RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 ANKRD20A12PQ8NF67 263 aa13.27□□□□□ -0.29
SMARCE1-218ENST00000582955 OSCP1Q8WVF1 389 aa13.27□□□□□ -0.29
SMARCE1-218ENST00000582955 MSANTD3Q96H12 275 aa13.27□□□□□ -0.29
SMARCE1-218ENST00000582955 NELL2Q99435 816 aa13.27□□□□□ -0.29
SMARCE1-218ENST00000582955 PRRX2Q99811 253 aa13.27□□□□□ -0.29
SMARCE1-218ENST00000582955 FAM83CQ9BQN1 747 aa13.27□□□□□ -0.29
SMARCE1-218ENST00000582955 UBXN6Q9BZV1 441 aa13.27□□□□□ -0.29
SMARCE1-218ENST00000582955 NAT10Q9H0A0 1025 aaKnown RBP13.27□□□□□ -0.29
SMARCE1-218ENST00000582955 KCNH6Q9H252 994 aa13.27□□□□□ -0.29
SMARCE1-218ENST00000582955 VPS16Q9H269 839 aa13.27□□□□□ -0.29
SMARCE1-218ENST00000582955 NMUR1Q9HB89 426 aa13.27□□□□□ -0.29
SMARCE1-218ENST00000582955 HPS4Q9NQG7 708 aa13.27□□□□□ -0.29
SMARCE1-218ENST00000582955 CFAP97Q9P2B7 532 aa13.27□□□□□ -0.29
SMARCE1-218ENST00000582955 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.27□□□□□ -0.29
SMARCE1-218ENST00000582955 MTF2Q9Y483 593 aaPredicted RBP13.27□□□□□ -0.29
SMARCE1-218ENST00000582955 SPECC1L-ADORA2AF8WAN1 911 aa13.26□□□□□ -0.29
SMARCE1-218ENST00000582955 SCAMP3O14828 347 aaKnown RBP13.26□□□□□ -0.29
SMARCE1-218ENST00000582955 NCAM2O15394 837 aa13.26□□□□□ -0.29
SMARCE1-218ENST00000582955 THAP12O43422 761 aa13.26□□□□□ -0.29
SMARCE1-218ENST00000582955 GALR2O43603 387 aaPredicted RBP13.26□□□□□ -0.29
SMARCE1-218ENST00000582955 LETM1O95202 739 aaPredicted RBP13.26□□□□□ -0.29
SMARCE1-218ENST00000582955 IRF1P10914 325 aa13.26□□□□□ -0.29
SMARCE1-218ENST00000582955 RARGP13631 454 aa13.26□□□□□ -0.29
SMARCE1-218ENST00000582955 TCF3P15923 654 aa13.26□□□□□ -0.29
SMARCE1-218ENST00000582955 GNA15P30679 374 aa13.26□□□□□ -0.29
SMARCE1-218ENST00000582955 CTHP32929 405 aa13.26□□□□□ -0.29
SMARCE1-218ENST00000582955 ATP5C1P36542 298 aaKnown RBP13.26□□□□□ -0.29
SMARCE1-218ENST00000582955 PLA2G4AP47712 749 aa13.26□□□□□ -0.29
SMARCE1-218ENST00000582955 RGS7P49802 495 aa13.26□□□□□ -0.29
SMARCE1-218ENST00000582955 ZXDBP98169 803 aa13.26□□□□□ -0.29
SMARCE1-218ENST00000582955 ADIGQ0VDE8 80 aa13.26□□□□□ -0.29
SMARCE1-218ENST00000582955 KRT31Q15323 416 aa13.26□□□□□ -0.29
SMARCE1-218ENST00000582955 KLHL40Q2TBA0 621 aa13.26□□□□□ -0.29
SMARCE1-218ENST00000582955 RAB41Q5JT25 222 aa13.26□□□□□ -0.29
SMARCE1-218ENST00000582955 C1orf228Q6PIY5 440 aa13.26□□□□□ -0.29
SMARCE1-218ENST00000582955 RALGPS2Q86X27 583 aaPredicted RBP13.26□□□□□ -0.29
SMARCE1-218ENST00000582955 SIX6OS1Q8N1H7 587 aa13.26□□□□□ -0.29
SMARCE1-218ENST00000582955 CPA6Q8N4T0 437 aa13.26□□□□□ -0.29
SMARCE1-218ENST00000582955 DTWD2Q8NBA8 298 aa13.26□□□□□ -0.29
SMARCE1-218ENST00000582955 PRSS33Q8NF86 280 aa13.26□□□□□ -0.29
SMARCE1-218ENST00000582955 SECISBP2LQ93073 1101 aaKnown RBP13.26□□□□□ -0.29
SMARCE1-218ENST00000582955 ATP2A3Q93084 1043 aa13.26□□□□□ -0.29
SMARCE1-218ENST00000582955 ZSWIM1Q9BR11 485 aa13.26□□□□□ -0.29
SMARCE1-218ENST00000582955 LSM14BQ9BX40 385 aaKnown RBP13.26□□□□□ -0.29
SMARCE1-218ENST00000582955 OSBPL6Q9BZF3 934 aa13.26□□□□□ -0.29
SMARCE1-218ENST00000582955 ULBP1Q9BZM6 244 aa13.26□□□□□ -0.29
SMARCE1-218ENST00000582955 SIX2Q9NPC8 291 aa13.26□□□□□ -0.29
SMARCE1-218ENST00000582955 CYLDQ9NQC7 956 aa13.26□□□□□ -0.29
SMARCE1-218ENST00000582955 OSER1Q9NX31 292 aa13.26□□□□□ -0.29
SMARCE1-218ENST00000582955 DNAJC12Q9UKB3 198 aa13.26□□□□□ -0.29
SMARCE1-218ENST00000582955 NUDT5Q9UKK9 219 aa13.26□□□□□ -0.29
SMARCE1-218ENST00000582955 KIF26AQ9ULI4 1882 aaPredicted RBP13.26□□□□□ -0.29
SMARCE1-218ENST00000582955 CNTN6Q9UQ52 1028 aa13.26□□□□□ -0.29
SMARCE1-218ENST00000582955 SH3BP1Q9Y3L3 701 aa13.26□□□□□ -0.29
SMARCE1-218ENST00000582955 USP3Q9Y6I4 520 aa13.26□□□□□ -0.29
SMARCE1-218ENST00000582955 SHISA7A6NL88 538 aa13.25□□□□□ -0.29
SMARCE1-218ENST00000582955 MED7O43513 233 aa13.25□□□□□ -0.29
SMARCE1-218ENST00000582955 TBX18O95935 607 aa13.25□□□□□ -0.29
SMARCE1-218ENST00000582955 ZBED1O96006 694 aa13.25□□□□□ -0.29
SMARCE1-218ENST00000582955 RALAP11233 206 aa13.25□□□□□ -0.29
SMARCE1-218ENST00000582955 LCP1P13796 627 aa13.25□□□□□ -0.29
SMARCE1-218ENST00000582955 CDK11BP21127 795 aaKnown RBP13.25□□□□□ -0.29
SMARCE1-218ENST00000582955 PSEN1P49768 467 aa13.25□□□□□ -0.29
SMARCE1-218ENST00000582955 NUBP1P53384 320 aa13.25□□□□□ -0.29
SMARCE1-218ENST00000582955 MLLT6P55198 1093 aaPredicted RBP13.25□□□□□ -0.29
SMARCE1-218ENST00000582955 KCNMA1Q12791 1236 aa13.25□□□□□ -0.29
SMARCE1-218ENST00000582955 RAPGEF1Q13905 1077 aa13.25□□□□□ -0.29
SMARCE1-218ENST00000582955 PKDCCQ504Y2 493 aa13.25□□□□□ -0.29
SMARCE1-218ENST00000582955 C10orf120Q5SQS8 335 aa13.25□□□□□ -0.29
SMARCE1-218ENST00000582955 FKBP15Q5T1M5 1219 aa13.25□□□□□ -0.29
SMARCE1-218ENST00000582955 SCD5Q86SK9 330 aa13.25□□□□□ -0.29
SMARCE1-218ENST00000582955 TADA2BQ86TJ2 420 aa13.25□□□□□ -0.29
SMARCE1-218ENST00000582955 ARHGAP18Q8N392 663 aa13.25□□□□□ -0.29
SMARCE1-218ENST00000582955 SHC3Q92529 594 aa13.25□□□□□ -0.29
SMARCE1-218ENST00000582955 ZFRQ96KR1 1074 aaKnown RBP13.25□□□□□ -0.29
SMARCE1-218ENST00000582955 LINC00597Q9H2U6 94 aa13.25□□□□□ -0.29
SMARCE1-218ENST00000582955 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.25□□□□□ -0.29
SMARCE1-218ENST00000582955 AJAP1Q9UKB5 411 aaPredicted RBP13.25□□□□□ -0.29
SMARCE1-218ENST00000582955 MIA3Q5JRA6 1907 aa13.25□□□□□ -0.29
SMARCE1-218ENST00000582955 OTOL1A6NHN0 477 aaPredicted RBP13.24□□□□□ -0.29
SMARCE1-218ENST00000582955 BECN2A8MW95 431 aa13.24□□□□□ -0.29
SMARCE1-218ENST00000582955 PIK3R2O00459 728 aa13.24□□□□□ -0.29
SMARCE1-218ENST00000582955 SLC9A3R1O14745 358 aaPredicted RBP13.24□□□□□ -0.29
SMARCE1-218ENST00000582955 MDM4O15151 490 aa13.24□□□□□ -0.29
SMARCE1-218ENST00000582955 NFATC1O95644 943 aa13.24□□□□□ -0.29
SMARCE1-218ENST00000582955 COPB1P53618 953 aaKnown RBP13.24□□□□□ -0.29
SMARCE1-218ENST00000582955 PTPN5P54829 565 aa13.24□□□□□ -0.29
SMARCE1-218ENST00000582955 YWHAGP61981 247 aaKnown RBP eCLIP13.24□□□□□ -0.29
SMARCE1-218ENST00000582955 AMPD2Q01433 879 aa13.24□□□□□ -0.29
SMARCE1-218ENST00000582955 GOLGA8FQ08AF8 430 aa13.24□□□□□ -0.29
SMARCE1-218ENST00000582955 GOLGA8DPQ0D2H9 430 aa13.24□□□□□ -0.29
SMARCE1-218ENST00000582955 PON2Q15165 354 aa13.24□□□□□ -0.29
SMARCE1-218ENST00000582955 EML3Q32P44 896 aa13.24□□□□□ -0.29
SMARCE1-218ENST00000582955 TXNDC11Q6PKC3 985 aa13.24□□□□□ -0.29
SMARCE1-218ENST00000582955 RSRC2Q7L4I2 434 aaKnown RBP13.24□□□□□ -0.29
SMARCE1-218ENST00000582955 SLC35F5Q8WV83 523 aa13.24□□□□□ -0.29
SMARCE1-218ENST00000582955 KCTD13Q8WZ19 329 aa13.24□□□□□ -0.29
SMARCE1-218ENST00000582955 NDRG1Q92597 394 aaKnown RBP13.24□□□□□ -0.29
SMARCE1-218ENST00000582955 CDK5RAP1Q96SZ6 601 aaKnown RBP13.24□□□□□ -0.29
SMARCE1-218ENST00000582955 ECT2Q9H8V3 914 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms