RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 SECISBP2LQ93073 1101 aaKnown RBP20.34■□□□□ 0.85
SS18-208ENST00000577751 NAA15Q9BXJ9 866 aaKnown RBP20.34■□□□□ 0.85
SS18-208ENST00000577751 ACP6Q9NPH0 428 aa20.34■□□□□ 0.85
SS18-208ENST00000577751 PLCB1Q9NQ66 1216 aa20.34■□□□□ 0.85
SS18-208ENST00000577751 HPS4Q9NQG7 708 aa20.34■□□□□ 0.85
SS18-208ENST00000577751 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.34■□□□□ 0.85
SS18-208ENST00000577751 SMTNL1A8MU46 457 aa20.33■□□□□ 0.85
SS18-208ENST00000577751 FOXN3O00409 490 aaPredicted RBP20.33■□□□□ 0.85
SS18-208ENST00000577751 STK25O00506 426 aa20.33■□□□□ 0.85
SS18-208ENST00000577751 GABBR2O75899 941 aa20.33■□□□□ 0.85
SS18-208ENST00000577751 MBL2P11226 248 aaPredicted RBP20.33■□□□□ 0.85
SS18-208ENST00000577751 CD72P21854 359 aa20.33■□□□□ 0.85
SS18-208ENST00000577751 GPD2P43304 727 aa20.33■□□□□ 0.85
SS18-208ENST00000577751 ZNF165P49910 485 aa20.33■□□□□ 0.85
SS18-208ENST00000577751 NUBP1P53384 320 aa20.33■□□□□ 0.85
SS18-208ENST00000577751 PDGFRLQ15198 375 aa20.33■□□□□ 0.85
SS18-208ENST00000577751 TRIM68Q6AZZ1 485 aa20.33■□□□□ 0.85
SS18-208ENST00000577751 PMF1Q6P1K2 205 aa20.33■□□□□ 0.85
SS18-208ENST00000577751 KLHDC10Q6PID8 442 aa20.33■□□□□ 0.85
SS18-208ENST00000577751 ZNF852Q6ZMS4 543 aa20.33■□□□□ 0.85
SS18-208ENST00000577751 BHLHA9Q7RTU4 235 aa20.33■□□□□ 0.85
SS18-208ENST00000577751 ZNF687Q8N1G0 1237 aa20.33■□□□□ 0.85
SS18-208ENST00000577751 SCML4Q8N228 414 aa20.33■□□□□ 0.85
SS18-208ENST00000577751 PJA1Q8NG27 643 aa20.33■□□□□ 0.85
SS18-208ENST00000577751 OSCP1Q8WVF1 389 aa20.33■□□□□ 0.85
SS18-208ENST00000577751 MSANTD3Q96H12 275 aa20.33■□□□□ 0.85
SS18-208ENST00000577751 NELL2Q99435 816 aa20.33■□□□□ 0.85
SS18-208ENST00000577751 OSBPL6Q9BZF3 934 aa20.33■□□□□ 0.85
SS18-208ENST00000577751 FOXQ1Q9C009 403 aa20.33■□□□□ 0.85
SS18-208ENST00000577751 C8orf33Q9H7E9 229 aaPredicted RBP20.33■□□□□ 0.85
SS18-208ENST00000577751 CLIC5Q9NZA1 410 aa20.33■□□□□ 0.85
SS18-208ENST00000577751 SIT1Q9Y3P8 196 aa20.33■□□□□ 0.85
SS18-208ENST00000577751 PIAS3Q9Y6X2 628 aa20.33■□□□□ 0.85
SS18-208ENST00000577751 MIA3Q5JRA6 1907 aa20.33■□□□□ 0.84
SS18-208ENST00000577751 OTOL1A6NHN0 477 aaPredicted RBP20.32■□□□□ 0.84
SS18-208ENST00000577751 M0QYV0 167 aa20.32■□□□□ 0.84
SS18-208ENST00000577751 MAN2B1O00754 1011 aa20.32■□□□□ 0.84
SS18-208ENST00000577751 MED7O43513 233 aa20.32■□□□□ 0.84
SS18-208ENST00000577751 ZBED1O96006 694 aa20.32■□□□□ 0.84
SS18-208ENST00000577751 RARGP13631 454 aa20.32■□□□□ 0.84
SS18-208ENST00000577751 UCHL3P15374 230 aa20.32■□□□□ 0.84
SS18-208ENST00000577751 CDK11BP21127 795 aaKnown RBP20.32■□□□□ 0.84
SS18-208ENST00000577751 RFX1P22670 979 aa20.32■□□□□ 0.84
SS18-208ENST00000577751 GNA15P30679 374 aa20.32■□□□□ 0.84
SS18-208ENST00000577751 RPL34P49207 117 aaKnown RBP20.32■□□□□ 0.84
SS18-208ENST00000577751 RUNX3Q13761 415 aa20.32■□□□□ 0.84
SS18-208ENST00000577751 IQCB1Q15051 598 aa20.32■□□□□ 0.84
SS18-208ENST00000577751 ITPRIPL2Q3MIP1 535 aa20.32■□□□□ 0.84
SS18-208ENST00000577751 DDX42Q86XP3 938 aaKnown RBP eCLIP20.32■□□□□ 0.84
SS18-208ENST00000577751 FAM71AQ8IYT1 594 aa20.32■□□□□ 0.84
SS18-208ENST00000577751 HSFY1Q96LI6 401 aa20.32■□□□□ 0.84
SS18-208ENST00000577751 LSM14BQ9BX40 385 aaKnown RBP20.32■□□□□ 0.84
SS18-208ENST00000577751 ULBP1Q9BZM6 244 aa20.32■□□□□ 0.84
SS18-208ENST00000577751 KCNH6Q9H252 994 aa20.32■□□□□ 0.84
SS18-208ENST00000577751 EBF3Q9H4W6 596 aa20.32■□□□□ 0.84
SS18-208ENST00000577751 LRRC4Q9HBW1 653 aa20.32■□□□□ 0.84
SS18-208ENST00000577751 LTB4R2Q9NPC1 389 aa20.32■□□□□ 0.84
SS18-208ENST00000577751 DUS2Q9NX74 493 aaKnown RBP20.32■□□□□ 0.84
SS18-208ENST00000577751 SMPD4Q9NXE4 827 aa20.32■□□□□ 0.84
SS18-208ENST00000577751 DLGAP2Q9P1A6 1054 aa20.32■□□□□ 0.84
SS18-208ENST00000577751 NAGPAQ9UK23 515 aa20.32■□□□□ 0.84
SS18-208ENST00000577751 MTF2Q9Y483 593 aaPredicted RBP20.32■□□□□ 0.84
SS18-208ENST00000577751 FHOD1Q9Y613 1164 aa20.32■□□□□ 0.84
SS18-208ENST00000577751 LGALS16A8MUM7 142 aa20.31■□□□□ 0.84
SS18-208ENST00000577751 TBX18O95935 607 aa20.31■□□□□ 0.84
SS18-208ENST00000577751 ATP1A3P13637 1013 aa20.31■□□□□ 0.84
SS18-208ENST00000577751 CLCN1P35523 988 aa20.31■□□□□ 0.84
SS18-208ENST00000577751 ATP5C1P36542 298 aaKnown RBP20.31■□□□□ 0.84
SS18-208ENST00000577751 USP8P40818 1118 aa20.31■□□□□ 0.84
SS18-208ENST00000577751 KPNA1P52294 538 aaPredicted RBP20.31■□□□□ 0.84
SS18-208ENST00000577751 ADIGQ0VDE8 80 aa20.31■□□□□ 0.84
SS18-208ENST00000577751 FZD5Q13467 585 aa20.31■□□□□ 0.84
SS18-208ENST00000577751 DRAP1Q14919 205 aaPredicted RBP20.31■□□□□ 0.84
SS18-208ENST00000577751 EML3Q32P44 896 aa20.31■□□□□ 0.84
SS18-208ENST00000577751 FKBP15Q5T1M5 1219 aa20.31■□□□□ 0.84
SS18-208ENST00000577751 C1orf228Q6PIY5 440 aa20.31■□□□□ 0.84
SS18-208ENST00000577751 RALGPS2Q86X27 583 aaPredicted RBP20.31■□□□□ 0.84
SS18-208ENST00000577751 ARHGAP18Q8N392 663 aa20.31■□□□□ 0.84
SS18-208ENST00000577751 FAM3CQ92520 227 aa20.31■□□□□ 0.84
SS18-208ENST00000577751 KLF16Q9BXK1 252 aaPredicted RBP20.31■□□□□ 0.84
SS18-208ENST00000577751 GANQ9H2C0 597 aa20.31■□□□□ 0.84
SS18-208ENST00000577751 CNGB3Q9NQW8 809 aa20.31■□□□□ 0.84
SS18-208ENST00000577751 SIK3Q9Y2K2 1263 aa20.31■□□□□ 0.84
SS18-208ENST00000577751 HCN4Q9Y3Q4 1203 aa20.31■□□□□ 0.84
SS18-208ENST00000577751 WNT6Q9Y6F9 365 aa20.31■□□□□ 0.84
SS18-208ENST00000577751 F5P12259 2224 aa20.3■□□□□ 0.84
SS18-208ENST00000577751 E2F8A0AVK6 867 aa20.3■□□□□ 0.84
SS18-208ENST00000577751 FAM170BA6NMN3 283 aa20.3■□□□□ 0.84
SS18-208ENST00000577751 SPECC1L-ADORA2AF8WAN1 911 aa20.3■□□□□ 0.84
SS18-208ENST00000577751 THAP12O43422 761 aa20.3■□□□□ 0.84
SS18-208ENST00000577751 ARSAP15289 507 aa20.3■□□□□ 0.84
SS18-208ENST00000577751 TARSP26639 723 aaKnown RBP20.3■□□□□ 0.84
SS18-208ENST00000577751 CTHP32929 405 aa20.3■□□□□ 0.84
SS18-208ENST00000577751 SOX9P48436 509 aa20.3■□□□□ 0.84
SS18-208ENST00000577751 YWHAGP61981 247 aaKnown RBP eCLIP20.3■□□□□ 0.84
SS18-208ENST00000577751 PTK2Q05397 1052 aa20.3■□□□□ 0.84
SS18-208ENST00000577751 DENND1BQ6P3S1 775 aa20.3■□□□□ 0.84
SS18-208ENST00000577751 CCDC105Q8IYK2 499 aa20.3■□□□□ 0.84
SS18-208ENST00000577751 TTC16Q8NEE8 873 aa20.3■□□□□ 0.84
SS18-208ENST00000577751 TTC8Q8TAM2 541 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms