RNA–Protein interactions for RNA: ENST00000569263.1

CNOT1-217, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 304 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-217ENST00000569263 RALAP11233 206 aa13.71□□□□□ -0.21
CNOT1-217ENST00000569263 SKILP12757 684 aa13.71□□□□□ -0.21
CNOT1-217ENST00000569263 PFKLP17858 780 aa13.71□□□□□ -0.21
CNOT1-217ENST00000569263 HDCP19113 662 aa13.71□□□□□ -0.21
CNOT1-217ENST00000569263 TNFAIP3P21580 790 aa13.71□□□□□ -0.21
CNOT1-217ENST00000569263 NSFP46459 744 aaKnown RBP13.71□□□□□ -0.21
CNOT1-217ENST00000569263 RPL34P49207 117 aaKnown RBP13.71□□□□□ -0.21
CNOT1-217ENST00000569263 TUBP50607 506 aa13.71□□□□□ -0.21
CNOT1-217ENST00000569263 DAOAP59103 153 aa13.71□□□□□ -0.21
CNOT1-217ENST00000569263 SNX30Q5VWJ9 437 aa13.71□□□□□ -0.21
CNOT1-217ENST00000569263 BTBD8Q5XKL5 378 aa13.71□□□□□ -0.21
CNOT1-217ENST00000569263 PM20D1Q6GTS8 502 aa13.71□□□□□ -0.21
CNOT1-217ENST00000569263 TADA2BQ86TJ2 420 aa13.71□□□□□ -0.21
CNOT1-217ENST00000569263 VPS36Q86VN1 386 aa13.71□□□□□ -0.21
CNOT1-217ENST00000569263 ERICH1Q86X53 443 aa13.71□□□□□ -0.21
CNOT1-217ENST00000569263 CNGA4Q8IV77 575 aa13.71□□□□□ -0.21
CNOT1-217ENST00000569263 GJD3Q8N144 294 aa13.71□□□□□ -0.21
CNOT1-217ENST00000569263 SCML4Q8N228 414 aa13.71□□□□□ -0.21
CNOT1-217ENST00000569263 ARL14EPQ8N8R7 260 aaPredicted RBP13.71□□□□□ -0.21
CNOT1-217ENST00000569263 CPA5Q8WXQ8 436 aa13.71□□□□□ -0.21
CNOT1-217ENST00000569263 IRGQQ8WZA9 623 aa13.71□□□□□ -0.21
CNOT1-217ENST00000569263 ASB16Q96NS5 453 aa13.71□□□□□ -0.21
CNOT1-217ENST00000569263 NECAB3Q96P71 396 aaPredicted RBP13.71□□□□□ -0.21
CNOT1-217ENST00000569263 CPXM1Q96SM3 734 aa13.71□□□□□ -0.21
CNOT1-217ENST00000569263 CDK5RAP1Q96SZ6 601 aaKnown RBP13.71□□□□□ -0.21
CNOT1-217ENST00000569263 UHRF1Q96T88 793 aaPredicted RBP13.71□□□□□ -0.21
CNOT1-217ENST00000569263 CCSER2Q9H7U1 834 aa13.71□□□□□ -0.21
CNOT1-217ENST00000569263 NMUR1Q9HB89 426 aa13.71□□□□□ -0.21
CNOT1-217ENST00000569263 LIMD1Q9UGP4 676 aa13.71□□□□□ -0.21
CNOT1-217ENST00000569263 BZW2Q9Y6E2 419 aaKnown RBP13.71□□□□□ -0.21
CNOT1-217ENST00000569263 AKR1B15C9JRZ8 316 aaPredicted RBP13.7□□□□□ -0.22
CNOT1-217ENST00000569263 TLR5O60602 858 aa13.7□□□□□ -0.22
CNOT1-217ENST00000569263 GABBR2O75899 941 aa13.7□□□□□ -0.22
CNOT1-217ENST00000569263 ADCY5O95622 1261 aa13.7□□□□□ -0.22
CNOT1-217ENST00000569263 OAS1P00973 400 aaKnown RBP13.7□□□□□ -0.22
CNOT1-217ENST00000569263 ERBB2P04626 1255 aa13.7□□□□□ -0.22
CNOT1-217ENST00000569263 SERPING1P05155 500 aa13.7□□□□□ -0.22
CNOT1-217ENST00000569263 MBL2P11226 248 aaPredicted RBP13.7□□□□□ -0.22
CNOT1-217ENST00000569263 RARGP13631 454 aa13.7□□□□□ -0.22
CNOT1-217ENST00000569263 HTR4Q13639 388 aa13.7□□□□□ -0.22
CNOT1-217ENST00000569263 CLEC16AQ2KHT3 1053 aa13.7□□□□□ -0.22
CNOT1-217ENST00000569263 PTPN20Q4JDL3 420 aa13.7□□□□□ -0.22
CNOT1-217ENST00000569263 C10orf120Q5SQS8 335 aa13.7□□□□□ -0.22
CNOT1-217ENST00000569263 OR6B2Q6IFH4 312 aa13.7□□□□□ -0.22
CNOT1-217ENST00000569263 POTEHQ6S545 545 aa13.7□□□□□ -0.22
CNOT1-217ENST00000569263 PARM1Q6UWI2 310 aa13.7□□□□□ -0.22
CNOT1-217ENST00000569263 TOGARAM2Q6ZUX3 1019 aa13.7□□□□□ -0.22
CNOT1-217ENST00000569263 RSRC2Q7L4I2 434 aaKnown RBP13.7□□□□□ -0.22
CNOT1-217ENST00000569263 SCD5Q86SK9 330 aa13.7□□□□□ -0.22
CNOT1-217ENST00000569263 TMEM110Q86TL2 294 aa13.7□□□□□ -0.22
CNOT1-217ENST00000569263 ARID3BQ8IVW6 561 aaPredicted RBP13.7□□□□□ -0.22
CNOT1-217ENST00000569263 SCUBE3Q8IX30 993 aa13.7□□□□□ -0.22
CNOT1-217ENST00000569263 TTC16Q8NEE8 873 aa13.7□□□□□ -0.22
CNOT1-217ENST00000569263 ST13P5Q8NFI4 369 aaPredicted RBP13.7□□□□□ -0.22
CNOT1-217ENST00000569263 OR8K1Q8NGG5 319 aa13.7□□□□□ -0.22
CNOT1-217ENST00000569263 CLEC4CQ8WTT0 213 aa13.7□□□□□ -0.22
CNOT1-217ENST00000569263 NDRG1Q92597 394 aaKnown RBP13.7□□□□□ -0.22
CNOT1-217ENST00000569263 E2F7Q96AV8 911 aa13.7□□□□□ -0.22
CNOT1-217ENST00000569263 FAM149B1Q96BN6 582 aa13.7□□□□□ -0.22
CNOT1-217ENST00000569263 PCDHB18PQ96TA0 734 aa13.7□□□□□ -0.22
CNOT1-217ENST00000569263 KXD1Q9BQD3 176 aa13.7□□□□□ -0.22
CNOT1-217ENST00000569263 SMG9Q9H0W8 520 aaKnown RBP13.7□□□□□ -0.22
CNOT1-217ENST00000569263 KIF9Q9HAQ2 790 aa13.7□□□□□ -0.22
CNOT1-217ENST00000569263 ZFP14Q9HCL3 533 aa13.7□□□□□ -0.22
CNOT1-217ENST00000569263 ABHD10Q9NUJ1 306 aa13.7□□□□□ -0.22
CNOT1-217ENST00000569263 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.7□□□□□ -0.22
CNOT1-217ENST00000569263 CLIC5Q9NZA1 410 aa13.7□□□□□ -0.22
CNOT1-217ENST00000569263 IGSF9Q9P2J2 1179 aa13.7□□□□□ -0.22
CNOT1-217ENST00000569263 NUMBLQ9Y6R0 609 aa13.7□□□□□ -0.22
CNOT1-217ENST00000569263 YJEFN3A6XGL0 299 aa13.69□□□□□ -0.22
CNOT1-217ENST00000569263 GOLGA6L6A8MZA4 724 aa13.69□□□□□ -0.22
CNOT1-217ENST00000569263 E7ENQ6 273 aa13.69□□□□□ -0.22
CNOT1-217ENST00000569263 PAPSS1O43252 624 aaPredicted RBP13.69□□□□□ -0.22
CNOT1-217ENST00000569263 COCHO43405 550 aa13.69□□□□□ -0.22
CNOT1-217ENST00000569263 PRAMEF12O95522 483 aa13.69□□□□□ -0.22
CNOT1-217ENST00000569263 LTFP02788 710 aa13.69□□□□□ -0.22
CNOT1-217ENST00000569263 ASGR2P07307 311 aa13.69□□□□□ -0.22
CNOT1-217ENST00000569263 CDC25BP30305 580 aa13.69□□□□□ -0.22
CNOT1-217ENST00000569263 VIPR2P41587 438 aa13.69□□□□□ -0.22
CNOT1-217ENST00000569263 PGFP49763 221 aa13.69□□□□□ -0.22
CNOT1-217ENST00000569263 ADKP55263 362 aaKnown RBP13.69□□□□□ -0.22
CNOT1-217ENST00000569263 CENPCQ03188 943 aa13.69□□□□□ -0.22
CNOT1-217ENST00000569263 GOLGA8FQ08AF8 430 aa13.69□□□□□ -0.22
CNOT1-217ENST00000569263 GOLGA8DPQ0D2H9 430 aa13.69□□□□□ -0.22
CNOT1-217ENST00000569263 TBX2Q13207 712 aaPredicted RBP13.69□□□□□ -0.22
CNOT1-217ENST00000569263 PPP1R2P3Q6NXS1 205 aa13.69□□□□□ -0.22
CNOT1-217ENST00000569263 MMS22LQ6ZRQ5 1243 aa13.69□□□□□ -0.22
CNOT1-217ENST00000569263 FAM183BPQ6ZVS7 135 aa13.69□□□□□ -0.22
CNOT1-217ENST00000569263 ZNF571Q7Z3V5 609 aaPredicted RBP13.69□□□□□ -0.22
CNOT1-217ENST00000569263 RNF139Q8WU17 664 aa13.69□□□□□ -0.22
CNOT1-217ENST00000569263 FGF14Q92915 247 aa13.69□□□□□ -0.22
CNOT1-217ENST00000569263 NXPE3Q969Y0 559 aa13.69□□□□□ -0.22
CNOT1-217ENST00000569263 ELSPBP1Q96BH3 223 aa13.69□□□□□ -0.22
CNOT1-217ENST00000569263 C18orf8Q96DM3 657 aa13.69□□□□□ -0.22
CNOT1-217ENST00000569263 SLC22A12Q96S37 553 aa13.69□□□□□ -0.22
CNOT1-217ENST00000569263 CYP2S1Q96SQ9 504 aa13.69□□□□□ -0.22
CNOT1-217ENST00000569263 DNAJC7Q99615 494 aa13.69□□□□□ -0.22
CNOT1-217ENST00000569263 C11orf70Q9BRQ4 267 aa13.69□□□□□ -0.22
CNOT1-217ENST00000569263 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.69□□□□□ -0.22
CNOT1-217ENST00000569263 TRIM62Q9BVG3 475 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms