RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 SNX30Q5VWJ9 437 aa10.47□□□□□ -0.73
CDH1-206ENST00000564676 TRIM68Q6AZZ1 485 aa10.47□□□□□ -0.73
CDH1-206ENST00000564676 LCLAT1Q6UWP7 414 aa10.47□□□□□ -0.73
CDH1-206ENST00000564676 ANKRD20A12PQ8NF67 263 aa10.47□□□□□ -0.73
CDH1-206ENST00000564676 PJA1Q8NG27 643 aa10.47□□□□□ -0.73
CDH1-206ENST00000564676 RIN3Q8TB24 985 aa10.47□□□□□ -0.73
CDH1-206ENST00000564676 FAM3CQ92520 227 aa10.47□□□□□ -0.73
CDH1-206ENST00000564676 PRRX2Q99811 253 aa10.47□□□□□ -0.73
CDH1-206ENST00000564676 FAM83CQ9BQN1 747 aa10.47□□□□□ -0.73
CDH1-206ENST00000564676 DDX23Q9BUQ8 820 aaKnown RBP10.47□□□□□ -0.73
CDH1-206ENST00000564676 TMEM121BQ9BXQ6 578 aaPredicted RBP10.47□□□□□ -0.73
CDH1-206ENST00000564676 VPS16Q9H269 839 aa10.47□□□□□ -0.73
CDH1-206ENST00000564676 EBF3Q9H4W6 596 aa10.47□□□□□ -0.73
CDH1-206ENST00000564676 CCSER2Q9H7U1 834 aa10.47□□□□□ -0.73
CDH1-206ENST00000564676 LTB4R2Q9NPC1 389 aa10.47□□□□□ -0.73
CDH1-206ENST00000564676 NAGPAQ9UK23 515 aa10.47□□□□□ -0.73
CDH1-206ENST00000564676 DNAJC12Q9UKB3 198 aa10.47□□□□□ -0.73
CDH1-206ENST00000564676 NDRG2Q9UN36 371 aaKnown RBP10.47□□□□□ -0.73
CDH1-206ENST00000564676 MTF2Q9Y483 593 aaPredicted RBP10.47□□□□□ -0.73
CDH1-206ENST00000564676 A0A1W2PQH9 124 aa10.46□□□□□ -0.73
CDH1-206ENST00000564676 SPECC1L-ADORA2AF8WAN1 911 aa10.46□□□□□ -0.73
CDH1-206ENST00000564676 TULP2O00295 520 aa10.46□□□□□ -0.73
CDH1-206ENST00000564676 MED7O43513 233 aa10.46□□□□□ -0.73
CDH1-206ENST00000564676 LETM1O95202 739 aaPredicted RBP10.46□□□□□ -0.73
CDH1-206ENST00000564676 SETSIPP0DME0 302 aa10.46□□□□□ -0.73
CDH1-206ENST00000564676 RALAP11233 206 aa10.46□□□□□ -0.73
CDH1-206ENST00000564676 RARGP13631 454 aa10.46□□□□□ -0.73
CDH1-206ENST00000564676 ARSAP15289 507 aa10.46□□□□□ -0.73
CDH1-206ENST00000564676 TCF3P15923 654 aa10.46□□□□□ -0.73
CDH1-206ENST00000564676 TARSP26639 723 aaKnown RBP10.46□□□□□ -0.73
CDH1-206ENST00000564676 ATP5C1P36542 298 aaKnown RBP10.46□□□□□ -0.73
CDH1-206ENST00000564676 SOX9P48436 509 aa10.46□□□□□ -0.73
CDH1-206ENST00000564676 PGFP49763 221 aa10.46□□□□□ -0.73
CDH1-206ENST00000564676 TKTL1P51854 596 aa10.46□□□□□ -0.73
CDH1-206ENST00000564676 ZNF132P52740 706 aa10.46□□□□□ -0.73
CDH1-206ENST00000564676 KRT31Q15323 416 aa10.46□□□□□ -0.73
CDH1-206ENST00000564676 KLHL40Q2TBA0 621 aa10.46□□□□□ -0.73
CDH1-206ENST00000564676 ANO6Q4KMQ2 910 aa10.46□□□□□ -0.73
CDH1-206ENST00000564676 CDKAL1Q5VV42 579 aa10.46□□□□□ -0.73
CDH1-206ENST00000564676 C1orf228Q6PIY5 440 aa10.46□□□□□ -0.73
CDH1-206ENST00000564676 CCDC186Q7Z3E2 898 aa10.46□□□□□ -0.73
CDH1-206ENST00000564676 TADA2BQ86TJ2 420 aa10.46□□□□□ -0.73
CDH1-206ENST00000564676 RALGPS2Q86X27 583 aaPredicted RBP10.46□□□□□ -0.73
CDH1-206ENST00000564676 DDX42Q86XP3 938 aaKnown RBP eCLIP10.46□□□□□ -0.73
CDH1-206ENST00000564676 DTWD2Q8NBA8 298 aa10.46□□□□□ -0.73
CDH1-206ENST00000564676 OSCP1Q8WVF1 389 aa10.46□□□□□ -0.73
CDH1-206ENST00000564676 SECISBP2LQ93073 1101 aaKnown RBP10.46□□□□□ -0.73
CDH1-206ENST00000564676 MSANTD3Q96H12 275 aa10.46□□□□□ -0.73
CDH1-206ENST00000564676 ZSWIM1Q9BR11 485 aa10.46□□□□□ -0.73
CDH1-206ENST00000564676 LSM14BQ9BX40 385 aaKnown RBP10.46□□□□□ -0.73
CDH1-206ENST00000564676 OSBPL6Q9BZF3 934 aa10.46□□□□□ -0.73
CDH1-206ENST00000564676 ULBP1Q9BZM6 244 aa10.46□□□□□ -0.73
CDH1-206ENST00000564676 KCNH6Q9H252 994 aa10.46□□□□□ -0.73
CDH1-206ENST00000564676 NMUR1Q9HB89 426 aa10.46□□□□□ -0.73
CDH1-206ENST00000564676 HPS4Q9NQG7 708 aa10.46□□□□□ -0.73
CDH1-206ENST00000564676 CFAP97Q9P2B7 532 aa10.46□□□□□ -0.73
CDH1-206ENST00000564676 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.46□□□□□ -0.73
CDH1-206ENST00000564676 CNTN6Q9UQ52 1028 aa10.46□□□□□ -0.73
CDH1-206ENST00000564676 SH3BP1Q9Y3L3 701 aa10.46□□□□□ -0.73
CDH1-206ENST00000564676 WNT6Q9Y6F9 365 aa10.46□□□□□ -0.73
CDH1-206ENST00000564676 USP3Q9Y6I4 520 aa10.46□□□□□ -0.73
CDH1-206ENST00000564676 MYO16Q9Y6X6 1858 aa10.45□□□□□ -0.74
CDH1-206ENST00000564676 PATJQ8NI35 1801 aa10.45□□□□□ -0.74
CDH1-206ENST00000564676 SLC9A3R1O14745 358 aaPredicted RBP10.45□□□□□ -0.74
CDH1-206ENST00000564676 SCAMP3O14828 347 aaKnown RBP10.45□□□□□ -0.74
CDH1-206ENST00000564676 THAP12O43422 761 aa10.45□□□□□ -0.74
CDH1-206ENST00000564676 TBX18O95935 607 aa10.45□□□□□ -0.74
CDH1-206ENST00000564676 ZBED1O96006 694 aa10.45□□□□□ -0.74
CDH1-206ENST00000564676 LCP1P13796 627 aa10.45□□□□□ -0.74
CDH1-206ENST00000564676 GNA15P30679 374 aa10.45□□□□□ -0.74
CDH1-206ENST00000564676 CTHP32929 405 aa10.45□□□□□ -0.74
CDH1-206ENST00000564676 PLA2G4AP47712 749 aa10.45□□□□□ -0.74
CDH1-206ENST00000564676 RGS7P49802 495 aa10.45□□□□□ -0.74
CDH1-206ENST00000564676 MLLT6P55198 1093 aaPredicted RBP10.45□□□□□ -0.74
CDH1-206ENST00000564676 ZXDBP98169 803 aa10.45□□□□□ -0.74
CDH1-206ENST00000564676 AMPD2Q01433 879 aa10.45□□□□□ -0.74
CDH1-206ENST00000564676 GOLGA8FQ08AF8 430 aa10.45□□□□□ -0.74
CDH1-206ENST00000564676 GOLGA8DPQ0D2H9 430 aa10.45□□□□□ -0.74
CDH1-206ENST00000564676 ADIGQ0VDE8 80 aa10.45□□□□□ -0.74
CDH1-206ENST00000564676 KCNMA1Q12791 1236 aa10.45□□□□□ -0.74
CDH1-206ENST00000564676 NR1H3Q13133 447 aa10.45□□□□□ -0.74
CDH1-206ENST00000564676 PKDCCQ504Y2 493 aa10.45□□□□□ -0.74
CDH1-206ENST00000564676 RAB41Q5JT25 222 aa10.45□□□□□ -0.74
CDH1-206ENST00000564676 C10orf120Q5SQS8 335 aa10.45□□□□□ -0.74
CDH1-206ENST00000564676 FKBP15Q5T1M5 1219 aa10.45□□□□□ -0.74
CDH1-206ENST00000564676 SCD5Q86SK9 330 aa10.45□□□□□ -0.74
CDH1-206ENST00000564676 CCDC105Q8IYK2 499 aa10.45□□□□□ -0.74
CDH1-206ENST00000564676 SIX6OS1Q8N1H7 587 aa10.45□□□□□ -0.74
CDH1-206ENST00000564676 ARHGAP18Q8N392 663 aa10.45□□□□□ -0.74
CDH1-206ENST00000564676 CPA6Q8N4T0 437 aa10.45□□□□□ -0.74
CDH1-206ENST00000564676 AOPEPQ8N6M6 819 aa10.45□□□□□ -0.74
CDH1-206ENST00000564676 ATP2A3Q93084 1043 aa10.45□□□□□ -0.74
CDH1-206ENST00000564676 LINC00597Q9H2U6 94 aa10.45□□□□□ -0.74
CDH1-206ENST00000564676 ECT2Q9H8V3 914 aa10.45□□□□□ -0.74
CDH1-206ENST00000564676 SIX2Q9NPC8 291 aa10.45□□□□□ -0.74
CDH1-206ENST00000564676 CYLDQ9NQC7 956 aa10.45□□□□□ -0.74
CDH1-206ENST00000564676 OSER1Q9NX31 292 aa10.45□□□□□ -0.74
CDH1-206ENST00000564676 NUDT5Q9UKK9 219 aa10.45□□□□□ -0.74
CDH1-206ENST00000564676 MIA3Q5JRA6 1907 aa10.45□□□□□ -0.74
CDH1-206ENST00000564676 KMT2EQ8IZD2 1858 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms