RNA–Protein interactions for RNA: ENST00000575168.1

CXCL16-204, Transcript of C-X-C motif chemokine ligand 16, humanhuman

TSL 5

Gene CXCL16, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-204ENST00000575168 ZNF276Q8N554 614 aa13.05□□□□□ -0.32
CXCL16-204ENST00000575168 WDTC1Q8N5D0 677 aa13.05□□□□□ -0.32
CXCL16-204ENST00000575168 C12orf76Q8N812 135 aaPredicted RBP13.05□□□□□ -0.32
CXCL16-204ENST00000575168 SMRP1Q8NCR6 262 aa13.05□□□□□ -0.32
CXCL16-204ENST00000575168 SCAMP5Q8TAC9 235 aa13.05□□□□□ -0.32
CXCL16-204ENST00000575168 FAM149B1Q96BN6 582 aa13.05□□□□□ -0.32
CXCL16-204ENST00000575168 ZNF707Q96C28 371 aaPredicted RBP13.05□□□□□ -0.32
CXCL16-204ENST00000575168 MSLNLQ96KJ4 702 aa13.05□□□□□ -0.32
CXCL16-204ENST00000575168 CALR3Q96L12 384 aaKnown RBP13.05□□□□□ -0.32
CXCL16-204ENST00000575168 PCDHB18PQ96TA0 734 aa13.05□□□□□ -0.32
CXCL16-204ENST00000575168 EIF3CQ99613 913 aaKnown RBP13.05□□□□□ -0.32
CXCL16-204ENST00000575168 C11orf70Q9BRQ4 267 aa13.05□□□□□ -0.32
CXCL16-204ENST00000575168 SELENOOQ9BVL4 669 aa13.05□□□□□ -0.32
CXCL16-204ENST00000575168 ATXN3LQ9H3M9 355 aa13.05□□□□□ -0.32
CXCL16-204ENST00000575168 SLITRK6Q9H5Y7 841 aa13.05□□□□□ -0.32
CXCL16-204ENST00000575168 WDR6Q9NNW5 1121 aaKnown RBP13.05□□□□□ -0.32
CXCL16-204ENST00000575168 TMEM30AQ9NV96 361 aa13.05□□□□□ -0.32
CXCL16-204ENST00000575168 GDE1Q9NZC3 331 aa13.05□□□□□ -0.32
CXCL16-204ENST00000575168 CLEC1BQ9P126 229 aa13.05□□□□□ -0.32
CXCL16-204ENST00000575168 TULP2O00295 520 aa13.04□□□□□ -0.32
CXCL16-204ENST00000575168 LTFP02788 710 aa13.04□□□□□ -0.32
CXCL16-204ENST00000575168 PLEKP08567 350 aaPredicted RBP13.04□□□□□ -0.32
CXCL16-204ENST00000575168 CFHP08603 1231 aa13.04□□□□□ -0.32
CXCL16-204ENST00000575168 GBP1P32455 592 aa13.04□□□□□ -0.32
CXCL16-204ENST00000575168 MAGEA1P43355 309 aa13.04□□□□□ -0.32
CXCL16-204ENST00000575168 KPNA1P52294 538 aaPredicted RBP13.04□□□□□ -0.32
CXCL16-204ENST00000575168 GSCP56915 257 aaPredicted RBP13.04□□□□□ -0.32
CXCL16-204ENST00000575168 YWHAGP61981 247 aaKnown RBP eCLIP13.04□□□□□ -0.32
CXCL16-204ENST00000575168 MTMR3Q13615 1198 aa13.04□□□□□ -0.32
CXCL16-204ENST00000575168 CBX2Q14781 532 aaPredicted RBP13.04□□□□□ -0.32
CXCL16-204ENST00000575168 ASTE1Q2TB18 679 aaPredicted RBP13.04□□□□□ -0.32
CXCL16-204ENST00000575168 HECTD3Q5T447 861 aa13.04□□□□□ -0.32
CXCL16-204ENST00000575168 FAM102AQ5T9C2 384 aaPredicted RBP13.04□□□□□ -0.32
CXCL16-204ENST00000575168 SNX30Q5VWJ9 437 aa13.04□□□□□ -0.32
CXCL16-204ENST00000575168 DCUN1D2Q6PH85 259 aa13.04□□□□□ -0.32
CXCL16-204ENST00000575168 MON1BQ7L1V2 547 aa13.04□□□□□ -0.32
CXCL16-204ENST00000575168 SLC26A9Q7LBE3 791 aa13.04□□□□□ -0.32
CXCL16-204ENST00000575168 ARCQ7LC44 396 aa13.04□□□□□ -0.32
CXCL16-204ENST00000575168 OTOP3Q7RTS5 596 aa13.04□□□□□ -0.32
CXCL16-204ENST00000575168 C3orf20Q8ND61 904 aa13.04□□□□□ -0.32
CXCL16-204ENST00000575168 ZNF653Q96CK0 615 aa13.04□□□□□ -0.32
CXCL16-204ENST00000575168 ACSF2Q96CM8 615 aaPredicted RBP13.04□□□□□ -0.32
CXCL16-204ENST00000575168 PPP1R9BQ96SB3 815 aa13.04□□□□□ -0.32
CXCL16-204ENST00000575168 NCAPGQ9BPX3 1015 aa13.04□□□□□ -0.32
CXCL16-204ENST00000575168 S1PR5Q9H228 398 aa13.04□□□□□ -0.32
CXCL16-204ENST00000575168 POPDC2Q9HBU9 364 aa13.04□□□□□ -0.32
CXCL16-204ENST00000575168 DNMT3BQ9UBC3 853 aaKnown RBP13.04□□□□□ -0.32
CXCL16-204ENST00000575168 CYTH4Q9UIA0 394 aa13.04□□□□□ -0.32
CXCL16-204ENST00000575168 STAP1Q9ULZ2 295 aa13.04□□□□□ -0.32
CXCL16-204ENST00000575168 NR2E1Q9Y466 385 aa13.04□□□□□ -0.32
CXCL16-204ENST00000575168 PAXBP1Q9Y5B6 917 aa13.04□□□□□ -0.32
CXCL16-204ENST00000575168 TRAV19A0A0A6YYK7 116 aa13.03□□□□□ -0.32
CXCL16-204ENST00000575168 ZNF840PA6NDX5 716 aa13.03□□□□□ -0.32
CXCL16-204ENST00000575168 LCA5LO95447 670 aa13.03□□□□□ -0.32
CXCL16-204ENST00000575168 F11P03951 625 aa13.03□□□□□ -0.32
CXCL16-204ENST00000575168 ERBB2P04626 1255 aa13.03□□□□□ -0.32
CXCL16-204ENST00000575168 KRT3P12035 628 aa13.03□□□□□ -0.32
CXCL16-204ENST00000575168 ATP5C1P36542 298 aaKnown RBP13.03□□□□□ -0.32
CXCL16-204ENST00000575168 LTBRP36941 435 aa13.03□□□□□ -0.32
CXCL16-204ENST00000575168 AVPR1AP37288 418 aa13.03□□□□□ -0.32
CXCL16-204ENST00000575168 RBM10P98175 930 aaKnown RBP13.03□□□□□ -0.32
CXCL16-204ENST00000575168 GFPT1Q06210 699 aaPredicted RBP13.03□□□□□ -0.32
CXCL16-204ENST00000575168 MTA1Q13330 715 aa13.03□□□□□ -0.32
CXCL16-204ENST00000575168 LEXMQ3ZCV2 418 aa13.03□□□□□ -0.32
CXCL16-204ENST00000575168 BSPRYQ5W0U4 402 aa13.03□□□□□ -0.32
CXCL16-204ENST00000575168 KLHDC10Q6PID8 442 aa13.03□□□□□ -0.32
CXCL16-204ENST00000575168 FAM183BPQ6ZVS7 135 aa13.03□□□□□ -0.32
CXCL16-204ENST00000575168 SND1Q7KZF4 910 aaKnown RBP eCLIP13.03□□□□□ -0.32
CXCL16-204ENST00000575168 GPRIN1Q7Z2K8 1008 aa13.03□□□□□ -0.32
CXCL16-204ENST00000575168 KIAA1328Q86T90 577 aa13.03□□□□□ -0.32
CXCL16-204ENST00000575168 DDX42Q86XP3 938 aaKnown RBP eCLIP13.03□□□□□ -0.32
CXCL16-204ENST00000575168 XYLT1Q86Y38 959 aa13.03□□□□□ -0.32
CXCL16-204ENST00000575168 TMC8Q8IU68 726 aa13.03□□□□□ -0.32
CXCL16-204ENST00000575168 RHOT2Q8IXI1 618 aa13.03□□□□□ -0.32
CXCL16-204ENST00000575168 E2F7Q96AV8 911 aa13.03□□□□□ -0.32
CXCL16-204ENST00000575168 TASP1Q9H6P5 420 aa13.03□□□□□ -0.32
CXCL16-204ENST00000575168 GMIPQ9P107 970 aa13.03□□□□□ -0.32
CXCL16-204ENST00000575168 UVRAGQ9P2Y5 699 aa13.03□□□□□ -0.32
CXCL16-204ENST00000575168 CNOT8Q9UFF9 292 aaKnown RBP13.03□□□□□ -0.32
CXCL16-204ENST00000575168 CHORDC1Q9UHD1 332 aaPredicted RBP13.03□□□□□ -0.32
CXCL16-204ENST00000575168 USP15Q9Y4E8 981 aaPredicted RBP13.03□□□□□ -0.32
CXCL16-204ENST00000575168 DENND4CQ5VZ89 1909 aa13.03□□□□□ -0.32
CXCL16-204ENST00000575168 C2orf16Q68DN1 1984 aa13.03□□□□□ -0.32
CXCL16-204ENST00000575168 A0A1W2PRU2 124 aa13.02□□□□□ -0.33
CXCL16-204ENST00000575168 SIGLEC16A6NMB1 481 aa13.02□□□□□ -0.33
CXCL16-204ENST00000575168 GOLGA8SH3BPF8 625 aa13.02□□□□□ -0.33
CXCL16-204ENST00000575168 H3BQ06 376 aaPredicted RBP13.02□□□□□ -0.33
CXCL16-204ENST00000575168 PIK3R2O00459 728 aa13.02□□□□□ -0.33
CXCL16-204ENST00000575168 PAPSS1O43252 624 aaPredicted RBP13.02□□□□□ -0.33
CXCL16-204ENST00000575168 TLR5O60602 858 aa13.02□□□□□ -0.33
CXCL16-204ENST00000575168 TMEM253P0C7T8 217 aa13.02□□□□□ -0.33
CXCL16-204ENST00000575168 ZDHHC11BP0C7U3 371 aa13.02□□□□□ -0.33
CXCL16-204ENST00000575168 NCAM1P13591 858 aa13.02□□□□□ -0.33
CXCL16-204ENST00000575168 RARGP13631 454 aa13.02□□□□□ -0.33
CXCL16-204ENST00000575168 USP46P62068 366 aa13.02□□□□□ -0.33
CXCL16-204ENST00000575168 IFI16Q16666 785 aaKnown RBP13.02□□□□□ -0.33
CXCL16-204ENST00000575168 C10orf120Q5SQS8 335 aa13.02□□□□□ -0.33
CXCL16-204ENST00000575168 OLFML1Q6UWY5 402 aa13.02□□□□□ -0.33
CXCL16-204ENST00000575168 HS6ST3Q8IZP7 471 aa13.02□□□□□ -0.33
CXCL16-204ENST00000575168 PLCD3Q8N3E9 789 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms