RNA–Protein interactions for RNA: ENST00000566296.1

TSR3-202, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

TSL 3

Gene TSR3, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-202ENST00000566296 HMGB4Q8WW32 186 aa17.51■□□□□ 0.39
TSR3-202ENST00000566296 KCNK16Q96T55 309 aa17.51■□□□□ 0.39
TSR3-202ENST00000566296 CEP295Q9C0D2 2601 aa17.51■□□□□ 0.39
TSR3-202ENST00000566296 GZF1Q9H116 711 aaPredicted RBP17.51■□□□□ 0.39
TSR3-202ENST00000566296 COMMD8Q9NX08 183 aa17.51■□□□□ 0.39
TSR3-202ENST00000566296 GMIPQ9P107 970 aa17.51■□□□□ 0.39
TSR3-202ENST00000566296 EVLQ9UI08 416 aaPredicted RBP17.51■□□□□ 0.39
TSR3-202ENST00000566296 TBC1D3BA6NDS4 549 aa17.5■□□□□ 0.39
TSR3-202ENST00000566296 PATE3B3GLJ2 98 aa17.5■□□□□ 0.39
TSR3-202ENST00000566296 HOXC11O43248 304 aaPredicted RBP17.5■□□□□ 0.39
TSR3-202ENST00000566296 IRF1P10914 325 aa17.5■□□□□ 0.39
TSR3-202ENST00000566296 TRIM21P19474 475 aaKnown RBP17.5■□□□□ 0.39
TSR3-202ENST00000566296 KIR2DL1P43626 348 aaPredicted RBP17.5■□□□□ 0.39
TSR3-202ENST00000566296 AFMP43652 599 aa17.5■□□□□ 0.39
TSR3-202ENST00000566296 ME1P48163 572 aa17.5■□□□□ 0.39
TSR3-202ENST00000566296 CDH8P55286 799 aa17.5■□□□□ 0.39
TSR3-202ENST00000566296 MESP2Q0VG99 397 aa17.5■□□□□ 0.39
TSR3-202ENST00000566296 LMAN2Q12907 356 aa17.5■□□□□ 0.39
TSR3-202ENST00000566296 CUL4BQ13620 913 aa17.5■□□□□ 0.39
TSR3-202ENST00000566296 SH3PXD2AQ5TCZ1 1133 aa17.5■□□□□ 0.39
TSR3-202ENST00000566296 ARMCX6Q7L4S7 300 aa17.5■□□□□ 0.39
TSR3-202ENST00000566296 CEP57L1Q8IYX8 460 aa17.5■□□□□ 0.39
TSR3-202ENST00000566296 SCAMP5Q8TAC9 235 aa17.5■□□□□ 0.39
TSR3-202ENST00000566296 RLN3Q8WXF3 142 aa17.5■□□□□ 0.39
TSR3-202ENST00000566296 ZFRQ96KR1 1074 aaKnown RBP17.5■□□□□ 0.39
TSR3-202ENST00000566296 NUSAP1Q9BXS6 441 aaKnown RBP17.5■□□□□ 0.39
TSR3-202ENST00000566296 DEC1Q9P2X7 70 aa17.5■□□□□ 0.39
TSR3-202ENST00000566296 TNRC6BQ9UPQ9 1833 aaKnown RBP17.49■□□□□ 0.39
TSR3-202ENST00000566296 A0A0A0MRY4 1105 aa17.49■□□□□ 0.39
TSR3-202ENST00000566296 LRRIQ3A6PVS8 624 aaPredicted RBP17.49■□□□□ 0.39
TSR3-202ENST00000566296 TNFRSF10BO14763 440 aa17.49■□□□□ 0.39
TSR3-202ENST00000566296 CHRM1P11229 460 aaPredicted RBP17.49■□□□□ 0.39
TSR3-202ENST00000566296 ANO4Q32M45 955 aa17.49■□□□□ 0.39
TSR3-202ENST00000566296 UAP1L1Q3KQV9 507 aa17.49■□□□□ 0.39
TSR3-202ENST00000566296 FOXD4L6Q3SYB3 417 aaPredicted RBP17.49■□□□□ 0.39
TSR3-202ENST00000566296 TRIM61Q5EBN2 209 aa17.49■□□□□ 0.39
TSR3-202ENST00000566296 EMC10Q5UCC4 262 aa17.49■□□□□ 0.39
TSR3-202ENST00000566296 SNX30Q5VWJ9 437 aa17.49■□□□□ 0.39
TSR3-202ENST00000566296 LYSMD4Q5XG99 296 aa17.49■□□□□ 0.39
TSR3-202ENST00000566296 FOXD4L3Q6VB84 417 aaPredicted RBP17.49■□□□□ 0.39
TSR3-202ENST00000566296 BBS7Q8IWZ6 715 aa17.49■□□□□ 0.39
TSR3-202ENST00000566296 ZNF513Q8N8E2 541 aaPredicted RBP17.49■□□□□ 0.39
TSR3-202ENST00000566296 TERB1Q8NA31 727 aa17.49■□□□□ 0.39
TSR3-202ENST00000566296 PLEKHO2Q8TD55 490 aa17.49■□□□□ 0.39
TSR3-202ENST00000566296 KCNV2Q8TDN2 545 aa17.49■□□□□ 0.39
TSR3-202ENST00000566296 PARD3BQ8TEW8 1205 aa17.49■□□□□ 0.39
TSR3-202ENST00000566296 DUSP9Q99956 384 aaKnown RBP17.49■□□□□ 0.39
TSR3-202ENST00000566296 FBXO44Q9H4M3 255 aa17.49■□□□□ 0.39
TSR3-202ENST00000566296 CCSER2Q9H7U1 834 aa17.49■□□□□ 0.39
TSR3-202ENST00000566296 ZDHHC4Q9NPG8 344 aa17.49■□□□□ 0.39
TSR3-202ENST00000566296 SPHK2Q9NRA0 654 aa17.49■□□□□ 0.39
TSR3-202ENST00000566296 EXOC1Q9NV70 894 aa17.49■□□□□ 0.39
TSR3-202ENST00000566296 CHORDC1Q9UHD1 332 aaPredicted RBP17.49■□□□□ 0.39
TSR3-202ENST00000566296 CFAP45Q9UL16 551 aa17.49■□□□□ 0.39
TSR3-202ENST00000566296 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.48■□□□□ 0.39
TSR3-202ENST00000566296 GIPC1O14908 333 aa17.48■□□□□ 0.39
TSR3-202ENST00000566296 ZBTB24O43167 697 aaPredicted RBP17.48■□□□□ 0.39
TSR3-202ENST00000566296 TLR5O60602 858 aa17.48■□□□□ 0.39
TSR3-202ENST00000566296 ADAM23O75077 832 aa17.48■□□□□ 0.39
TSR3-202ENST00000566296 TULP3O75386 442 aa17.48■□□□□ 0.39
TSR3-202ENST00000566296 ZDHHC11BP0C7U3 371 aa17.48■□□□□ 0.39
TSR3-202ENST00000566296 CCDC130P13994 396 aa17.48■□□□□ 0.39
TSR3-202ENST00000566296 CSRP1P21291 193 aaKnown RBP17.48■□□□□ 0.39
TSR3-202ENST00000566296 IRX4P78413 519 aa17.48■□□□□ 0.39
TSR3-202ENST00000566296 GOLGA8FQ08AF8 430 aa17.48■□□□□ 0.39
TSR3-202ENST00000566296 GOLGA8DPQ0D2H9 430 aa17.48■□□□□ 0.39
TSR3-202ENST00000566296 FOXC1Q12948 553 aa17.48■□□□□ 0.39
TSR3-202ENST00000566296 C10orf76Q5T2E6 689 aa17.48■□□□□ 0.39
TSR3-202ENST00000566296 RESP18Q5W5W9 173 aa17.48■□□□□ 0.39
TSR3-202ENST00000566296 ACOT1Q86TX2 421 aa17.48■□□□□ 0.39
TSR3-202ENST00000566296 SYT12Q8IV01 421 aa17.48■□□□□ 0.39
TSR3-202ENST00000566296 ETFBKMTQ8IXQ9 262 aa17.48■□□□□ 0.39
TSR3-202ENST00000566296 TMEFF1Q8IYR6 380 aa17.48■□□□□ 0.39
TSR3-202ENST00000566296 FUKQ8N0W3 1084 aa17.48■□□□□ 0.39
TSR3-202ENST00000566296 PHTF2Q8N3S3 785 aa17.48■□□□□ 0.39
TSR3-202ENST00000566296 NAT16Q8N8M0 369 aa17.48■□□□□ 0.39
TSR3-202ENST00000566296 SDCBP2Q9H190 292 aa17.48■□□□□ 0.39
TSR3-202ENST00000566296 TLR8Q9NR97 1041 aaKnown RBP17.48■□□□□ 0.39
TSR3-202ENST00000566296 IL37Q9NZH6 218 aa17.48■□□□□ 0.39
TSR3-202ENST00000566296 LSM7Q9UK45 103 aaKnown RBP17.48■□□□□ 0.39
TSR3-202ENST00000566296 FAM92AA1XBS5 289 aa17.47■□□□□ 0.39
TSR3-202ENST00000566296 C4BPAP04003 597 aaKnown RBP17.47■□□□□ 0.39
TSR3-202ENST00000566296 CEACAM1P13688 526 aa17.47■□□□□ 0.39
TSR3-202ENST00000566296 HOXB2P14652 356 aa17.47■□□□□ 0.39
TSR3-202ENST00000566296 MAP7D1Q3KQU3 841 aa17.47■□□□□ 0.39
TSR3-202ENST00000566296 SPDYCQ5MJ68 293 aa17.47■□□□□ 0.39
TSR3-202ENST00000566296 GRAMD4Q6IC98 578 aa17.47■□□□□ 0.39
TSR3-202ENST00000566296 PAQR9Q6ZVX9 377 aa17.47■□□□□ 0.39
TSR3-202ENST00000566296 SLC2A14Q8TDB8 520 aa17.47■□□□□ 0.39
TSR3-202ENST00000566296 TAF4BQ92750 862 aa17.47■□□□□ 0.39
TSR3-202ENST00000566296 PCDHA7Q9UN72 937 aa17.47■□□□□ 0.39
TSR3-202ENST00000566296 ATXN2Q99700 1313 aaKnown RBP17.47■□□□□ 0.39
TSR3-202ENST00000566296 CDX4O14627 284 aaPredicted RBP17.46■□□□□ 0.39
TSR3-202ENST00000566296 AP5Z1O43299 807 aa17.46■□□□□ 0.39
TSR3-202ENST00000566296 VNN1O95497 513 aa17.46■□□□□ 0.39
TSR3-202ENST00000566296 RPN1P04843 607 aaKnown RBP17.46■□□□□ 0.39
TSR3-202ENST00000566296 FAM200BP0CF97 657 aa17.46■□□□□ 0.39
TSR3-202ENST00000566296 HOXD12P35452 270 aa17.46■□□□□ 0.39
TSR3-202ENST00000566296 PIK3CAP42336 1068 aa17.46■□□□□ 0.39
TSR3-202ENST00000566296 PTGER3P43115 390 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms