RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 LRRC57Q8N9N7 239 aa13.29□□□□□ -0.28
VMP1-202ENST00000585847 ANKRD52Q8NB46 1076 aa13.29□□□□□ -0.28
VMP1-202ENST00000585847 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.29□□□□□ -0.28
VMP1-202ENST00000585847 ZNF592Q92610 1267 aa13.29□□□□□ -0.28
VMP1-202ENST00000585847 HSFY1Q96LI6 401 aa13.29□□□□□ -0.28
VMP1-202ENST00000585847 WDR24Q96S15 920 aa13.29□□□□□ -0.28
VMP1-202ENST00000585847 KCNK16Q96T55 309 aa13.29□□□□□ -0.28
VMP1-202ENST00000585847 TRIM62Q9BVG3 475 aa13.29□□□□□ -0.28
VMP1-202ENST00000585847 LRRC3Q9BY71 257 aa13.29□□□□□ -0.28
VMP1-202ENST00000585847 UBXN6Q9BZV1 441 aa13.29□□□□□ -0.28
VMP1-202ENST00000585847 THAP2Q9H0W7 228 aa13.29□□□□□ -0.28
VMP1-202ENST00000585847 SYNCQ9H7C4 482 aa13.29□□□□□ -0.28
VMP1-202ENST00000585847 PNPLA8Q9NP80 782 aa13.29□□□□□ -0.28
VMP1-202ENST00000585847 CD320Q9NPF0 282 aa13.29□□□□□ -0.28
VMP1-202ENST00000585847 C11orf16Q9NQ32 467 aa13.29□□□□□ -0.28
VMP1-202ENST00000585847 CDC23Q9UJX2 597 aa13.29□□□□□ -0.28
VMP1-202ENST00000585847 TSPAN16Q9UKR8 245 aa13.29□□□□□ -0.28
VMP1-202ENST00000585847 FAM50BQ9Y247 325 aa13.29□□□□□ -0.28
VMP1-202ENST00000585847 SAR1BQ9Y6B6 198 aa13.29□□□□□ -0.28
VMP1-202ENST00000585847 DENND4AQ7Z401 1863 aa13.29□□□□□ -0.28
VMP1-202ENST00000585847 ANAPC1Q9H1A4 1944 aa13.29□□□□□ -0.28
VMP1-202ENST00000585847 M0QYV0 167 aa13.28□□□□□ -0.28
VMP1-202ENST00000585847 TULP2O00295 520 aa13.28□□□□□ -0.28
VMP1-202ENST00000585847 TNFRSF10BO14763 440 aa13.28□□□□□ -0.28
VMP1-202ENST00000585847 MICAL2O94851 1124 aa13.28□□□□□ -0.28
VMP1-202ENST00000585847 ABCB4P21439 1286 aa13.28□□□□□ -0.28
VMP1-202ENST00000585847 HOXA9P31269 272 aa13.28□□□□□ -0.28
VMP1-202ENST00000585847 ITIH3Q06033 890 aa13.28□□□□□ -0.28
VMP1-202ENST00000585847 PDCLQ13371 301 aa13.28□□□□□ -0.28
VMP1-202ENST00000585847 ZNF268Q14587 947 aaPredicted RBP13.28□□□□□ -0.28
VMP1-202ENST00000585847 ACAP1Q15027 740 aa13.28□□□□□ -0.28
VMP1-202ENST00000585847 GOLGA7BQ2TAP0 167 aa13.28□□□□□ -0.28
VMP1-202ENST00000585847 MGAT5BQ3V5L5 792 aa13.28□□□□□ -0.28
VMP1-202ENST00000585847 DNAJC24Q6P3W2 148 aa13.28□□□□□ -0.28
VMP1-202ENST00000585847 VSTM1Q6UX27 236 aa13.28□□□□□ -0.28
VMP1-202ENST00000585847 CLEC20AQ6ZU45 233 aa13.28□□□□□ -0.28
VMP1-202ENST00000585847 RTL10Q7L3V2 364 aa13.28□□□□□ -0.28
VMP1-202ENST00000585847 WDTC1Q8N5D0 677 aa13.28□□□□□ -0.28
VMP1-202ENST00000585847 UBL4BQ8N7F7 174 aa13.28□□□□□ -0.28
VMP1-202ENST00000585847 CMASQ8NFW8 434 aaPredicted RBP13.28□□□□□ -0.28
VMP1-202ENST00000585847 SLC35G2Q8TBE7 412 aa13.28□□□□□ -0.28
VMP1-202ENST00000585847 ZNF564Q8TBZ8 553 aaPredicted RBP13.28□□□□□ -0.28
VMP1-202ENST00000585847 CEP295NLQ96MC4 621 aa13.28□□□□□ -0.28
VMP1-202ENST00000585847 NAP1L3Q99457 506 aaPredicted RBP13.28□□□□□ -0.28
VMP1-202ENST00000585847 SEPT5Q99719 369 aaPredicted RBP13.28□□□□□ -0.28
VMP1-202ENST00000585847 PACSIN1Q9BY11 444 aa13.28□□□□□ -0.28
VMP1-202ENST00000585847 DUSP16Q9BY84 665 aa13.28□□□□□ -0.28
VMP1-202ENST00000585847 KRT82Q9NSB4 513 aa13.28□□□□□ -0.28
VMP1-202ENST00000585847 DZANK1Q9NVP4 752 aa13.28□□□□□ -0.28
VMP1-202ENST00000585847 SNX12Q9UMY4 172 aa13.28□□□□□ -0.28
VMP1-202ENST00000585847 CAPN6Q9Y6Q1 641 aa13.28□□□□□ -0.28
VMP1-202ENST00000585847 CCDC195A0A1B0GUA6 201 aa13.27□□□□□ -0.29
VMP1-202ENST00000585847 CCDC66A2RUB6 948 aa13.27□□□□□ -0.29
VMP1-202ENST00000585847 GRID2IPA4D2P6 1211 aa13.27□□□□□ -0.29
VMP1-202ENST00000585847 TMCO5BA8MYB1 307 aa13.27□□□□□ -0.29
VMP1-202ENST00000585847 F8VP50 259 aa13.27□□□□□ -0.29
VMP1-202ENST00000585847 MYO1FO00160 1098 aa13.27□□□□□ -0.29
VMP1-202ENST00000585847 PRRG1O14668 218 aa13.27□□□□□ -0.29
VMP1-202ENST00000585847 CCL16O15467 120 aa13.27□□□□□ -0.29
VMP1-202ENST00000585847 NCK2O43639 380 aa13.27□□□□□ -0.29
VMP1-202ENST00000585847 PALMO75781 387 aa13.27□□□□□ -0.29
VMP1-202ENST00000585847 AP1G2O75843 785 aa13.27□□□□□ -0.29
VMP1-202ENST00000585847 MOCS3O95396 460 aa13.27□□□□□ -0.29
VMP1-202ENST00000585847 ERBB2P04626 1255 aa13.27□□□□□ -0.29
VMP1-202ENST00000585847 POU2F2P09086 479 aa13.27□□□□□ -0.29
VMP1-202ENST00000585847 IL9P15248 144 aa13.27□□□□□ -0.29
VMP1-202ENST00000585847 HMGA1P17096 107 aaKnown RBP13.27□□□□□ -0.29
VMP1-202ENST00000585847 ELF1P32519 619 aa13.27□□□□□ -0.29
VMP1-202ENST00000585847 GPD2P43304 727 aa13.27□□□□□ -0.29
VMP1-202ENST00000585847 RPL34P49207 117 aaKnown RBP13.27□□□□□ -0.29
VMP1-202ENST00000585847 TUFMP49411 452 aaKnown RBP13.27□□□□□ -0.29
VMP1-202ENST00000585847 MTMR3Q13615 1198 aa13.27□□□□□ -0.29
VMP1-202ENST00000585847 PPM1LQ5SGD2 360 aa13.27□□□□□ -0.29
VMP1-202ENST00000585847 RARS2Q5T160 578 aaKnown RBP13.27□□□□□ -0.29
VMP1-202ENST00000585847 MEI1Q5TIA1 1274 aa13.27□□□□□ -0.29
VMP1-202ENST00000585847 DENND1BQ6P3S1 775 aa13.27□□□□□ -0.29
VMP1-202ENST00000585847 POTEHQ6S545 545 aa13.27□□□□□ -0.29
VMP1-202ENST00000585847 CCDC149Q6ZUS6 474 aa13.27□□□□□ -0.29
VMP1-202ENST00000585847 GPRIN1Q7Z2K8 1008 aa13.27□□□□□ -0.29
VMP1-202ENST00000585847 PEX26Q7Z412 305 aa13.27□□□□□ -0.29
VMP1-202ENST00000585847 DAAM2Q86T65 1068 aa13.27□□□□□ -0.29
VMP1-202ENST00000585847 TMC8Q8IU68 726 aa13.27□□□□□ -0.29
VMP1-202ENST00000585847 UBA3Q8TBC4 463 aa13.27□□□□□ -0.29
VMP1-202ENST00000585847 GPR152Q8TDT2 470 aa13.27□□□□□ -0.29
VMP1-202ENST00000585847 GIPC2Q8TF65 315 aa13.27□□□□□ -0.29
VMP1-202ENST00000585847 C18orf8Q96DM3 657 aa13.27□□□□□ -0.29
VMP1-202ENST00000585847 SMARCD1Q96GM5 515 aa13.27□□□□□ -0.29
VMP1-202ENST00000585847 PBKQ96KB5 322 aa13.27□□□□□ -0.29
VMP1-202ENST00000585847 C8orf48Q96LL4 319 aa13.27□□□□□ -0.29
VMP1-202ENST00000585847 MED10Q9BTT4 135 aa13.27□□□□□ -0.29
VMP1-202ENST00000585847 NUP85Q9BW27 656 aa13.27□□□□□ -0.29
VMP1-202ENST00000585847 APOL5Q9BWW9 433 aa13.27□□□□□ -0.29
VMP1-202ENST00000585847 PRKD2Q9BZL6 878 aa13.27□□□□□ -0.29
VMP1-202ENST00000585847 SFXN1Q9H9B4 322 aa13.27□□□□□ -0.29
VMP1-202ENST00000585847 ZNF334Q9HCZ1 680 aaPredicted RBP13.27□□□□□ -0.29
VMP1-202ENST00000585847 HCFC1R1Q9NWW0 138 aa13.27□□□□□ -0.29
VMP1-202ENST00000585847 ZDHHC7Q9NXF8 308 aa13.27□□□□□ -0.29
VMP1-202ENST00000585847 IP6K2Q9UHH9 426 aa13.27□□□□□ -0.29
VMP1-202ENST00000585847 CYTH4Q9UIA0 394 aa13.27□□□□□ -0.29
VMP1-202ENST00000585847 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms