RNA–Protein interactions for RNA: ENST00000567071.5

CAPN3-216, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-216ENST00000567071 FOXD4L5Q5VV16 416 aaPredicted RBP10.4□□□□□ -0.74
CAPN3-216ENST00000567071 METTL3Q86U44 580 aaKnown RBP10.4□□□□□ -0.74
CAPN3-216ENST00000567071 C12orf40Q86WS4 652 aa10.4□□□□□ -0.74
CAPN3-216ENST00000567071 DCBLD1Q8N8Z6 715 aa10.4□□□□□ -0.74
CAPN3-216ENST00000567071 OR10T2Q8NGX3 314 aa10.4□□□□□ -0.74
CAPN3-216ENST00000567071 PIGOQ8TEQ8 1089 aa10.4□□□□□ -0.74
CAPN3-216ENST00000567071 FOXD4L4Q8WXT5 416 aaPredicted RBP10.4□□□□□ -0.74
CAPN3-216ENST00000567071 ERLEC1Q96DZ1 483 aa10.4□□□□□ -0.74
CAPN3-216ENST00000567071 NAP1L4Q99733 375 aaKnown RBP10.4□□□□□ -0.74
CAPN3-216ENST00000567071 PCED1AQ9H1Q7 454 aa10.4□□□□□ -0.74
CAPN3-216ENST00000567071 CD93Q9NPY3 652 aa10.4□□□□□ -0.74
CAPN3-216ENST00000567071 GJB4Q9NTQ9 266 aa10.4□□□□□ -0.74
CAPN3-216ENST00000567071 PCDHA4Q9UN74 947 aa10.4□□□□□ -0.74
CAPN3-216ENST00000567071 KIF3AQ9Y496 699 aa10.4□□□□□ -0.74
CAPN3-216ENST00000567071 ANAPC1Q9H1A4 1944 aa10.4□□□□□ -0.74
CAPN3-216ENST00000567071 CLEC18AA5D8T8 446 aa10.39□□□□□ -0.75
CAPN3-216ENST00000567071 KCNK3O14649 394 aa10.39□□□□□ -0.75
CAPN3-216ENST00000567071 TRIM66O15016 1216 aa10.39□□□□□ -0.75
CAPN3-216ENST00000567071 PPFIA2O75334 1257 aa10.39□□□□□ -0.75
CAPN3-216ENST00000567071 TADA3O75528 432 aa10.39□□□□□ -0.75
CAPN3-216ENST00000567071 DXOO77932 396 aaKnown RBP10.39□□□□□ -0.75
CAPN3-216ENST00000567071 MPOP05164 745 aa10.39□□□□□ -0.75
CAPN3-216ENST00000567071 ACADMP11310 421 aa10.39□□□□□ -0.75
CAPN3-216ENST00000567071 HARSP12081 509 aaKnown RBP10.39□□□□□ -0.75
CAPN3-216ENST00000567071 XRCC6P12956 609 aaKnown RBP eCLIP10.39□□□□□ -0.75
CAPN3-216ENST00000567071 PFKLP17858 780 aa10.39□□□□□ -0.75
CAPN3-216ENST00000567071 SYT1P21579 422 aa10.39□□□□□ -0.75
CAPN3-216ENST00000567071 C21orf59P57076 290 aa10.39□□□□□ -0.75
CAPN3-216ENST00000567071 GSE1Q14687 1217 aa10.39□□□□□ -0.75
CAPN3-216ENST00000567071 CLEC18BQ6UXF7 455 aa10.39□□□□□ -0.75
CAPN3-216ENST00000567071 TERB1Q8NA31 727 aa10.39□□□□□ -0.75
CAPN3-216ENST00000567071 CLEC18CQ8NCF0 446 aa10.39□□□□□ -0.75
CAPN3-216ENST00000567071 SCFD1Q8WVM8 642 aa10.39□□□□□ -0.75
CAPN3-216ENST00000567071 SKA1Q96BD8 255 aa10.39□□□□□ -0.75
CAPN3-216ENST00000567071 VCPIP1Q96JH7 1222 aa10.39□□□□□ -0.75
CAPN3-216ENST00000567071 C8orf76Q96K31 380 aa10.39□□□□□ -0.75
CAPN3-216ENST00000567071 SENP8Q96LD8 212 aa10.39□□□□□ -0.75
CAPN3-216ENST00000567071 NUP58Q9BVL2 599 aa10.39□□□□□ -0.75
CAPN3-216ENST00000567071 MRPL4Q9BYD3 311 aaKnown RBP10.39□□□□□ -0.75
CAPN3-216ENST00000567071 SLC6A17Q9H1V8 727 aa10.39□□□□□ -0.75
CAPN3-216ENST00000567071 GCNT4Q9P109 453 aa10.39□□□□□ -0.75
CAPN3-216ENST00000567071 TBC1D14Q9P2M4 693 aa10.39□□□□□ -0.75
CAPN3-216ENST00000567071 PLEKHB1Q9UF11 243 aaPredicted RBP10.39□□□□□ -0.75
CAPN3-216ENST00000567071 UBQLN1Q9UMX0 589 aaKnown RBP10.39□□□□□ -0.75
CAPN3-216ENST00000567071 PHLPP2Q6ZVD8 1323 aa10.38□□□□□ -0.75
CAPN3-216ENST00000567071 C2orf78A6NCI8 922 aa10.38□□□□□ -0.75
CAPN3-216ENST00000567071 H3BQV1 296 aa10.38□□□□□ -0.75
CAPN3-216ENST00000567071 CBX4O00257 560 aa10.38□□□□□ -0.75
CAPN3-216ENST00000567071 YKT6O15498 198 aa10.38□□□□□ -0.75
CAPN3-216ENST00000567071 STX6O43752 255 aa10.38□□□□□ -0.75
CAPN3-216ENST00000567071 CCNT1O60563 726 aaKnown RBP10.38□□□□□ -0.75
CAPN3-216ENST00000567071 NOL4O94818 638 aa10.38□□□□□ -0.75
CAPN3-216ENST00000567071 C7P10643 843 aa10.38□□□□□ -0.75
CAPN3-216ENST00000567071 CYP3A5P20815 502 aa10.38□□□□□ -0.75
CAPN3-216ENST00000567071 PDCP20941 246 aa10.38□□□□□ -0.75
CAPN3-216ENST00000567071 E2F1Q01094 437 aa10.38□□□□□ -0.75
CAPN3-216ENST00000567071 NOLC1Q14978 699 aaKnown RBP eCLIP10.38□□□□□ -0.75
CAPN3-216ENST00000567071 NFE2Q16621 373 aaPredicted RBP10.38□□□□□ -0.75
CAPN3-216ENST00000567071 EGFLAMQ63HQ2 1017 aa10.38□□□□□ -0.75
CAPN3-216ENST00000567071 RHBDF2Q6PJF5 856 aa10.38□□□□□ -0.75
CAPN3-216ENST00000567071 DDX42Q86XP3 938 aaKnown RBP eCLIP10.38□□□□□ -0.75
CAPN3-216ENST00000567071 GATAD2AQ86YP4 633 aa10.38□□□□□ -0.75
CAPN3-216ENST00000567071 BLIDQ8IZY5 108 aa10.38□□□□□ -0.75
CAPN3-216ENST00000567071 BSNDQ8WZ55 320 aa10.38□□□□□ -0.75
CAPN3-216ENST00000567071 RFFLQ8WZ73 363 aa10.38□□□□□ -0.75
CAPN3-216ENST00000567071 WASF1Q92558 559 aa10.38□□□□□ -0.75
CAPN3-216ENST00000567071 ACO2Q99798 780 aaKnown RBP10.38□□□□□ -0.75
CAPN3-216ENST00000567071 GABRG3Q99928 467 aa10.38□□□□□ -0.75
CAPN3-216ENST00000567071 OSGEPQ9NPF4 335 aa10.38□□□□□ -0.75
CAPN3-216ENST00000567071 ITM2CQ9NQX7 267 aa10.38□□□□□ -0.75
CAPN3-216ENST00000567071 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.38□□□□□ -0.75
CAPN3-216ENST00000567071 USP36Q9P275 1121 aaKnown RBP10.38□□□□□ -0.75
CAPN3-216ENST00000567071 STARD13Q9Y3M8 1113 aa10.38□□□□□ -0.75
CAPN3-216ENST00000567071 TP53BP1Q12888 1972 aaPredicted RBP10.37□□□□□ -0.75
CAPN3-216ENST00000567071 A0A1B0GTQ1 180 aa10.37□□□□□ -0.75
CAPN3-216ENST00000567071 GFRA2O00451 464 aa10.37□□□□□ -0.75
CAPN3-216ENST00000567071 TULP3O75386 442 aa10.37□□□□□ -0.75
CAPN3-216ENST00000567071 MT-CO3P00414 261 aa10.37□□□□□ -0.75
CAPN3-216ENST00000567071 CYP11A1P05108 521 aa10.37□□□□□ -0.75
CAPN3-216ENST00000567071 CTSKP43235 329 aa10.37□□□□□ -0.75
CAPN3-216ENST00000567071 LSSP48449 732 aa10.37□□□□□ -0.75
CAPN3-216ENST00000567071 TSPY1Q01534 308 aa10.37□□□□□ -0.75
CAPN3-216ENST00000567071 TRIM29Q14134 588 aa10.37□□□□□ -0.75
CAPN3-216ENST00000567071 ZSCAN23Q3MJ62 389 aa10.37□□□□□ -0.75
CAPN3-216ENST00000567071 LY6G5CQ5SRR4 150 aa10.37□□□□□ -0.75
CAPN3-216ENST00000567071 HIST2H2BCQ6DN03 193 aa10.37□□□□□ -0.75
CAPN3-216ENST00000567071 GRAMD4Q6IC98 578 aa10.37□□□□□ -0.75
CAPN3-216ENST00000567071 MPZL3Q6UWV2 235 aa10.37□□□□□ -0.75
CAPN3-216ENST00000567071 NEK8Q86SG6 692 aa10.37□□□□□ -0.75
CAPN3-216ENST00000567071 PHTF2Q8N3S3 785 aa10.37□□□□□ -0.75
CAPN3-216ENST00000567071 EID2Q8N6I1 236 aa10.37□□□□□ -0.75
CAPN3-216ENST00000567071 NAT16Q8N8M0 369 aa10.37□□□□□ -0.75
CAPN3-216ENST00000567071 STKLD1Q8NE28 680 aa10.37□□□□□ -0.75
CAPN3-216ENST00000567071 C1orf216Q8TAB5 229 aa10.37□□□□□ -0.75
CAPN3-216ENST00000567071 LRRC15Q8TF66 581 aa10.37□□□□□ -0.75
CAPN3-216ENST00000567071 OTUB2Q96DC9 234 aa10.37□□□□□ -0.75
CAPN3-216ENST00000567071 MYRFLQ96LU7 910 aa10.37□□□□□ -0.75
CAPN3-216ENST00000567071 SEMA3CQ99985 751 aa10.37□□□□□ -0.75
CAPN3-216ENST00000567071 HSD17B14Q9BPX1 270 aa10.37□□□□□ -0.75
CAPN3-216ENST00000567071 KIFC3Q9BVG8 833 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms