RNA–Protein interactions for RNA: ENST00000575431.1

CCDC40-214, Transcript of coiled-coil domain containing 40, humanhuman

TSL 3

Gene CCDC40, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-214ENST00000575431 IRF7Q92985 503 aa10.05□□□□□ -0.8
CCDC40-214ENST00000575431 ULBP1Q9BZM6 244 aa10.05□□□□□ -0.8
CCDC40-214ENST00000575431 TRPC7Q9HCX4 862 aa10.05□□□□□ -0.8
CCDC40-214ENST00000575431 ACP6Q9NPH0 428 aa10.05□□□□□ -0.8
CCDC40-214ENST00000575431 TRPV5Q9NQA5 729 aa10.05□□□□□ -0.8
CCDC40-214ENST00000575431 ST7Q9NRC1 585 aa10.05□□□□□ -0.8
CCDC40-214ENST00000575431 ABCC13Q9NSE7 274 aa10.05□□□□□ -0.8
CCDC40-214ENST00000575431 OLA1Q9NTK5 396 aaKnown RBP10.05□□□□□ -0.8
CCDC40-214ENST00000575431 GMIPQ9P107 970 aa10.05□□□□□ -0.8
CCDC40-214ENST00000575431 WNT16Q9UBV4 365 aa10.05□□□□□ -0.8
CCDC40-214ENST00000575431 DUSP12Q9UNI6 340 aa10.05□□□□□ -0.8
CCDC40-214ENST00000575431 ANAPC1Q9H1A4 1944 aa10.05□□□□□ -0.8
CCDC40-214ENST00000575431 C2orf78A6NCI8 922 aa10.04□□□□□ -0.8
CCDC40-214ENST00000575431 TULP2O00295 520 aa10.04□□□□□ -0.8
CCDC40-214ENST00000575431 NRG2O14511 850 aaPredicted RBP10.04□□□□□ -0.8
CCDC40-214ENST00000575431 ZNF263O14978 683 aa10.04□□□□□ -0.8
CCDC40-214ENST00000575431 CHADO15335 359 aa10.04□□□□□ -0.8
CCDC40-214ENST00000575431 GLI1P08151 1106 aa10.04□□□□□ -0.8
CCDC40-214ENST00000575431 TPM1P09493 284 aa10.04□□□□□ -0.8
CCDC40-214ENST00000575431 PNMA6AP0CW24 399 aaPredicted RBP10.04□□□□□ -0.8
CCDC40-214ENST00000575431 MBL2P11226 248 aaPredicted RBP10.04□□□□□ -0.8
CCDC40-214ENST00000575431 RARGP13631 454 aa10.04□□□□□ -0.8
CCDC40-214ENST00000575431 LCP1P13796 627 aa10.04□□□□□ -0.8
CCDC40-214ENST00000575431 VIPR2P41587 438 aa10.04□□□□□ -0.8
CCDC40-214ENST00000575431 MLLT6P55198 1093 aaPredicted RBP10.04□□□□□ -0.8
CCDC40-214ENST00000575431 DAOAP59103 153 aa10.04□□□□□ -0.8
CCDC40-214ENST00000575431 YWHAGP61981 247 aaKnown RBP eCLIP10.04□□□□□ -0.8
CCDC40-214ENST00000575431 ZXDAP98168 799 aa10.04□□□□□ -0.8
CCDC40-214ENST00000575431 PDCLQ13371 301 aa10.04□□□□□ -0.8
CCDC40-214ENST00000575431 SFMBT2Q5VUG0 894 aa10.04□□□□□ -0.8
CCDC40-214ENST00000575431 SPECC1LQ69YQ0 1117 aa10.04□□□□□ -0.8
CCDC40-214ENST00000575431 POTEHQ6S545 545 aa10.04□□□□□ -0.8
CCDC40-214ENST00000575431 VITQ6UXI7 678 aa10.04□□□□□ -0.8
CCDC40-214ENST00000575431 BEND5Q7L4P6 421 aa10.04□□□□□ -0.8
CCDC40-214ENST00000575431 NOP9Q86U38 636 aaKnown RBP10.04□□□□□ -0.8
CCDC40-214ENST00000575431 WDTC1Q8N5D0 677 aa10.04□□□□□ -0.8
CCDC40-214ENST00000575431 RSAD2Q8WXG1 361 aa10.04□□□□□ -0.8
CCDC40-214ENST00000575431 DDX1Q92499 740 aaKnown RBP10.04□□□□□ -0.8
CCDC40-214ENST00000575431 BAP1Q92560 729 aa10.04□□□□□ -0.8
CCDC40-214ENST00000575431 SYN2Q92777 582 aaPredicted RBP10.04□□□□□ -0.8
CCDC40-214ENST00000575431 DNASE1L2Q92874 299 aa10.04□□□□□ -0.8
CCDC40-214ENST00000575431 USP13Q92995 863 aaPredicted RBP10.04□□□□□ -0.8
CCDC40-214ENST00000575431 PPP1R13BQ96KQ4 1090 aa10.04□□□□□ -0.8
CCDC40-214ENST00000575431 CYP2S1Q96SQ9 504 aa10.04□□□□□ -0.8
CCDC40-214ENST00000575431 KXD1Q9BQD3 176 aa10.04□□□□□ -0.8
CCDC40-214ENST00000575431 TTYH3Q9C0H2 523 aa10.04□□□□□ -0.8
CCDC40-214ENST00000575431 BRD9Q9H8M2 597 aa10.04□□□□□ -0.8
CCDC40-214ENST00000575431 NMUR1Q9HB89 426 aa10.04□□□□□ -0.8
CCDC40-214ENST00000575431 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.04□□□□□ -0.8
CCDC40-214ENST00000575431 AIPL1Q9NZN9 384 aa10.04□□□□□ -0.8
CCDC40-214ENST00000575431 MUTYHQ9UIF7 546 aa10.04□□□□□ -0.8
CCDC40-214ENST00000575431 DNMT3LQ9UJW3 386 aa10.04□□□□□ -0.8
CCDC40-214ENST00000575431 NAGPAQ9UK23 515 aa10.04□□□□□ -0.8
CCDC40-214ENST00000575431 NOCTQ9UK39 431 aaKnown RBP10.04□□□□□ -0.8
CCDC40-214ENST00000575431 BZW2Q9Y6E2 419 aaKnown RBP10.04□□□□□ -0.8
CCDC40-214ENST00000575431 MYO16Q9Y6X6 1858 aa10.04□□□□□ -0.8
CCDC40-214ENST00000575431 A0A1W2PQH9 124 aa10.03□□□□□ -0.8
CCDC40-214ENST00000575431 LRRC53A6NM62 1247 aa10.03□□□□□ -0.8
CCDC40-214ENST00000575431 DLL1O00548 723 aa10.03□□□□□ -0.8
CCDC40-214ENST00000575431 SLC9A3R1O14745 358 aaPredicted RBP10.03□□□□□ -0.8
CCDC40-214ENST00000575431 COCHO43405 550 aa10.03□□□□□ -0.8
CCDC40-214ENST00000575431 PRAMEF12O95522 483 aa10.03□□□□□ -0.8
CCDC40-214ENST00000575431 CALCAP01258 141 aa10.03□□□□□ -0.8
CCDC40-214ENST00000575431 CYP1A1P04798 512 aaPredicted RBP10.03□□□□□ -0.8
CCDC40-214ENST00000575431 PRKCIP41743 596 aa10.03□□□□□ -0.8
CCDC40-214ENST00000575431 RGS7P49802 495 aa10.03□□□□□ -0.8
CCDC40-214ENST00000575431 KPNA1P52294 538 aaPredicted RBP10.03□□□□□ -0.8
CCDC40-214ENST00000575431 GPC5P78333 572 aa10.03□□□□□ -0.8
CCDC40-214ENST00000575431 COG7P83436 770 aa10.03□□□□□ -0.8
CCDC40-214ENST00000575431 ZBED6P86452 979 aa10.03□□□□□ -0.8
CCDC40-214ENST00000575431 AMPD2Q01433 879 aa10.03□□□□□ -0.8
CCDC40-214ENST00000575431 SIGLEC14Q08ET2 396 aa10.03□□□□□ -0.8
CCDC40-214ENST00000575431 PDGFRLQ15198 375 aa10.03□□□□□ -0.8
CCDC40-214ENST00000575431 ASIC2Q16515 512 aa10.03□□□□□ -0.8
CCDC40-214ENST00000575431 EFHC1Q5JVL4 640 aa10.03□□□□□ -0.8
CCDC40-214ENST00000575431 BSPRYQ5W0U4 402 aa10.03□□□□□ -0.8
CCDC40-214ENST00000575431 C1orf228Q6PIY5 440 aa10.03□□□□□ -0.8
CCDC40-214ENST00000575431 TOGARAM2Q6ZUX3 1019 aa10.03□□□□□ -0.8
CCDC40-214ENST00000575431 RSRC2Q7L4I2 434 aaKnown RBP10.03□□□□□ -0.8
CCDC40-214ENST00000575431 SCD5Q86SK9 330 aa10.03□□□□□ -0.8
CCDC40-214ENST00000575431 ERICH1Q86X53 443 aa10.03□□□□□ -0.8
CCDC40-214ENST00000575431 SCUBE3Q8IX30 993 aa10.03□□□□□ -0.8
CCDC40-214ENST00000575431 C1orf131Q8NDD1 294 aaKnown RBP10.03□□□□□ -0.8
CCDC40-214ENST00000575431 RNF139Q8WU17 664 aa10.03□□□□□ -0.8
CCDC40-214ENST00000575431 C18orf8Q96DM3 657 aa10.03□□□□□ -0.8
CCDC40-214ENST00000575431 MSANTD3Q96H12 275 aa10.03□□□□□ -0.8
CCDC40-214ENST00000575431 RPP25Q9BUL9 199 aaKnown RBP10.03□□□□□ -0.8
CCDC40-214ENST00000575431 TRIM5Q9C035 493 aa10.03□□□□□ -0.8
CCDC40-214ENST00000575431 RNF38Q9H0F5 515 aa10.03□□□□□ -0.8
CCDC40-214ENST00000575431 RBSNQ9H1K0 784 aa10.03□□□□□ -0.8
CCDC40-214ENST00000575431 SYNCQ9H7C4 482 aa10.03□□□□□ -0.8
CCDC40-214ENST00000575431 CCSER2Q9H7U1 834 aa10.03□□□□□ -0.8
CCDC40-214ENST00000575431 TMEM51Q9NW97 253 aa10.03□□□□□ -0.8
CCDC40-214ENST00000575431 ASNSD1Q9NWL6 643 aa10.03□□□□□ -0.8
CCDC40-214ENST00000575431 TBC1D14Q9P2M4 693 aa10.03□□□□□ -0.8
CCDC40-214ENST00000575431 STRIP2Q9ULQ0 834 aa10.03□□□□□ -0.8
CCDC40-214ENST00000575431 CAPN11Q9UMQ6 739 aa10.03□□□□□ -0.8
CCDC40-214ENST00000575431 LUC7L2Q9Y383 392 aaKnown RBP10.03□□□□□ -0.8
CCDC40-214ENST00000575431 HELZP42694 1942 aaKnown RBP10.02□□□□□ -0.81
CCDC40-214ENST00000575431 E2F8A0AVK6 867 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms