RNA–Protein interactions for RNA: ENST00000565975.5

SPNS1-207, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 1 (best) BASIC

Gene SPNS1, Length 1,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-207ENST00000565975 CYTH2Q99418 400 aa23.27■■□□□ 1.32
SPNS1-207ENST00000565975 ZNF670Q9BS34 389 aa23.27■■□□□ 1.32
SPNS1-207ENST00000565975 RAB6CQ9H0N0 254 aa23.27■■□□□ 1.32
SPNS1-207ENST00000565975 CHUKO15111 745 aa23.27■■□□□ 1.32
SPNS1-207ENST00000565975 GRAP2O75791 330 aa23.27■■□□□ 1.32
SPNS1-207ENST00000565975 NCALDP61601 193 aa23.27■■□□□ 1.32
SPNS1-207ENST00000565975 SNCBQ16143 134 aa23.27■■□□□ 1.32
SPNS1-207ENST00000565975 HHATQ5VTY9 493 aa23.27■■□□□ 1.32
SPNS1-207ENST00000565975 CATSPER4Q7RTX7 472 aa23.27■■□□□ 1.32
SPNS1-207ENST00000565975 ZC3H18Q86VM9 953 aaKnown RBP23.27■■□□□ 1.32
SPNS1-207ENST00000565975 PQLC3Q8N755 202 aa23.27■■□□□ 1.32
SPNS1-207ENST00000565975 MAGEC3Q8TD91 643 aa23.27■■□□□ 1.32
SPNS1-207ENST00000565975 NGRNQ9NPE2 291 aaKnown RBP23.27■■□□□ 1.32
SPNS1-207ENST00000565975 CNTN3Q9P232 1028 aa23.27■■□□□ 1.32
SPNS1-207ENST00000565975 TEX264Q9Y6I9 313 aa23.27■■□□□ 1.32
SPNS1-207ENST00000565975 CCL15-CCL14A0A0B4J2E2 113 aa23.26■■□□□ 1.31
SPNS1-207ENST00000565975 GPR32O75388 356 aa23.26■■□□□ 1.31
SPNS1-207ENST00000565975 PTPN9P43378 593 aa23.26■■□□□ 1.31
SPNS1-207ENST00000565975 MNAT1P51948 309 aa23.26■■□□□ 1.31
SPNS1-207ENST00000565975 ELF3P78545 371 aaPredicted RBP23.26■■□□□ 1.31
SPNS1-207ENST00000565975 EFTUD2Q15029 972 aaKnown RBP eCLIP23.26■■□□□ 1.31
SPNS1-207ENST00000565975 SLC1A5Q15758 541 aa23.26■■□□□ 1.31
SPNS1-207ENST00000565975 CCL15Q16663 113 aa23.26■■□□□ 1.31
SPNS1-207ENST00000565975 NOTUMQ6P988 496 aa23.26■■□□□ 1.31
SPNS1-207ENST00000565975 C4orf22Q6V702 233 aa23.26■■□□□ 1.31
SPNS1-207ENST00000565975 LRRC8CQ8TDW0 803 aa23.26■■□□□ 1.31
SPNS1-207ENST00000565975 TINF2Q9BSI4 451 aa23.26■■□□□ 1.31
SPNS1-207ENST00000565975 SNRNP25Q9BV90 132 aaKnown RBP23.26■■□□□ 1.31
SPNS1-207ENST00000565975 ECT2Q9H8V3 914 aa23.26■■□□□ 1.31
SPNS1-207ENST00000565975 RRAGCQ9HB90 399 aa23.26■■□□□ 1.31
SPNS1-207ENST00000565975 SETD4Q9NVD3 440 aa23.26■■□□□ 1.31
SPNS1-207ENST00000565975 PHTF1Q9UMS5 762 aa23.26■■□□□ 1.31
SPNS1-207ENST00000565975 PPEF2O14830 753 aa23.25■■□□□ 1.31
SPNS1-207ENST00000565975 PAPSS1O43252 624 aaPredicted RBP23.25■■□□□ 1.31
SPNS1-207ENST00000565975 EDF1O60869 148 aaKnown RBP23.25■■□□□ 1.31
SPNS1-207ENST00000565975 KRT4P19013 534 aa23.25■■□□□ 1.31
SPNS1-207ENST00000565975 BCAR1P56945 870 aa23.25■■□□□ 1.31
SPNS1-207ENST00000565975 ATP11AP98196 1134 aa23.25■■□□□ 1.31
SPNS1-207ENST00000565975 SCYL2Q6P3W7 929 aa23.25■■□□□ 1.31
SPNS1-207ENST00000565975 C1orf228Q6PIY5 440 aa23.25■■□□□ 1.31
SPNS1-207ENST00000565975 ALKAL1Q6UXT8 129 aa23.25■■□□□ 1.31
SPNS1-207ENST00000565975 ARCQ7LC44 396 aa23.25■■□□□ 1.31
SPNS1-207ENST00000565975 MRRFQ96E11 262 aaKnown RBP23.25■■□□□ 1.31
SPNS1-207ENST00000565975 PNPLA8Q9NP80 782 aa23.25■■□□□ 1.31
SPNS1-207ENST00000565975 CYLDQ9NQC7 956 aa23.25■■□□□ 1.31
SPNS1-207ENST00000565975 TUBGCP4Q9UGJ1 667 aa23.25■■□□□ 1.31
SPNS1-207ENST00000565975 NME7Q9Y5B8 376 aa23.25■■□□□ 1.31
SPNS1-207ENST00000565975 CEP350Q5VT06 3117 aa23.25■■□□□ 1.31
SPNS1-207ENST00000565975 TM9SF1O15321 606 aa23.25■■□□□ 1.31
SPNS1-207ENST00000565975 CAPN15O75808 1086 aa23.25■■□□□ 1.31
SPNS1-207ENST00000565975 ELK3P41970 407 aa23.25■■□□□ 1.31
SPNS1-207ENST00000565975 SKIV2L2P42285 1042 aaKnown RBP23.25■■□□□ 1.31
SPNS1-207ENST00000565975 MAGEA6P43360 314 aa23.25■■□□□ 1.31
SPNS1-207ENST00000565975 DNAJC3Q13217 504 aa23.25■■□□□ 1.31
SPNS1-207ENST00000565975 C9orf57Q5W0N0 161 aa23.25■■□□□ 1.31
SPNS1-207ENST00000565975 FAM47EQ6ZV65 393 aa23.25■■□□□ 1.31
SPNS1-207ENST00000565975 TAB3Q8N5C8 712 aaPredicted RBP23.25■■□□□ 1.31
SPNS1-207ENST00000565975 FITM2Q8N6M3 262 aa23.25■■□□□ 1.31
SPNS1-207ENST00000565975 RMDN2Q96LZ7 410 aa23.25■■□□□ 1.31
SPNS1-207ENST00000565975 TSPAN18Q96SJ8 248 aa23.25■■□□□ 1.31
SPNS1-207ENST00000565975 GRID1Q9ULK0 1009 aa23.25■■□□□ 1.31
SPNS1-207ENST00000565975 UBQLN1Q9UMX0 589 aaKnown RBP23.25■■□□□ 1.31
SPNS1-207ENST00000565975 CHMP2BQ9UQN3 213 aa23.25■■□□□ 1.31
SPNS1-207ENST00000565975 SMIM35A0A1B0GVV1 85 aa23.24■■□□□ 1.31
SPNS1-207ENST00000565975 ECM2O94769 699 aaPredicted RBP23.24■■□□□ 1.31
SPNS1-207ENST00000565975 AXLP30530 894 aa23.24■■□□□ 1.31
SPNS1-207ENST00000565975 RPL34P49207 117 aaKnown RBP23.24■■□□□ 1.31
SPNS1-207ENST00000565975 MGAT5Q09328 741 aa23.24■■□□□ 1.31
SPNS1-207ENST00000565975 PCDH19Q8TAB3 1148 aa23.24■■□□□ 1.31
SPNS1-207ENST00000565975 EIF2AQ9BY44 585 aaKnown RBP23.24■■□□□ 1.31
SPNS1-207ENST00000565975 CXCL16Q9H2A7 254 aa23.24■■□□□ 1.31
SPNS1-207ENST00000565975 FAM49BQ9NUQ9 324 aa23.24■■□□□ 1.31
SPNS1-207ENST00000565975 NRCAMQ92823 1304 aa23.24■■□□□ 1.31
SPNS1-207ENST00000565975 KCNN4O15554 427 aa23.23■■□□□ 1.31
SPNS1-207ENST00000565975 GABBR2O75899 941 aa23.23■■□□□ 1.31
SPNS1-207ENST00000565975 TOMM70O94826 608 aa23.23■■□□□ 1.31
SPNS1-207ENST00000565975 HDAC4P56524 1084 aa23.23■■□□□ 1.31
SPNS1-207ENST00000565975 LVRNQ6Q4G3 990 aa23.23■■□□□ 1.31
SPNS1-207ENST00000565975 SLC26A9Q7LBE3 791 aa23.23■■□□□ 1.31
SPNS1-207ENST00000565975 ECHDC2Q86YB7 292 aa23.23■■□□□ 1.31
SPNS1-207ENST00000565975 CDKL3Q8IVW4 592 aaPredicted RBP23.23■■□□□ 1.31
SPNS1-207ENST00000565975 OR6B3Q8NGW1 331 aa23.23■■□□□ 1.31
SPNS1-207ENST00000565975 BRI3BPQ8WY22 251 aa23.23■■□□□ 1.31
SPNS1-207ENST00000565975 C11orf84Q9BUA3 381 aaPredicted RBP23.23■■□□□ 1.31
SPNS1-207ENST00000565975 DNAI2Q9GZS0 605 aa23.23■■□□□ 1.31
SPNS1-207ENST00000565975 GPATCH2LQ9NWQ4 482 aa23.23■■□□□ 1.31
SPNS1-207ENST00000565975 USH1CQ9Y6N9 552 aa23.23■■□□□ 1.31
SPNS1-207ENST00000565975 IQANK1A0A1B0GTG1 560 aa23.23■■□□□ 1.31
SPNS1-207ENST00000565975 ZBED1O96006 694 aa23.23■■□□□ 1.31
SPNS1-207ENST00000565975 CD4P01730 458 aa23.23■■□□□ 1.31
SPNS1-207ENST00000565975 DARSP14868 501 aaKnown RBP23.23■■□□□ 1.31
SPNS1-207ENST00000565975 NRLP54845 237 aa23.23■■□□□ 1.31
SPNS1-207ENST00000565975 BST2Q10589 180 aaKnown RBP23.23■■□□□ 1.31
SPNS1-207ENST00000565975 RIPK1Q13546 671 aa23.23■■□□□ 1.31
SPNS1-207ENST00000565975 SOWAHAQ2M3V2 549 aa23.23■■□□□ 1.31
SPNS1-207ENST00000565975 PLEKHH3Q7Z736 793 aa23.23■■□□□ 1.31
SPNS1-207ENST00000565975 IGDCC3Q8IVU1 814 aa23.23■■□□□ 1.31
SPNS1-207ENST00000565975 SCUBE3Q8IX30 993 aa23.23■■□□□ 1.31
SPNS1-207ENST00000565975 CRYBG2Q8N1P7 616 aa23.23■■□□□ 1.31
SPNS1-207ENST00000565975 BANPQ8N9N5 519 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms