RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 FUT11Q495W5 492 aa7.13□□□□□ -1.27
HERPUD1-217ENST00000569429 C3orf38Q5JPI3 329 aa7.13□□□□□ -1.27
HERPUD1-217ENST00000569429 PPP4R3AQ6IN85 833 aa7.13□□□□□ -1.27
HERPUD1-217ENST00000569429 ADAT2Q7Z6V5 191 aaKnown RBP7.13□□□□□ -1.27
HERPUD1-217ENST00000569429 RAB11FIP4Q86YS3 637 aa7.13□□□□□ -1.27
HERPUD1-217ENST00000569429 CEP120Q8N960 986 aa7.13□□□□□ -1.27
HERPUD1-217ENST00000569429 CCDC12Q8WUD4 166 aaPredicted RBP7.13□□□□□ -1.27
HERPUD1-217ENST00000569429 SNX19Q92543 992 aa7.13□□□□□ -1.27
HERPUD1-217ENST00000569429 HPS3Q969F9 1004 aa7.13□□□□□ -1.27
HERPUD1-217ENST00000569429 GRAMD1AQ96CP6 724 aa7.13□□□□□ -1.27
HERPUD1-217ENST00000569429 ERLEC1Q96DZ1 483 aa7.13□□□□□ -1.27
HERPUD1-217ENST00000569429 NACC1Q96RE7 527 aa7.13□□□□□ -1.27
HERPUD1-217ENST00000569429 ORAI3Q9BRQ5 295 aa7.13□□□□□ -1.27
HERPUD1-217ENST00000569429 FUCA2Q9BTY2 467 aa7.13□□□□□ -1.27
HERPUD1-217ENST00000569429 ACE2Q9BYF1 805 aaPredicted RBP7.13□□□□□ -1.27
HERPUD1-217ENST00000569429 TTC12Q9H892 705 aaPredicted RBP7.13□□□□□ -1.27
HERPUD1-217ENST00000569429 DIAPH3Q9NSV4 1193 aa7.13□□□□□ -1.27
HERPUD1-217ENST00000569429 VAV3Q9UKW4 847 aa7.13□□□□□ -1.27
HERPUD1-217ENST00000569429 TAF6LQ9Y6J9 622 aa7.13□□□□□ -1.27
HERPUD1-217ENST00000569429 ARHGEF17Q96PE2 2063 aaPredicted RBP7.13□□□□□ -1.27
HERPUD1-217ENST00000569429 C2orf78A6NCI8 922 aa7.12□□□□□ -1.27
HERPUD1-217ENST00000569429 TSPAN3O60637 253 aa7.12□□□□□ -1.27
HERPUD1-217ENST00000569429 TDP2O95551 362 aa7.12□□□□□ -1.27
HERPUD1-217ENST00000569429 RXRGP48443 463 aa7.12□□□□□ -1.27
HERPUD1-217ENST00000569429 C21orf59P57076 290 aa7.12□□□□□ -1.27
HERPUD1-217ENST00000569429 RPL10AP62906 217 aaKnown RBP7.12□□□□□ -1.27
HERPUD1-217ENST00000569429 RACK1P63244 317 aaKnown RBP7.12□□□□□ -1.27
HERPUD1-217ENST00000569429 STARD3Q14849 445 aa7.12□□□□□ -1.27
HERPUD1-217ENST00000569429 PFKFB3Q16875 520 aaPredicted RBP7.12□□□□□ -1.27
HERPUD1-217ENST00000569429 LY6G5CQ5SRR4 150 aa7.12□□□□□ -1.27
HERPUD1-217ENST00000569429 PRAMEF14Q5SWL7 426 aa7.12□□□□□ -1.27
HERPUD1-217ENST00000569429 ATF7IP2Q5U623 682 aa7.12□□□□□ -1.27
HERPUD1-217ENST00000569429 BTBD8Q5XKL5 378 aa7.12□□□□□ -1.27
HERPUD1-217ENST00000569429 MOXD1Q6UVY6 613 aa7.12□□□□□ -1.27
HERPUD1-217ENST00000569429 DSTYKQ6XUX3 929 aa7.12□□□□□ -1.27
HERPUD1-217ENST00000569429 LRRTM3Q86VH5 581 aa7.12□□□□□ -1.27
HERPUD1-217ENST00000569429 MICU3Q86XE3 530 aa7.12□□□□□ -1.27
HERPUD1-217ENST00000569429 TMPRSS6Q8IU80 811 aa7.12□□□□□ -1.27
HERPUD1-217ENST00000569429 FSIP1Q8NA03 581 aa7.12□□□□□ -1.27
HERPUD1-217ENST00000569429 BICD2Q8TD16 824 aa7.12□□□□□ -1.27
HERPUD1-217ENST00000569429 SKA1Q96BD8 255 aa7.12□□□□□ -1.27
HERPUD1-217ENST00000569429 BIRC7Q96CA5 298 aa7.12□□□□□ -1.27
HERPUD1-217ENST00000569429 SIPA1Q96FS4 1042 aa7.12□□□□□ -1.27
HERPUD1-217ENST00000569429 C6orf106Q9H6K1 298 aaPredicted RBP7.12□□□□□ -1.27
HERPUD1-217ENST00000569429 RPF1Q9H9Y2 349 aaKnown RBP7.12□□□□□ -1.27
HERPUD1-217ENST00000569429 ANKEF1Q9NU02 776 aa7.12□□□□□ -1.27
HERPUD1-217ENST00000569429 RGL1Q9NZL6 768 aa7.12□□□□□ -1.27
HERPUD1-217ENST00000569429 TNFSF13BQ9Y275 285 aa7.12□□□□□ -1.27
HERPUD1-217ENST00000569429 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.12□□□□□ -1.27
HERPUD1-217ENST00000569429 POLEQ07864 2286 aa7.12□□□□□ -1.27
HERPUD1-217ENST00000569429 WASH3PC4AMC7 463 aa7.11□□□□□ -1.27
HERPUD1-217ENST00000569429 CYP26A1O43174 497 aa7.11□□□□□ -1.27
HERPUD1-217ENST00000569429 MTSS1O43312 755 aa7.11□□□□□ -1.27
HERPUD1-217ENST00000569429 PRC1O43663 620 aa7.11□□□□□ -1.27
HERPUD1-217ENST00000569429 OPA1O60313 960 aa7.11□□□□□ -1.27
HERPUD1-217ENST00000569429 NOBOXO60393 691 aa7.11□□□□□ -1.27
HERPUD1-217ENST00000569429 LYPLA2O95372 231 aa7.11□□□□□ -1.27
HERPUD1-217ENST00000569429 CLDN1O95832 211 aa7.11□□□□□ -1.27
HERPUD1-217ENST00000569429 CYP11A1P05108 521 aa7.11□□□□□ -1.27
HERPUD1-217ENST00000569429 HOXB4P17483 251 aaPredicted RBP7.11□□□□□ -1.27
HERPUD1-217ENST00000569429 GRIK1P39086 918 aa7.11□□□□□ -1.27
HERPUD1-217ENST00000569429 ARRB1P49407 418 aaPredicted RBP7.11□□□□□ -1.27
HERPUD1-217ENST00000569429 GPR15P49685 360 aa7.11□□□□□ -1.27
HERPUD1-217ENST00000569429 RARRES1P49788 294 aa7.11□□□□□ -1.27
HERPUD1-217ENST00000569429 SLC7A9P82251 487 aa7.11□□□□□ -1.27
HERPUD1-217ENST00000569429 BNIP3Q12983 259 aa7.11□□□□□ -1.27
HERPUD1-217ENST00000569429 CTTNQ14247 550 aaKnown RBP7.11□□□□□ -1.27
HERPUD1-217ENST00000569429 ISXQ2M1V0 245 aa7.11□□□□□ -1.27
HERPUD1-217ENST00000569429 NT5DC1Q5TFE4 455 aa7.11□□□□□ -1.27
HERPUD1-217ENST00000569429 CAPRIN2Q6IMN6 1127 aaKnown RBP7.11□□□□□ -1.27
HERPUD1-217ENST00000569429 SLC34A3Q8N130 599 aa7.11□□□□□ -1.27
HERPUD1-217ENST00000569429 ARL14Q8N4G2 192 aa7.11□□□□□ -1.27
HERPUD1-217ENST00000569429 NAT16Q8N8M0 369 aa7.11□□□□□ -1.27
HERPUD1-217ENST00000569429 STKLD1Q8NE28 680 aa7.11□□□□□ -1.27
HERPUD1-217ENST00000569429 PRCCQ92733 491 aaPredicted RBP7.11□□□□□ -1.27
HERPUD1-217ENST00000569429 OTUB2Q96DC9 234 aa7.11□□□□□ -1.27
HERPUD1-217ENST00000569429 CDT1Q9H211 546 aa7.11□□□□□ -1.27
HERPUD1-217ENST00000569429 IL25Q9H293 177 aa7.11□□□□□ -1.27
HERPUD1-217ENST00000569429 SLKQ9H2G2 1235 aaPredicted RBP7.11□□□□□ -1.27
HERPUD1-217ENST00000569429 ABI2Q9NYB9 513 aaPredicted RBP7.11□□□□□ -1.27
HERPUD1-217ENST00000569429 DONSONQ9NYP3 566 aa7.11□□□□□ -1.27
HERPUD1-217ENST00000569429 TBC1D14Q9P2M4 693 aa7.11□□□□□ -1.27
HERPUD1-217ENST00000569429 TUBGCP4Q9UGJ1 667 aa7.11□□□□□ -1.27
HERPUD1-217ENST00000569429 ACSL6Q9UKU0 697 aa7.11□□□□□ -1.27
HERPUD1-217ENST00000569429 PCDHGA4Q9Y5G9 962 aa7.11□□□□□ -1.27
HERPUD1-217ENST00000569429 ACANP16112 2415 aa7.1□□□□□ -1.27
HERPUD1-217ENST00000569429 MYH11P35749 1972 aa7.1□□□□□ -1.27
HERPUD1-217ENST00000569429 DCHS2Q6V1P9 2916 aa7.1□□□□□ -1.27
HERPUD1-217ENST00000569429 PRRT4C9JH25 899 aa7.1□□□□□ -1.27
HERPUD1-217ENST00000569429 TRIM24O15164 1050 aa7.1□□□□□ -1.27
HERPUD1-217ENST00000569429 SEMA7AO75326 666 aa7.1□□□□□ -1.27
HERPUD1-217ENST00000569429 SLITRK3O94933 977 aa7.1□□□□□ -1.27
HERPUD1-217ENST00000569429 OLFM2O95897 454 aa7.1□□□□□ -1.27
HERPUD1-217ENST00000569429 GP1BAP07359 652 aa7.1□□□□□ -1.27
HERPUD1-217ENST00000569429 C7P10643 843 aa7.1□□□□□ -1.27
HERPUD1-217ENST00000569429 ACADMP11310 421 aa7.1□□□□□ -1.27
HERPUD1-217ENST00000569429 ODC1P11926 461 aa7.1□□□□□ -1.27
HERPUD1-217ENST00000569429 PAX3P23760 479 aa7.1□□□□□ -1.27
HERPUD1-217ENST00000569429 ACSL1P33121 698 aa7.1□□□□□ -1.27
HERPUD1-217ENST00000569429 MCM5P33992 734 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms