RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 CRTAC1Q9NQ79 661 aa16.98■□□□□ 0.31
VAPA-204ENST00000577901 RAB20Q9NX57 234 aa16.98■□□□□ 0.31
VAPA-204ENST00000577901 RWDD2AQ9UIY3 292 aa16.98■□□□□ 0.31
VAPA-204ENST00000577901 ARHGAP26Q9UNA1 814 aa16.98■□□□□ 0.31
VAPA-204ENST00000577901 CHD8Q9HCK8 2581 aa16.98■□□□□ 0.31
VAPA-204ENST00000577901 ZNF638Q14966 1978 aaKnown RBP16.97■□□□□ 0.31
VAPA-204ENST00000577901 TCF3P15923 654 aa16.97■□□□□ 0.31
VAPA-204ENST00000577901 PDE6CP51160 858 aa16.97■□□□□ 0.31
VAPA-204ENST00000577901 DGKEP52429 567 aa16.97■□□□□ 0.31
VAPA-204ENST00000577901 NOP14P78316 857 aaKnown RBP16.97■□□□□ 0.31
VAPA-204ENST00000577901 CREB5Q02930 508 aa16.97■□□□□ 0.31
VAPA-204ENST00000577901 MDH1BQ5I0G3 518 aa16.97■□□□□ 0.31
VAPA-204ENST00000577901 RNF43Q68DV7 783 aa16.97■□□□□ 0.31
VAPA-204ENST00000577901 VSTM1Q6UX27 236 aa16.97■□□□□ 0.31
VAPA-204ENST00000577901 UNC93AQ86WB7 457 aa16.97■□□□□ 0.31
VAPA-204ENST00000577901 B3GALNT2Q8NCR0 500 aa16.97■□□□□ 0.31
VAPA-204ENST00000577901 CCDC26Q8TAB7 109 aa16.97■□□□□ 0.31
VAPA-204ENST00000577901 MYLPFQ96A32 169 aa16.97■□□□□ 0.31
VAPA-204ENST00000577901 PCED1BQ96HM7 432 aa16.97■□□□□ 0.31
VAPA-204ENST00000577901 SPATA17Q96L03 361 aa16.97■□□□□ 0.31
VAPA-204ENST00000577901 SRRTQ9BXP5 876 aaKnown RBP16.97■□□□□ 0.31
VAPA-204ENST00000577901 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.97■□□□□ 0.312e-7■■■■□ 25.2
VAPA-204ENST00000577901 DACH1Q9UI36 760 aa16.97■□□□□ 0.31
VAPA-204ENST00000577901 CFAP47Q6ZTR5 3102 aa16.96■□□□□ 0.31
VAPA-204ENST00000577901 KCNK5O95279 499 aa16.96■□□□□ 0.31
VAPA-204ENST00000577901 NFATC1O95644 943 aa16.96■□□□□ 0.31
VAPA-204ENST00000577901 CAVIN2O95810 425 aa16.96■□□□□ 0.31
VAPA-204ENST00000577901 BDNFP23560 247 aa16.96■□□□□ 0.31
VAPA-204ENST00000577901 GBP1P32455 592 aa16.96■□□□□ 0.31
VAPA-204ENST00000577901 GRIK1P39086 918 aa16.96■□□□□ 0.31
VAPA-204ENST00000577901 ASPAP45381 313 aa16.96■□□□□ 0.31
VAPA-204ENST00000577901 SHC2P98077 582 aa16.96■□□□□ 0.31
VAPA-204ENST00000577901 CETN1Q12798 172 aa16.96■□□□□ 0.31
VAPA-204ENST00000577901 CBWD6Q4V339 395 aa16.96■□□□□ 0.31
VAPA-204ENST00000577901 CBWD3Q5JTY5 395 aa16.96■□□□□ 0.31
VAPA-204ENST00000577901 CBWD5Q5RIA9 395 aa16.96■□□□□ 0.31
VAPA-204ENST00000577901 TSTD1Q8NFU3 115 aa16.96■□□□□ 0.31
VAPA-204ENST00000577901 GPT2Q8TD30 523 aa16.96■□□□□ 0.31
VAPA-204ENST00000577901 SLC35C1Q96A29 364 aa16.96■□□□□ 0.31
VAPA-204ENST00000577901 CEP295NLQ96MC4 621 aa16.96■□□□□ 0.31
VAPA-204ENST00000577901 EDEM2Q9BV94 578 aa16.96■□□□□ 0.31
VAPA-204ENST00000577901 NIF3L1Q9GZT8 377 aa16.96■□□□□ 0.31
VAPA-204ENST00000577901 SDCBP2Q9H190 292 aa16.96■□□□□ 0.31
VAPA-204ENST00000577901 DPEP3Q9H4B8 488 aa16.96■□□□□ 0.31
VAPA-204ENST00000577901 APOBEC3GQ9HC16 384 aaKnown RBP16.96■□□□□ 0.31
VAPA-204ENST00000577901 INVSQ9Y283 1065 aa16.96■□□□□ 0.31
VAPA-204ENST00000577901 NME7Q9Y5B8 376 aa16.96■□□□□ 0.31
VAPA-204ENST00000577901 EML5Q05BV3 1969 aa16.96■□□□□ 0.31
VAPA-204ENST00000577901 BCLAF3A2AJT9 711 aaKnown RBP16.95■□□□□ 0.3
VAPA-204ENST00000577901 K7EQS6 105 aa16.95■□□□□ 0.3
VAPA-204ENST00000577901 LEFTY2O00292 366 aa16.95■□□□□ 0.3
VAPA-204ENST00000577901 TRIM66O15016 1216 aa16.95■□□□□ 0.3
VAPA-204ENST00000577901 MBD3O95983 291 aa16.95■□□□□ 0.3
VAPA-204ENST00000577901 PFKLP17858 780 aa16.95■□□□□ 0.3
VAPA-204ENST00000577901 ANXA13P27216 316 aa16.95■□□□□ 0.3
VAPA-204ENST00000577901 OPRD1P41143 372 aa16.95■□□□□ 0.3
VAPA-204ENST00000577901 NDST1P52848 882 aa16.95■□□□□ 0.3
VAPA-204ENST00000577901 SEC13P55735 322 aa16.95■□□□□ 0.3
VAPA-204ENST00000577901 ZXDBP98169 803 aa16.95■□□□□ 0.3
VAPA-204ENST00000577901 C2orf27AQ580R0 203 aa16.95■□□□□ 0.3
VAPA-204ENST00000577901 PSAPL1Q6NUJ1 521 aa16.95■□□□□ 0.3
VAPA-204ENST00000577901 DENND5BQ6ZUT9 1274 aa16.95■□□□□ 0.3
VAPA-204ENST00000577901 C11orf74Q86VG3 221 aa16.95■□□□□ 0.3
VAPA-204ENST00000577901 TTC39CQ8N584 583 aa16.95■□□□□ 0.3
VAPA-204ENST00000577901 USP33Q8TEY7 942 aa16.95■□□□□ 0.3
VAPA-204ENST00000577901 SEMA4DQ92854 862 aa16.95■□□□□ 0.3
VAPA-204ENST00000577901 ELOVL4Q9GZR5 314 aa16.95■□□□□ 0.3
VAPA-204ENST00000577901 EHD2Q9NZN4 543 aa16.95■□□□□ 0.3
VAPA-204ENST00000577901 TRPM5Q9NZQ8 1165 aa16.95■□□□□ 0.3
VAPA-204ENST00000577901 COQ4Q9Y3A0 265 aa16.95■□□□□ 0.3
VAPA-204ENST00000577901 ATP8B3O60423 1300 aa16.95■□□□□ 0.3
VAPA-204ENST00000577901 MAP1BP46821 2468 aaKnown RBP16.94■□□□□ 0.3
VAPA-204ENST00000577901 FMO5P49326 533 aa16.94■□□□□ 0.3
VAPA-204ENST00000577901 MARSP56192 900 aaKnown RBP16.94■□□□□ 0.3
VAPA-204ENST00000577901 USP46P62068 366 aa16.94■□□□□ 0.3
VAPA-204ENST00000577901 TPD52L1Q16890 204 aaPredicted RBP16.94■□□□□ 0.3
VAPA-204ENST00000577901 USP39Q53GS9 565 aaKnown RBP16.94■□□□□ 0.3
VAPA-204ENST00000577901 ACOT1Q86TX2 421 aa16.94■□□□□ 0.3
VAPA-204ENST00000577901 CRYBG2Q8N1P7 616 aa16.94■□□□□ 0.3
VAPA-204ENST00000577901 MED10Q9BTT4 135 aa16.94■□□□□ 0.3
VAPA-204ENST00000577901 B3GNT5Q9BYG0 378 aa16.94■□□□□ 0.3
VAPA-204ENST00000577901 TPSD1Q9BZJ3 242 aa16.94■□□□□ 0.3
VAPA-204ENST00000577901 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.94■□□□□ 0.3
VAPA-204ENST00000577901 KIAA1549LQ6ZVL6 1849 aa16.93■□□□□ 0.3
VAPA-204ENST00000577901 ATG2BQ96BY7 2078 aa16.93■□□□□ 0.3
VAPA-204ENST00000577901 SPAG17Q6Q759 2223 aa16.93■□□□□ 0.3
VAPA-204ENST00000577901 USP24Q9UPU5 2620 aa16.93■□□□□ 0.3
VAPA-204ENST00000577901 ZNF840PA6NDX5 716 aa16.93■□□□□ 0.3
VAPA-204ENST00000577901 PMM2O15305 246 aa16.93■□□□□ 0.3
VAPA-204ENST00000577901 P4HA2O15460 535 aa16.93■□□□□ 0.3
VAPA-204ENST00000577901 CD58P19256 250 aa16.93■□□□□ 0.3
VAPA-204ENST00000577901 ERCC5P28715 1186 aaPredicted RBP16.93■□□□□ 0.3
VAPA-204ENST00000577901 INCA1Q0VD86 236 aa16.93■□□□□ 0.3
VAPA-204ENST00000577901 GAB4Q2WGN9 574 aa16.93■□□□□ 0.3
VAPA-204ENST00000577901 CT47A1Q5JQC4 288 aaPredicted RBP16.93■□□□□ 0.3
VAPA-204ENST00000577901 PMS2CLQ68D20 193 aa16.93■□□□□ 0.3
VAPA-204ENST00000577901 ANO7Q6IWH7 933 aa16.93■□□□□ 0.3
VAPA-204ENST00000577901 RASSF3Q86WH2 238 aa16.93■□□□□ 0.3
VAPA-204ENST00000577901 CREBRFQ8IUR6 639 aa16.93■□□□□ 0.3
VAPA-204ENST00000577901 CCDC33Q8N5R6 958 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms