RNA–Protein interactions for RNA: ENST00000570253.5

PKD1-240, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 603 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-240ENST00000570253 SPHK2Q9NRA0 654 aa22.33■■□□□ 1.17
PKD1-240ENST00000570253 FOXD4L1Q9NU39 408 aa22.33■■□□□ 1.17
PKD1-240ENST00000570253 FAM13BQ9NYF5 915 aa22.33■■□□□ 1.17
PKD1-240ENST00000570253 TFIP11Q9UBB9 837 aaKnown RBP22.33■■□□□ 1.17
PKD1-240ENST00000570253 LSM7Q9UK45 103 aaKnown RBP22.33■■□□□ 1.17
PKD1-240ENST00000570253 NME7Q9Y5B8 376 aa22.33■■□□□ 1.17
PKD1-240ENST00000570253 HOXC11O43248 304 aaPredicted RBP22.32■■□□□ 1.16
PKD1-240ENST00000570253 CFIP05156 583 aa22.32■■□□□ 1.16
PKD1-240ENST00000570253 IRF1P10914 325 aa22.32■■□□□ 1.16
PKD1-240ENST00000570253 KNOP1Q1ED39 458 aaKnown RBP22.32■■□□□ 1.16
PKD1-240ENST00000570253 EMC10Q5UCC4 262 aa22.32■■□□□ 1.16
PKD1-240ENST00000570253 SNX30Q5VWJ9 437 aa22.32■■□□□ 1.16
PKD1-240ENST00000570253 SCARA5Q6ZMJ2 495 aa22.32■■□□□ 1.16
PKD1-240ENST00000570253 KCNK16Q96T55 309 aa22.32■■□□□ 1.16
PKD1-240ENST00000570253 DUSP9Q99956 384 aaKnown RBP22.32■■□□□ 1.16
PKD1-240ENST00000570253 ADAM33Q9BZ11 813 aa22.32■■□□□ 1.16
PKD1-240ENST00000570253 SMYD3Q9H7B4 428 aa22.32■■□□□ 1.16
PKD1-240ENST00000570253 VRTNQ9H8Y1 702 aa22.32■■□□□ 1.16
PKD1-240ENST00000570253 MYOFQ9NZM1 2061 aa22.32■■□□□ 1.16
PKD1-240ENST00000570253 PVALEFA0A1B0GWK0 134 aa22.31■■□□□ 1.16
PKD1-240ENST00000570253 TULP3O75386 442 aa22.31■■□□□ 1.16
PKD1-240ENST00000570253 AP1G2O75843 785 aa22.31■■□□□ 1.16
PKD1-240ENST00000570253 HOXB2P14652 356 aa22.31■■□□□ 1.16
PKD1-240ENST00000570253 HNRNPLP14866 589 aaKnown RBP eCLIP22.31■■□□□ 1.16
PKD1-240ENST00000570253 RPL6Q02878 288 aaKnown RBP22.31■■□□□ 1.16
PKD1-240ENST00000570253 NCOA4Q13772 614 aa22.31■■□□□ 1.16
PKD1-240ENST00000570253 DUOXA1Q1HG43 343 aa22.31■■□□□ 1.16
PKD1-240ENST00000570253 GRAMD4Q6IC98 578 aa22.31■■□□□ 1.16
PKD1-240ENST00000570253 SLC23A3Q6PIS1 610 aa22.31■■□□□ 1.16
PKD1-240ENST00000570253 TERB1Q8NA31 727 aa22.31■■□□□ 1.16
PKD1-240ENST00000570253 DEFB124Q8NES8 71 aa22.31■■□□□ 1.16
PKD1-240ENST00000570253 DNAI2Q9GZS0 605 aa22.31■■□□□ 1.16
PKD1-240ENST00000570253 CCSER2Q9H7U1 834 aa22.31■■□□□ 1.16
PKD1-240ENST00000570253 SLC39A2Q9NP94 309 aa22.31■■□□□ 1.16
PKD1-240ENST00000570253 TLR8Q9NR97 1041 aaKnown RBP22.31■■□□□ 1.16
PKD1-240ENST00000570253 KRT82Q9NSB4 513 aa22.31■■□□□ 1.16
PKD1-240ENST00000570253 TMEM30AQ9NV96 361 aa22.31■■□□□ 1.16
PKD1-240ENST00000570253 PLXND1Q9Y4D7 1925 aa22.31■■□□□ 1.16
PKD1-240ENST00000570253 ANTXRLA6NF34 631 aa22.3■■□□□ 1.16
PKD1-240ENST00000570253 C1QTNF9BB2RNN3 333 aa22.3■■□□□ 1.16
PKD1-240ENST00000570253 POLR2DO15514 142 aaKnown RBP22.3■■□□□ 1.16
PKD1-240ENST00000570253 ZNF217O75362 1048 aa22.3■■□□□ 1.16
PKD1-240ENST00000570253 C1QTNF9P0C862 333 aa22.3■■□□□ 1.16
PKD1-240ENST00000570253 ENGP17813 658 aa22.3■■□□□ 1.16
PKD1-240ENST00000570253 NTSR1P30989 418 aa22.3■■□□□ 1.16
PKD1-240ENST00000570253 PTGER3P43115 390 aa22.3■■□□□ 1.16
PKD1-240ENST00000570253 GFPT1Q06210 699 aaPredicted RBP22.3■■□□□ 1.16
PKD1-240ENST00000570253 BMT2Q1RMZ1 405 aa22.3■■□□□ 1.16
PKD1-240ENST00000570253 MAP7D1Q3KQU3 841 aa22.3■■□□□ 1.16
PKD1-240ENST00000570253 SFTPA1Q8IWL2 248 aa22.3■■□□□ 1.16
PKD1-240ENST00000570253 BBS7Q8IWZ6 715 aa22.3■■□□□ 1.16
PKD1-240ENST00000570253 SCAMP5Q8TAC9 235 aa22.3■■□□□ 1.16
PKD1-240ENST00000570253 ZNF516Q92618 1163 aa22.3■■□□□ 1.16
PKD1-240ENST00000570253 XYLT2Q9H1B5 865 aa22.3■■□□□ 1.16
PKD1-240ENST00000570253 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.3■■□□□ 1.16
PKD1-240ENST00000570253 GMIPQ9P107 970 aa22.3■■□□□ 1.16
PKD1-240ENST00000570253 SLC6A14Q9UN76 642 aa22.3■■□□□ 1.16
PKD1-240ENST00000570253 MYH10P35580 1976 aa22.29■■□□□ 1.16
PKD1-240ENST00000570253 ADAM23O75077 832 aa22.29■■□□□ 1.16
PKD1-240ENST00000570253 CDH8P55286 799 aa22.29■■□□□ 1.16
PKD1-240ENST00000570253 MESP2Q0VG99 397 aa22.29■■□□□ 1.16
PKD1-240ENST00000570253 ETFBKMTQ8IXQ9 262 aa22.29■■□□□ 1.16
PKD1-240ENST00000570253 CEP57L1Q8IYX8 460 aa22.29■■□□□ 1.16
PKD1-240ENST00000570253 ZFRQ96KR1 1074 aaKnown RBP22.29■■□□□ 1.16
PKD1-240ENST00000570253 GTPBP2Q9BX10 602 aaKnown RBP22.29■■□□□ 1.16
PKD1-240ENST00000570253 BLZF1Q9H2G9 400 aa22.29■■□□□ 1.16
PKD1-240ENST00000570253 ZDHHC4Q9NPG8 344 aa22.29■■□□□ 1.16
PKD1-240ENST00000570253 DNAJC17Q9NVM6 304 aaKnown RBP22.29■■□□□ 1.16
PKD1-240ENST00000570253 WDR35Q9P2L0 1181 aa22.29■■□□□ 1.16
PKD1-240ENST00000570253 MBD1Q9UIS9 605 aaPredicted RBP22.29■■□□□ 1.16
PKD1-240ENST00000570253 ZMIZ1Q9ULJ6 1067 aa22.29■■□□□ 1.16
PKD1-240ENST00000570253 ATXN2Q99700 1313 aaKnown RBP22.29■■□□□ 1.16
PKD1-240ENST00000570253 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.28■■□□□ 1.16
PKD1-240ENST00000570253 K7ELQ4 463 aaPredicted RBP22.28■■□□□ 1.16
PKD1-240ENST00000570253 TLR5O60602 858 aa22.28■■□□□ 1.16
PKD1-240ENST00000570253 PDIA4P13667 645 aaKnown RBP22.28■■□□□ 1.16
PKD1-240ENST00000570253 SGSM1Q2NKQ1 1148 aa22.28■■□□□ 1.16
PKD1-240ENST00000570253 SHC4Q6S5L8 630 aa22.28■■□□□ 1.16
PKD1-240ENST00000570253 ACOT1Q86TX2 421 aa22.28■■□□□ 1.16
PKD1-240ENST00000570253 CHPFQ8IZ52 775 aa22.28■■□□□ 1.16
PKD1-240ENST00000570253 PHTF2Q8N3S3 785 aa22.28■■□□□ 1.16
PKD1-240ENST00000570253 IL37Q9NZH6 218 aa22.28■■□□□ 1.16
PKD1-240ENST00000570253 PILRBQ9UKJ0 227 aa22.28■■□□□ 1.16
PKD1-240ENST00000570253 MYO18AQ92614 2054 aaKnown RBP22.27■■□□□ 1.16
PKD1-240ENST00000570253 FAM92AA1XBS5 289 aa22.27■■□□□ 1.16
PKD1-240ENST00000570253 LRRIQ3A6PVS8 624 aaPredicted RBP22.27■■□□□ 1.16
PKD1-240ENST00000570253 NEDD8-MDP1E9PL57 170 aa22.27■■□□□ 1.16
PKD1-240ENST00000570253 OPHN1O60890 802 aa22.27■■□□□ 1.16
PKD1-240ENST00000570253 RPN1P04843 607 aaKnown RBP22.27■■□□□ 1.16
PKD1-240ENST00000570253 ZDHHC11BP0C7U3 371 aa22.27■■□□□ 1.16
PKD1-240ENST00000570253 ITPKAP23677 461 aa22.27■■□□□ 1.16
PKD1-240ENST00000570253 ATP5C1P36542 298 aaKnown RBP22.27■■□□□ 1.16
PKD1-240ENST00000570253 AFMP43652 599 aa22.27■■□□□ 1.16
PKD1-240ENST00000570253 CASP4P49662 377 aa22.27■■□□□ 1.16
PKD1-240ENST00000570253 EHHADHQ08426 723 aa22.27■■□□□ 1.16
PKD1-240ENST00000570253 UNC93AQ86WB7 457 aa22.27■■□□□ 1.16
PKD1-240ENST00000570253 TMEM25Q86YD3 366 aa22.27■■□□□ 1.16
PKD1-240ENST00000570253 PARD3BQ8TEW8 1205 aa22.27■■□□□ 1.16
PKD1-240ENST00000570253 TAF4BQ92750 862 aa22.27■■□□□ 1.16
PKD1-240ENST00000570253 SCNM1Q9BWG6 230 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms