RNA–Protein interactions for RNA: ENST00000571643.5

CDC27-213, Transcript of cell division cycle 27, human

TSL 3

Gene CDC27, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC27-213	ENST00000571643	FMNL3	Q8IVF7	1028 aa		4.26	□□□□□ -1.73
CDC27-213	ENST00000571643	SEMA6D	Q8NFY4	1073 aa		4.26	□□□□□ -1.73
CDC27-213	ENST00000571643	COG3	Q96JB2	828 aa		4.26	□□□□□ -1.73
CDC27-213	ENST00000571643	GTPBP4	Q9BZE4	634 aa	Known RBP	4.26	□□□□□ -1.73
CDC27-213	ENST00000571643	AASDHPPT	Q9NRN7	309 aa		4.26	□□□□□ -1.73
CDC27-213	ENST00000571643	PNMA8B	Q9ULN7	279 aa	Predicted RBP	4.26	□□□□□ -1.73
CDC27-213	ENST00000571643	G3BP2	Q9UN86	482 aa	Known RBP	4.26	□□□□□ -1.73
CDC27-213	ENST00000571643	ST3GAL5	Q9UNP4	418 aa		4.26	□□□□□ -1.73
CDC27-213	ENST00000571643	SHOC2	Q9UQ13	582 aa		4.26	□□□□□ -1.73
CDC27-213	ENST00000571643	STXBP5L	Q9Y2K9	1186 aa		4.26	□□□□□ -1.73
CDC27-213	ENST00000571643	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	4.26	□□□□□ -1.73
CDC27-213	ENST00000571643	PAXBP1	Q9Y5B6	917 aa		4.26	□□□□□ -1.73
CDC27-213	ENST00000571643	BLM	P54132	1417 aa	Predicted RBP	4.26	□□□□□ -1.73
CDC27-213	ENST00000571643	NRAP	Q86VF7	1730 aa		4.26	□□□□□ -1.73
CDC27-213	ENST00000571643	KIAA0232	Q92628	1395 aa		4.26	□□□□□ -1.73
CDC27-213	ENST00000571643	NPC1L1	Q9UHC9	1359 aa		4.26	□□□□□ -1.73
CDC27-213	ENST00000571643	SPATA31A5	Q5VU36	1347 aa		4.25	□□□□□ -1.73
CDC27-213	ENST00000571643	SPATA31A7	Q8IWB4	1347 aa		4.25	□□□□□ -1.73
CDC27-213	ENST00000571643	COL18A1	P39060	1754 aa		4.25	□□□□□ -1.73
CDC27-213	ENST00000571643	OVOS2	A0A0J9YW53	1432 aa		4.25	□□□□□ -1.73
CDC27-213	ENST00000571643	WIPF3	A6NGB9	483 aa		4.25	□□□□□ -1.73
CDC27-213	ENST00000571643	MANSC4	A6NHS7	340 aa	Predicted RBP	4.25	□□□□□ -1.73
CDC27-213	ENST00000571643	CCER2	I3L3R5	266 aa		4.25	□□□□□ -1.73
CDC27-213	ENST00000571643	FYB1	O15117	783 aa		4.25	□□□□□ -1.73
CDC27-213	ENST00000571643	ANP32C	O43423	234 aa		4.25	□□□□□ -1.73
CDC27-213	ENST00000571643	AHSG	P02765	367 aa		4.25	□□□□□ -1.73
CDC27-213	ENST00000571643	HNRNPC	P07910	306 aa	Known RBP eCLIP	4.25	□□□□□ -1.73
CDC27-213	ENST00000571643	HMGB2	P26583	209 aa	Known RBP	4.25	□□□□□ -1.73
CDC27-213	ENST00000571643	CERS1	P27544	350 aa		4.25	□□□□□ -1.73
CDC27-213	ENST00000571643	PXN	P49023	591 aa	Predicted RBP	4.25	□□□□□ -1.73
CDC27-213	ENST00000571643	SOX8	P57073	446 aa		4.25	□□□□□ -1.73
CDC27-213	ENST00000571643	GRM1	Q13255	1194 aa		4.25	□□□□□ -1.73
CDC27-213	ENST00000571643	MYBPC2	Q14324	1141 aa		4.25	□□□□□ -1.73
CDC27-213	ENST00000571643	PLS1	Q14651	629 aa		4.25	□□□□□ -1.73
CDC27-213	ENST00000571643	OVOS2	Q6IE36	1432 aa		4.25	□□□□□ -1.73
CDC27-213	ENST00000571643	TMEM108	Q6UXF1	575 aa		4.25	□□□□□ -1.73
CDC27-213	ENST00000571643	C11orf96	Q7Z7L8	435 aa		4.25	□□□□□ -1.73
CDC27-213	ENST00000571643	HPS3	Q969F9	1004 aa		4.25	□□□□□ -1.73
CDC27-213	ENST00000571643	C1GALT1C1	Q96EU7	318 aa		4.25	□□□□□ -1.73
CDC27-213	ENST00000571643	C8orf48	Q96LL4	319 aa		4.25	□□□□□ -1.73
CDC27-213	ENST00000571643	SLC46A1	Q96NT5	459 aa		4.25	□□□□□ -1.73
CDC27-213	ENST00000571643	NAP1L4	Q99733	375 aa	Known RBP	4.25	□□□□□ -1.73
CDC27-213	ENST00000571643	PTDSS2	Q9BVG9	487 aa		4.25	□□□□□ -1.73
CDC27-213	ENST00000571643	TCEAL9	Q9UHQ7	104 aa		4.25	□□□□□ -1.73
CDC27-213	ENST00000571643	PCDHA1	Q9Y5I3	950 aa		4.25	□□□□□ -1.73
CDC27-213	ENST00000571643	RPS6KL1	Q9Y6S9	549 aa		4.25	□□□□□ -1.73
CDC27-213	ENST00000571643	FAM208A	Q9UK61	1670 aa	Known RBP	4.25	□□□□□ -1.73
CDC27-213	ENST00000571643	NFAT5	O94916	1531 aa		4.25	□□□□□ -1.73
CDC27-213	ENST00000571643	RTL1	A6NKG5	1358 aa		4.25	□□□□□ -1.73
CDC27-213	ENST00000571643	CCDC7	Q96M83	1385 aa		4.25	□□□□□ -1.73
CDC27-213	ENST00000571643	SPATA31A1	Q5TZJ5	1347 aa		4.24	□□□□□ -1.73
CDC27-213	ENST00000571643	WDR17	Q8IZU2	1322 aa		4.24	□□□□□ -1.73
CDC27-213	ENST00000571643	CRB1	P82279	1406 aa		4.24	□□□□□ -1.73
CDC27-213	ENST00000571643	DNAJC9-AS1	A6NH13	148 aa		4.24	□□□□□ -1.73
CDC27-213	ENST00000571643	CGB1	A6NKQ9	187 aa		4.24	□□□□□ -1.73
CDC27-213	ENST00000571643	TARM1	B6A8C7	271 aa		4.24	□□□□□ -1.73
CDC27-213	ENST00000571643	QSOX1	O00391	747 aa		4.24	□□□□□ -1.73
CDC27-213	ENST00000571643	PLIN1	O60240	522 aa		4.24	□□□□□ -1.73
CDC27-213	ENST00000571643	TH	P07101	528 aa		4.24	□□□□□ -1.73
CDC27-213	ENST00000571643	CELA2A	P08217	269 aa		4.24	□□□□□ -1.73
CDC27-213	ENST00000571643	PDGFRB	P09619	1106 aa		4.24	□□□□□ -1.73
CDC27-213	ENST00000571643	PCSK6	P29122	969 aa		4.24	□□□□□ -1.73
CDC27-213	ENST00000571643	LRPAP1	P30533	357 aa		4.24	□□□□□ -1.73
CDC27-213	ENST00000571643	ABCG1	P45844	678 aa		4.24	□□□□□ -1.73
CDC27-213	ENST00000571643	TOB1	P50616	345 aa	Predicted RBP	4.24	□□□□□ -1.73
CDC27-213	ENST00000571643	WNT3	P56703	355 aa		4.24	□□□□□ -1.73
CDC27-213	ENST00000571643	KRTAP10-11	P60412	298 aa		4.24	□□□□□ -1.73
CDC27-213	ENST00000571643	EXOSC9	Q06265	439 aa	Known RBP	4.24	□□□□□ -1.73
CDC27-213	ENST00000571643	EIF2B5	Q13144	721 aa	Known RBP	4.24	□□□□□ -1.73
CDC27-213	ENST00000571643	E2F2	Q14209	437 aa		4.24	□□□□□ -1.73
CDC27-213	ENST00000571643	KHDC1L	Q5JSQ8	128 aa		4.24	□□□□□ -1.73
CDC27-213	ENST00000571643	ATAT1	Q5SQI0	421 aa		4.24	□□□□□ -1.73
CDC27-213	ENST00000571643	VPS53	Q5VIR6	699 aa		4.24	□□□□□ -1.73
CDC27-213	ENST00000571643	FAM43B	Q6ZT52	329 aa	Predicted RBP	4.24	□□□□□ -1.73
CDC27-213	ENST00000571643	SUGP2	Q8IX01	1082 aa	Known RBP eCLIP	4.24	□□□□□ -1.73
CDC27-213	ENST00000571643	TCP11L2	Q8N4U5	519 aa		4.24	□□□□□ -1.73
CDC27-213	ENST00000571643	JDP2	Q8WYK2	163 aa		4.24	□□□□□ -1.73
CDC27-213	ENST00000571643	IP6K1	Q92551	441 aa		4.24	□□□□□ -1.73
CDC27-213	ENST00000571643	C1QTNF7	Q9BXJ2	289 aa		4.24	□□□□□ -1.73
CDC27-213	ENST00000571643	TTYH3	Q9C0H2	523 aa		4.24	□□□□□ -1.73
CDC27-213	ENST00000571643	GLOD4	Q9HC38	313 aa		4.24	□□□□□ -1.73
CDC27-213	ENST00000571643	NMRK2	Q9NPI5	230 aa		4.24	□□□□□ -1.73
CDC27-213	ENST00000571643	FBXO9	Q9UK97	447 aa	Predicted RBP	4.24	□□□□□ -1.73
CDC27-213	ENST00000571643	ADAM21	Q9UKJ8	722 aa		4.24	□□□□□ -1.73
CDC27-213	ENST00000571643	MED16	Q9Y2X0	877 aa		4.24	□□□□□ -1.73
CDC27-213	ENST00000571643	MYOM1	P52179	1685 aa		4.24	□□□□□ -1.73
CDC27-213	ENST00000571643	CAMTA1	Q9Y6Y1	1673 aa		4.24	□□□□□ -1.73
CDC27-213	ENST00000571643	COL5A2	P05997	1499 aa	Predicted RBP	4.24	□□□□□ -1.73
CDC27-213	ENST00000571643	ANKRD26	Q9UPS8	1709 aa		4.24	□□□□□ -1.73
CDC27-213	ENST00000571643	AOX1	Q06278	1338 aa		4.23	□□□□□ -1.73
CDC27-213	ENST00000571643	GLI3	P10071	1580 aa		4.23	□□□□□ -1.73
CDC27-213	ENST00000571643	KIF20B	Q96Q89	1820 aa		4.23	□□□□□ -1.73
CDC27-213	ENST00000571643	BCL9	O00512	1426 aa		4.23	□□□□□ -1.73
CDC27-213	ENST00000571643	LTN1	O94822	1766 aa		4.23	□□□□□ -1.73
CDC27-213	ENST00000571643	MYO1C	O00159	1063 aa		4.23	□□□□□ -1.73
CDC27-213	ENST00000571643	PPM1D	O15297	605 aa		4.23	□□□□□ -1.73
CDC27-213	ENST00000571643	ABLIM3	O94929	683 aa		4.23	□□□□□ -1.73
CDC27-213	ENST00000571643	UNC5C	O95185	931 aa		4.23	□□□□□ -1.73
CDC27-213	ENST00000571643	GRP	P07492	148 aa		4.23	□□□□□ -1.73
CDC27-213	ENST00000571643	FAM163B	P0C2L3	166 aa		4.23	□□□□□ -1.73

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