RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 ZDHHC4Q9NPG8 344 aa9.1□□□□□ -0.95
CAPN3-213ENST00000565173 COMMD8Q9NX08 183 aa9.1□□□□□ -0.95
CAPN3-213ENST00000565173 GMIPQ9P107 970 aa9.1□□□□□ -0.95
CAPN3-213ENST00000565173 TBC1D14Q9P2M4 693 aa9.1□□□□□ -0.95
CAPN3-213ENST00000565173 HMGXB4Q9UGU5 601 aa9.1□□□□□ -0.95
CAPN3-213ENST00000565173 HCN2Q9UL51 889 aa9.1□□□□□ -0.95
CAPN3-213ENST00000565173 CACNA1BQ00975 2339 aa9.1□□□□□ -0.95
CAPN3-213ENST00000565173 MAP1BP46821 2468 aaKnown RBP9.1□□□□□ -0.95
CAPN3-213ENST00000565173 MYOFQ9NZM1 2061 aa9.09□□□□□ -0.95
CAPN3-213ENST00000565173 CHD6Q8TD26 2715 aa9.09□□□□□ -0.95
CAPN3-213ENST00000565173 LNP1A1A4G5 178 aa9.09□□□□□ -0.95
CAPN3-213ENST00000565173 C4orf47A7E2U8 309 aa9.09□□□□□ -0.95
CAPN3-213ENST00000565173 PATE3B3GLJ2 98 aa9.09□□□□□ -0.95
CAPN3-213ENST00000565173 HHLA1C9JL84 531 aa9.09□□□□□ -0.95
CAPN3-213ENST00000565173 PDXKO00764 312 aa9.09□□□□□ -0.95
CAPN3-213ENST00000565173 CDX4O14627 284 aaPredicted RBP9.09□□□□□ -0.95
CAPN3-213ENST00000565173 IKBKBO14920 756 aa9.09□□□□□ -0.95
CAPN3-213ENST00000565173 AP1G2O75843 785 aa9.09□□□□□ -0.95
CAPN3-213ENST00000565173 KCNK5O95279 499 aa9.09□□□□□ -0.95
CAPN3-213ENST00000565173 KLF8O95600 359 aaPredicted RBP9.09□□□□□ -0.95
CAPN3-213ENST00000565173 TBX18O95935 607 aa9.09□□□□□ -0.95
CAPN3-213ENST00000565173 ADH1CP00326 375 aa9.09□□□□□ -0.95
CAPN3-213ENST00000565173 ASS1P00966 412 aaKnown RBP9.09□□□□□ -0.95
CAPN3-213ENST00000565173 RPN1P04843 607 aaKnown RBP9.09□□□□□ -0.95
CAPN3-213ENST00000565173 APODP05090 189 aa9.09□□□□□ -0.95
CAPN3-213ENST00000565173 CCDC130P13994 396 aa9.09□□□□□ -0.95
CAPN3-213ENST00000565173 CMA1P23946 247 aa9.09□□□□□ -0.95
CAPN3-213ENST00000565173 GBP1P32455 592 aa9.09□□□□□ -0.95
CAPN3-213ENST00000565173 P2RY2P41231 377 aa9.09□□□□□ -0.95
CAPN3-213ENST00000565173 ASPAP45381 313 aa9.09□□□□□ -0.95
CAPN3-213ENST00000565173 NDST1P52848 882 aa9.09□□□□□ -0.95
CAPN3-213ENST00000565173 SHC2P98077 582 aa9.09□□□□□ -0.95
CAPN3-213ENST00000565173 ORC1Q13415 861 aa9.09□□□□□ -0.95
CAPN3-213ENST00000565173 HSF5Q4G112 596 aaPredicted RBP9.09□□□□□ -0.95
CAPN3-213ENST00000565173 RNF43Q68DV7 783 aa9.09□□□□□ -0.95
CAPN3-213ENST00000565173 C11orf74Q86VG3 221 aa9.09□□□□□ -0.95
CAPN3-213ENST00000565173 TMEM25Q86YD3 366 aa9.09□□□□□ -0.95
CAPN3-213ENST00000565173 BBS7Q8IWZ6 715 aa9.09□□□□□ -0.95
CAPN3-213ENST00000565173 CEP57L1Q8IYX8 460 aa9.09□□□□□ -0.95
CAPN3-213ENST00000565173 NAT16Q8N8M0 369 aa9.09□□□□□ -0.95
CAPN3-213ENST00000565173 SLC2A14Q8TDB8 520 aa9.09□□□□□ -0.95
CAPN3-213ENST00000565173 TMC2Q8TDI7 906 aa9.09□□□□□ -0.95
CAPN3-213ENST00000565173 RLN3Q8WXF3 142 aa9.09□□□□□ -0.95
CAPN3-213ENST00000565173 MED10Q9BTT4 135 aa9.09□□□□□ -0.95
CAPN3-213ENST00000565173 ARHGEF4Q9NR80 690 aa9.09□□□□□ -0.95
CAPN3-213ENST00000565173 SPHK2Q9NRA0 654 aa9.09□□□□□ -0.95
CAPN3-213ENST00000565173 KRT82Q9NSB4 513 aa9.09□□□□□ -0.95
CAPN3-213ENST00000565173 OSER1Q9NX31 292 aa9.09□□□□□ -0.95
CAPN3-213ENST00000565173 MBD1Q9UIS9 605 aaPredicted RBP9.09□□□□□ -0.95
CAPN3-213ENST00000565173 CFAP45Q9UL16 551 aa9.09□□□□□ -0.95
CAPN3-213ENST00000565173 HPSEQ9Y251 543 aa9.09□□□□□ -0.95
CAPN3-213ENST00000565173 AKAP13Q12802 2813 aa9.09□□□□□ -0.96
CAPN3-213ENST00000565173 ATP8B3O60423 1300 aa9.08□□□□□ -0.96
CAPN3-213ENST00000565173 A0A1B0GVL5 298 aa9.08□□□□□ -0.96
CAPN3-213ENST00000565173 TRIM24O15164 1050 aa9.08□□□□□ -0.96
CAPN3-213ENST00000565173 HOXC11O43248 304 aaPredicted RBP9.08□□□□□ -0.96
CAPN3-213ENST00000565173 TULP3O75386 442 aa9.08□□□□□ -0.96
CAPN3-213ENST00000565173 ALDH1A2O94788 518 aa9.08□□□□□ -0.96
CAPN3-213ENST00000565173 NR3C1P04150 777 aa9.08□□□□□ -0.96
CAPN3-213ENST00000565173 PFKFB1P16118 471 aa9.08□□□□□ -0.96
CAPN3-213ENST00000565173 MAP3K7CLP57077 242 aa9.08□□□□□ -0.96
CAPN3-213ENST00000565173 MCCD1P59942 119 aaPredicted RBP9.08□□□□□ -0.96
CAPN3-213ENST00000565173 IRX4P78413 519 aa9.08□□□□□ -0.96
CAPN3-213ENST00000565173 GAD2Q05329 585 aa9.08□□□□□ -0.96
CAPN3-213ENST00000565173 KDSRQ06136 332 aa9.08□□□□□ -0.96
CAPN3-213ENST00000565173 MAP7D1Q3KQU3 841 aa9.08□□□□□ -0.96
CAPN3-213ENST00000565173 EOGTQ5NDL2 527 aa9.08□□□□□ -0.96
CAPN3-213ENST00000565173 SPOPLQ6IQ16 392 aa9.08□□□□□ -0.96
CAPN3-213ENST00000565173 HTR3DQ70Z44 454 aa9.08□□□□□ -0.96
CAPN3-213ENST00000565173 GPRIN1Q7Z2K8 1008 aa9.08□□□□□ -0.96
CAPN3-213ENST00000565173 UNC93AQ86WB7 457 aa9.08□□□□□ -0.96
CAPN3-213ENST00000565173 MIB1Q86YT6 1006 aa9.08□□□□□ -0.96
CAPN3-213ENST00000565173 KCNV2Q8TDN2 545 aa9.08□□□□□ -0.96
CAPN3-213ENST00000565173 WHAMMQ8TF30 809 aa9.08□□□□□ -0.96
CAPN3-213ENST00000565173 TAF4BQ92750 862 aa9.08□□□□□ -0.96
CAPN3-213ENST00000565173 P2RY11Q96G91 374 aa9.08□□□□□ -0.96
CAPN3-213ENST00000565173 CHAMP1Q96JM3 812 aa9.08□□□□□ -0.96
CAPN3-213ENST00000565173 TWNKQ96RR1 684 aa9.08□□□□□ -0.96
CAPN3-213ENST00000565173 EDEM2Q9BV94 578 aa9.08□□□□□ -0.96
CAPN3-213ENST00000565173 KLF16Q9BXK1 252 aaPredicted RBP9.08□□□□□ -0.96
CAPN3-213ENST00000565173 APOBEC3GQ9HC16 384 aaKnown RBP9.08□□□□□ -0.96
CAPN3-213ENST00000565173 CD248Q9HCU0 757 aa9.08□□□□□ -0.96
CAPN3-213ENST00000565173 CYLDQ9NQC7 956 aa9.08□□□□□ -0.96
CAPN3-213ENST00000565173 TMEM74BQ9NUR3 256 aa9.08□□□□□ -0.96
CAPN3-213ENST00000565173 EXOC1Q9NV70 894 aa9.08□□□□□ -0.96
CAPN3-213ENST00000565173 SCML2Q9UQR0 700 aa9.08□□□□□ -0.96
CAPN3-213ENST00000565173 TRAF3IP3Q9Y228 551 aa9.08□□□□□ -0.96
CAPN3-213ENST00000565173 ZDHHC9Q9Y397 364 aa9.08□□□□□ -0.96
CAPN3-213ENST00000565173 SH3BP1Q9Y3L3 701 aa9.08□□□□□ -0.96
CAPN3-213ENST00000565173 STARD13Q9Y3M8 1113 aa9.08□□□□□ -0.96
CAPN3-213ENST00000565173 DMXL2Q8TDJ6 3036 aa9.08□□□□□ -0.96
CAPN3-213ENST00000565173 FREM2Q5SZK8 3169 aa9.08□□□□□ -0.96
CAPN3-213ENST00000565173 NUP205Q92621 2012 aa9.07□□□□□ -0.96
CAPN3-213ENST00000565173 THADAQ6YHU6 1953 aa9.07□□□□□ -0.96
CAPN3-213ENST00000565173 FAM237AA0A1B0GTK4 181 aa9.07□□□□□ -0.96
CAPN3-213ENST00000565173 TBC1D3BA6NDS4 549 aa9.07□□□□□ -0.96
CAPN3-213ENST00000565173 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.07□□□□□ -0.96
CAPN3-213ENST00000565173 GIPC1O14908 333 aa9.07□□□□□ -0.96
CAPN3-213ENST00000565173 KHNYNO15037 678 aaKnown RBP9.07□□□□□ -0.96
CAPN3-213ENST00000565173 MAPK13O15264 365 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms