RNA–Protein interactions for RNA: ENST00000564745.1

CDH1-207, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-207ENST00000564745 USP22Q9UPT9 525 aa5.59□□□□□ -1.51
CDH1-207ENST00000564745 COL15A1P39059 1388 aa5.58□□□□□ -1.52
CDH1-207ENST00000564745 B9A039 149 aa5.58□□□□□ -1.52
CDH1-207ENST00000564745 EXOC5O00471 708 aa5.58□□□□□ -1.52
CDH1-207ENST00000564745 PROM1O43490 865 aa5.58□□□□□ -1.52
CDH1-207ENST00000564745 SNX2O60749 519 aa5.58□□□□□ -1.52
CDH1-207ENST00000564745 ITGA2BP08514 1039 aa5.58□□□□□ -1.52
CDH1-207ENST00000564745 IL6RP08887 468 aaPredicted RBP5.58□□□□□ -1.52
CDH1-207ENST00000564745 PBX1P40424 430 aa5.58□□□□□ -1.52
CDH1-207ENST00000564745 PRKAA2P54646 552 aa5.58□□□□□ -1.52
CDH1-207ENST00000564745 ITIH3Q06033 890 aa5.58□□□□□ -1.52
CDH1-207ENST00000564745 TUBA3CQ13748 450 aa5.58□□□□□ -1.52
CDH1-207ENST00000564745 TRIM71Q2Q1W2 868 aaKnown RBP5.58□□□□□ -1.52
CDH1-207ENST00000564745 IGFL4Q6B9Z1 124 aa5.58□□□□□ -1.52
CDH1-207ENST00000564745 TUBA3EQ6PEY2 450 aa5.58□□□□□ -1.52
CDH1-207ENST00000564745 KCNV1Q6PIU1 500 aa5.58□□□□□ -1.52
CDH1-207ENST00000564745 KLHL17Q6TDP4 642 aa5.58□□□□□ -1.52
CDH1-207ENST00000564745 MOGAT3Q86VF5 341 aa5.58□□□□□ -1.52
CDH1-207ENST00000564745 SYNE4Q8N205 404 aa5.58□□□□□ -1.52
CDH1-207ENST00000564745 SH3RF3Q8TEJ3 882 aaPredicted RBP5.58□□□□□ -1.52
CDH1-207ENST00000564745 ABHD5Q8WTS1 349 aa5.58□□□□□ -1.52
CDH1-207ENST00000564745 SOCS4Q8WXH5 440 aa5.58□□□□□ -1.52
CDH1-207ENST00000564745 TFAP2BQ92481 460 aa5.58□□□□□ -1.52
CDH1-207ENST00000564745 HAS1Q92839 578 aa5.58□□□□□ -1.52
CDH1-207ENST00000564745 TRIM63Q969Q1 353 aa5.58□□□□□ -1.52
CDH1-207ENST00000564745 GCC1Q96CN9 775 aa5.58□□□□□ -1.52
CDH1-207ENST00000564745 WDYHV1Q96HA8 205 aa5.58□□□□□ -1.52
CDH1-207ENST00000564745 FBXL20Q96IG2 436 aa5.58□□□□□ -1.52
CDH1-207ENST00000564745 AIFM2Q9BRQ8 373 aa5.58□□□□□ -1.52
CDH1-207ENST00000564745 PRDM8Q9NQV8 689 aa5.58□□□□□ -1.52
CDH1-207ENST00000564745 HELLSQ9NRZ9 838 aa5.58□□□□□ -1.52
CDH1-207ENST00000564745 RRN3Q9NYV6 651 aa5.58□□□□□ -1.52
CDH1-207ENST00000564745 C9orf78Q9NZ63 289 aaPredicted RBP5.58□□□□□ -1.52
CDH1-207ENST00000564745 HERC5Q9UII4 1024 aaKnown RBP5.58□□□□□ -1.52
CDH1-207ENST00000564745 REXO2Q9Y3B8 237 aaKnown RBP5.58□□□□□ -1.52
CDH1-207ENST00000564745 PNMA6EA0A0J9YXQ4 647 aa5.57□□□□□ -1.52
CDH1-207ENST00000564745 PIPSLA2A3N6 862 aa5.57□□□□□ -1.52
CDH1-207ENST00000564745 WDR27A2RRH5 827 aa5.57□□□□□ -1.52
CDH1-207ENST00000564745 HMX3A6NHT5 357 aa5.57□□□□□ -1.52
CDH1-207ENST00000564745 SLC16A3O15427 465 aaKnown RBP5.57□□□□□ -1.52
CDH1-207ENST00000564745 PPFIA4O75335 1185 aa5.57□□□□□ -1.52
CDH1-207ENST00000564745 HSD3B1P14060 373 aa5.57□□□□□ -1.52
CDH1-207ENST00000564745 MAPK9P45984 424 aa5.57□□□□□ -1.52
CDH1-207ENST00000564745 CCT5P48643 541 aa5.57□□□□□ -1.52
CDH1-207ENST00000564745 MTHFSP49914 203 aa5.57□□□□□ -1.52
CDH1-207ENST00000564745 ARL4CP56559 192 aa5.57□□□□□ -1.52
CDH1-207ENST00000564745 NXPH1P58417 271 aa5.57□□□□□ -1.52
CDH1-207ENST00000564745 MTAPQ13126 283 aa5.57□□□□□ -1.52
CDH1-207ENST00000564745 FOXE3Q13461 319 aa5.57□□□□□ -1.52
CDH1-207ENST00000564745 TXNRD1Q16881 649 aa5.57□□□□□ -1.52
CDH1-207ENST00000564745 RINT1Q6NUQ1 792 aa5.57□□□□□ -1.52
CDH1-207ENST00000564745 RRAGAQ7L523 313 aa5.57□□□□□ -1.52
CDH1-207ENST00000564745 SLC44A2Q8IWA5 706 aaPredicted RBP5.57□□□□□ -1.52
CDH1-207ENST00000564745 CSGALNACT1Q8TDX6 532 aa5.57□□□□□ -1.52
CDH1-207ENST00000564745 XAGE5Q8WWM1 108 aa5.57□□□□□ -1.52
CDH1-207ENST00000564745 RUBCNQ92622 972 aa5.57□□□□□ -1.52
CDH1-207ENST00000564745 RFKQ969G6 155 aa5.57□□□□□ -1.52
CDH1-207ENST00000564745 RTKNQ9BST9 563 aa5.57□□□□□ -1.52
CDH1-207ENST00000564745 DAPP1Q9UN19 280 aa5.57□□□□□ -1.52
CDH1-207ENST00000564745 FAM90A18PA6NE21 464 aa5.56□□□□□ -1.52
CDH1-207ENST00000564745 FAM90A16PA6NEW6 464 aa5.56□□□□□ -1.52
CDH1-207ENST00000564745 FAM90A9PA6NNJ1 464 aa5.56□□□□□ -1.52
CDH1-207ENST00000564745 FAM90A5PA8MXJ8 464 aa5.56□□□□□ -1.52
CDH1-207ENST00000564745 EIF3FO00303 357 aaPredicted RBP5.56□□□□□ -1.52
CDH1-207ENST00000564745 PPP6R2O75170 966 aa5.56□□□□□ -1.52
CDH1-207ENST00000564745 RPP40O75818 363 aaKnown RBP5.56□□□□□ -1.52
CDH1-207ENST00000564745 CER1O95813 267 aa5.56□□□□□ -1.52
CDH1-207ENST00000564745 PEX11BO96011 259 aa5.56□□□□□ -1.52
CDH1-207ENST00000564745 FAM90A15PP0C7V4 464 aa5.56□□□□□ -1.52
CDH1-207ENST00000564745 FAM90A14PP0C7W9 464 aa5.56□□□□□ -1.52
CDH1-207ENST00000564745 JUPP14923 745 aa5.56□□□□□ -1.52
CDH1-207ENST00000564745 PCSK6P29122 969 aa5.56□□□□□ -1.52
CDH1-207ENST00000564745 PTGS2P35354 604 aa5.56□□□□□ -1.52
CDH1-207ENST00000564745 ZEB1P37275 1124 aaPredicted RBP5.56□□□□□ -1.52
CDH1-207ENST00000564745 AP2B1P63010 937 aa5.56□□□□□ -1.52
CDH1-207ENST00000564745 CUL4BQ13620 913 aa5.56□□□□□ -1.52
CDH1-207ENST00000564745 ACOX1Q15067 660 aa5.56□□□□□ -1.52
CDH1-207ENST00000564745 CYP1B1Q16678 543 aa5.56□□□□□ -1.52
CDH1-207ENST00000564745 TMEM196Q5HYL7 178 aa5.56□□□□□ -1.52
CDH1-207ENST00000564745 GRHL2Q6ISB3 625 aa5.56□□□□□ -1.52
CDH1-207ENST00000564745 MSANTD2Q6P1R3 559 aa5.56□□□□□ -1.52
CDH1-207ENST00000564745 LVRNQ6Q4G3 990 aa5.56□□□□□ -1.52
CDH1-207ENST00000564745 CCDC117Q8IWD4 279 aaPredicted RBP5.56□□□□□ -1.52
CDH1-207ENST00000564745 SLC44A3Q8N4M1 653 aa5.56□□□□□ -1.52
CDH1-207ENST00000564745 PGBD1Q96JS3 809 aa5.56□□□□□ -1.52
CDH1-207ENST00000564745 UBXN10Q96LJ8 280 aa5.56□□□□□ -1.52
CDH1-207ENST00000564745 PRR25Q96S07 402 aa5.56□□□□□ -1.52
CDH1-207ENST00000564745 KLC4Q9NSK0 619 aa5.56□□□□□ -1.52
CDH1-207ENST00000564745 ASAP1Q9ULH1 1129 aa5.56□□□□□ -1.52
CDH1-207ENST00000564745 GTF2A1LQ9UNN4 478 aa5.56□□□□□ -1.52
CDH1-207ENST00000564745 SALL3Q9BXA9 1300 aa5.55□□□□□ -1.52
CDH1-207ENST00000564745 KRTAP9-7A8MTY7 169 aa5.55□□□□□ -1.52
CDH1-207ENST00000564745 KIF28PB7ZC32 967 aa5.55□□□□□ -1.52
CDH1-207ENST00000564745 SPRY2O43597 315 aa5.55□□□□□ -1.52
CDH1-207ENST00000564745 PEX1O43933 1283 aa5.55□□□□□ -1.52
CDH1-207ENST00000564745 WDR47O94967 919 aa5.55□□□□□ -1.52
CDH1-207ENST00000564745 AGR2O95994 175 aa5.55□□□□□ -1.52
CDH1-207ENST00000564745 PYGLP06737 847 aa5.55□□□□□ -1.52
CDH1-207ENST00000564745 NR2F6P10588 404 aa5.55□□□□□ -1.52
CDH1-207ENST00000564745 CKMT1AP12532 417 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms