A3P57103 927 aa10.65□□□□□ -0.7
APOC1-201ENST00000586638 SNX16P57768 344 aa10.65□□□□□ -0.7
APOC1-201ENST00000586638 ATP11AP98196 1134 aa10.65□□□□□ -0.7
APOC1-201ENST00000586638 SMC1AQ14683 1233 aaKnown RBP10.65□□□□□ -0.7
APOC1-201ENST00000586638 SIX1Q15475 284 aaPredicted RBP10.65□□□□□ -0.7
APOC1-201ENST00000586638 CCDC14Q49A88 953 aa10.65□□□□□ -0.7
APOC1-201ENST00000586638 SLC39A12Q504Y0 691 aa10.65□□□□□ -0.7
APOC1-201ENST00000586638 VARS2Q5ST30 1063 aaKnown RBP10.65□□□□□ -0.7
APOC1-201ENST00000586638 FAM171BQ6P995 826 aa10.65□□□□□ -0.7
APOC1-201ENST00000586638 CYP4V2Q6ZWL3 525 aaPredicted RBP10.65□□□□□ -0.7
APOC1-201ENST00000586638 ZDHHC17Q8IUH5 632 aa10.65□□□□□ -0.7
APOC1-201ENST00000586638 SCUBE3Q8IX30 993 aa10.65□□□□□ -0.7
APOC1-201ENST00000586638 SIX6OS1Q8N1H7 587 aa10.65□□□□□ -0.7
APOC1-201ENST00000586638 UBE2Q2Q8WVN8 375 aa10.65□□□□□ -0.7
APOC1-201ENST00000586638 FAM149B1Q96BN6 582 aa10.65□□□□□ -0.7
APOC1-201ENST00000586638 RBM41Q96IZ5 413 aaKnown RBP10.65□□□□□ -0.7
APOC1-201ENST00000586638 NAP1L3Q99457 506 aaPredicted RBP10.65□□□□□ -0.7
APOC1-201ENST00000586638 HINFPQ9BQA5 517 aa10.65□□□□□ -0.7
APOC1-201ENST00000586638 TMEM175Q9BSA9 504 aa10.65□□□□□ -0.7
APOC1-201ENST00000586638 TRIM51Q9BSJ1 452 aa10.65□□□□□ -0.7
APOC1-201ENST00000586638 CNPY3Q9BT09 278 aa10.65□□□□□ -0.7
APOC1-201ENST00000586638 GPR62Q9BZJ7 368 aa10.65□□□□□ -0.7
APOC1-201ENST00000586638 ULBP1Q9BZM6 244 aa10.65□□□□□ -0.7
APOC1-201ENST00000586638 LRRC4Q9HBW1 653 aa10.65□□□□□ -0.7
APOC1-201ENST00000586638 NGRNQ9NPE2 291 aaKnown RBP10.65□□□□□ -0.7
APOC1-201ENST00000586638 ARGLU1Q9NWB6 273 aaPredicted RBP10.65□□□□□ -0.7
APOC1-201ENST00000586638 ASNSD1Q9NWL6 643 aa10.65□□□□□ -0.7
APOC1-201ENST00000586638 PRKAG3Q9UGI9 489 aa10.65□□□□□ -0.7
APOC1-201ENST00000586638 PCSK1NQ9UHG2 260 aa10.65□□□□□ -0.7
APOC1-201ENST00000586638 RAB21Q9UL25 225 aa10.65□□□□□ -0.7
APOC1-201ENST00000586638 FAN1Q9Y2M0 1017 aa10.65□□□□□ -0.7
APOC1-201ENST00000586638 SF3B1O75533 1304 aaKnown RBP eCLIP10.64□□□□□ -0.71
APOC1-201ENST00000586638 LRRD1A4D1F6 860 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms