RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 COL11A2P13942 1736 aaPredicted RBP3.5□□□□□ -1.85
CHD9-207ENST00000562806 LRRC3CA6NJW4 275 aa3.5□□□□□ -1.85
CHD9-207ENST00000562806 RASA4BC9J798 803 aa3.5□□□□□ -1.85
CHD9-207ENST00000562806 OVOL3O00110 214 aa3.5□□□□□ -1.85
CHD9-207ENST00000562806 MASP2O00187 686 aa3.5□□□□□ -1.85
CHD9-207ENST00000562806 AP4M1O00189 453 aa3.5□□□□□ -1.85
CHD9-207ENST00000562806 EXOC5O00471 708 aa3.5□□□□□ -1.85
CHD9-207ENST00000562806 APAF1O14727 1248 aa3.5□□□□□ -1.85
CHD9-207ENST00000562806 APOL1O14791 398 aa3.5□□□□□ -1.85
CHD9-207ENST00000562806 KPNA5O15131 536 aa3.5□□□□□ -1.85
CHD9-207ENST00000562806 RASA4O43374 803 aa3.5□□□□□ -1.85
CHD9-207ENST00000562806 USP1O94782 785 aa3.5□□□□□ -1.85
CHD9-207ENST00000562806 CREB1P16220 341 aa3.5□□□□□ -1.85
CHD9-207ENST00000562806 TSHRP16473 764 aa3.5□□□□□ -1.85
CHD9-207ENST00000562806 ADRA1DP25100 572 aa3.5□□□□□ -1.85
CHD9-207ENST00000562806 CTGFP29279 349 aa3.5□□□□□ -1.85
CHD9-207ENST00000562806 TM4SF4P48230 202 aa3.5□□□□□ -1.85
CHD9-207ENST00000562806 C21orf58P58505 322 aa3.5□□□□□ -1.85
CHD9-207ENST00000562806 TUBA4AP68366 448 aa3.5□□□□□ -1.85
CHD9-207ENST00000562806 MRPS21P82921 87 aaKnown RBP3.5□□□□□ -1.85
CHD9-207ENST00000562806 E2F1Q01094 437 aa3.5□□□□□ -1.85
CHD9-207ENST00000562806 GRM1Q13255 1194 aa3.5□□□□□ -1.85
CHD9-207ENST00000562806 CYP1B1Q16678 543 aa3.5□□□□□ -1.85
CHD9-207ENST00000562806 LY6KQ17RY6 165 aa3.5□□□□□ -1.85
CHD9-207ENST00000562806 ARL13BQ3SXY8 428 aa3.5□□□□□ -1.85
CHD9-207ENST00000562806 FAXCQ5TGI0 409 aa3.5□□□□□ -1.85
CHD9-207ENST00000562806 MANEALQ5VSG8 457 aa3.5□□□□□ -1.85
CHD9-207ENST00000562806 IZUMO3Q5VZ72 239 aa3.5□□□□□ -1.85
CHD9-207ENST00000562806 ARL6IP4Q66PJ3 421 aaKnown RBP3.5□□□□□ -1.85
CHD9-207ENST00000562806 AMIGO2Q86SJ2 522 aa3.5□□□□□ -1.85
CHD9-207ENST00000562806 TTC30AQ86WT1 665 aa3.5□□□□□ -1.85
CHD9-207ENST00000562806 PMM1Q92871 262 aa3.5□□□□□ -1.85
CHD9-207ENST00000562806 CCDC17Q96LX7 622 aa3.5□□□□□ -1.85
CHD9-207ENST00000562806 PRR25Q96S07 402 aa3.5□□□□□ -1.85
CHD9-207ENST00000562806 TBCBQ99426 244 aa3.5□□□□□ -1.85
CHD9-207ENST00000562806 CINPQ9BW66 212 aaPredicted RBP3.5□□□□□ -1.85
CHD9-207ENST00000562806 SLC25A32Q9H2D1 315 aa3.5□□□□□ -1.85
CHD9-207ENST00000562806 PRDM13Q9H4Q3 707 aa3.5□□□□□ -1.85
CHD9-207ENST00000562806 ADARB2Q9NS39 739 aaKnown RBP3.5□□□□□ -1.85
CHD9-207ENST00000562806 TM7SF3Q9NS93 570 aa3.5□□□□□ -1.85
CHD9-207ENST00000562806 RXFP3Q9NSD7 469 aa3.5□□□□□ -1.85
CHD9-207ENST00000562806 CA14Q9ULX7 337 aa3.5□□□□□ -1.85
CHD9-207ENST00000562806 CEP83Q9Y592 693 aa3.5□□□□□ -1.85
CHD9-207ENST00000562806 COL15A1P39059 1388 aa3.5□□□□□ -1.85
CHD9-207ENST00000562806 AOX1Q06278 1338 aa3.49□□□□□ -1.85
CHD9-207ENST00000562806 F8W8V4 182 aa3.49□□□□□ -1.85
CHD9-207ENST00000562806 ZNF213O14771 459 aa3.49□□□□□ -1.85
CHD9-207ENST00000562806 RBMXL2O75526 392 aaKnown RBP3.49□□□□□ -1.85
CHD9-207ENST00000562806 FGF18O76093 207 aa3.49□□□□□ -1.85
CHD9-207ENST00000562806 MT-CO3P00414 261 aa3.49□□□□□ -1.85
CHD9-207ENST00000562806 CDK4P11802 303 aa3.49□□□□□ -1.85
CHD9-207ENST00000562806 HGFP14210 728 aa3.49□□□□□ -1.85
CHD9-207ENST00000562806 PTH2RP49190 550 aa3.49□□□□□ -1.85
CHD9-207ENST00000562806 PRIM2P49643 509 aa3.49□□□□□ -1.85
CHD9-207ENST00000562806 ITGA8P53708 1063 aa3.49□□□□□ -1.85
CHD9-207ENST00000562806 EIF4A1P60842 406 aaKnown RBP3.49□□□□□ -1.85
CHD9-207ENST00000562806 KIRREL2Q6UWL6 708 aa3.49□□□□□ -1.85
CHD9-207ENST00000562806 VSTM1Q6UX27 236 aa3.49□□□□□ -1.85
CHD9-207ENST00000562806 SERPINA13PQ6UXR4 307 aa3.49□□□□□ -1.85
CHD9-207ENST00000562806 NAPRTQ6XQN6 538 aa3.49□□□□□ -1.85
CHD9-207ENST00000562806 KCTD20Q7Z5Y7 419 aa3.49□□□□□ -1.85
CHD9-207ENST00000562806 TXLNBQ8N3L3 684 aa3.49□□□□□ -1.85
CHD9-207ENST00000562806 RNF152Q8N8N0 203 aa3.49□□□□□ -1.85
CHD9-207ENST00000562806 PNPLA1Q8N8W4 532 aa3.49□□□□□ -1.85
CHD9-207ENST00000562806 REPS1Q96D71 796 aa3.49□□□□□ -1.85
CHD9-207ENST00000562806 CCDC138Q96M89 665 aa3.49□□□□□ -1.85
CHD9-207ENST00000562806 LENG8Q96PV6 779 aaPredicted RBP3.49□□□□□ -1.85
CHD9-207ENST00000562806 ASB2Q96Q27 587 aa3.49□□□□□ -1.85
CHD9-207ENST00000562806 NUDT22Q9BRQ3 303 aa3.49□□□□□ -1.85
CHD9-207ENST00000562806 SELENOOQ9BVL4 669 aa3.49□□□□□ -1.85
CHD9-207ENST00000562806 NAA15Q9BXJ9 866 aaKnown RBP3.49□□□□□ -1.85
CHD9-207ENST00000562806 CIPCQ9C0C6 399 aa3.49□□□□□ -1.85
CHD9-207ENST00000562806 VPS51Q9UID3 782 aa3.49□□□□□ -1.85
CHD9-207ENST00000562806 ADAM21Q9UKJ8 722 aa3.49□□□□□ -1.85
CHD9-207ENST00000562806 H3BNC9 293 aa3.48□□□□□ -1.85
CHD9-207ENST00000562806 EXOC3O60645 756 aa3.48□□□□□ -1.85
CHD9-207ENST00000562806 USP12O75317 370 aa3.48□□□□□ -1.85
CHD9-207ENST00000562806 GCATO75600 419 aa3.48□□□□□ -1.85
CHD9-207ENST00000562806 RNF8O76064 485 aa3.48□□□□□ -1.85
CHD9-207ENST00000562806 IFIT2P09913 472 aaKnown RBP3.48□□□□□ -1.85
CHD9-207ENST00000562806 TMEM225BP0DP42 221 aa3.48□□□□□ -1.85
CHD9-207ENST00000562806 ZNF37AP17032 561 aaPredicted RBP3.48□□□□□ -1.85
CHD9-207ENST00000562806 MMP8P22894 467 aa3.48□□□□□ -1.85
CHD9-207ENST00000562806 ATICP31939 592 aa3.48□□□□□ -1.85
CHD9-207ENST00000562806 CYP4F2P78329 520 aa3.48□□□□□ -1.85
CHD9-207ENST00000562806 TXNL4AP83876 142 aaKnown RBP3.48□□□□□ -1.85
CHD9-207ENST00000562806 CFHR3Q02985 330 aa3.48□□□□□ -1.85
CHD9-207ENST00000562806 FOXF2Q12947 444 aa3.48□□□□□ -1.85
CHD9-207ENST00000562806 LONRF1Q17RB8 773 aa3.48□□□□□ -1.85
CHD9-207ENST00000562806 SLC5A9Q2M3M2 681 aa3.48□□□□□ -1.85
CHD9-207ENST00000562806 PROSER3Q2NL68 480 aa3.48□□□□□ -1.85
CHD9-207ENST00000562806 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.48□□□□□ -1.85
CHD9-207ENST00000562806 FAM209BQ5JX69 171 aa3.48□□□□□ -1.85
CHD9-207ENST00000562806 DGKKQ5KSL6 1271 aa3.48□□□□□ -1.85
CHD9-207ENST00000562806 PRAMEF17Q5VTA0 474 aa3.48□□□□□ -1.85
CHD9-207ENST00000562806 FAM186BQ8IYM0 893 aa3.48□□□□□ -1.85
CHD9-207ENST00000562806 FSTL5Q8N475 847 aaPredicted RBP3.48□□□□□ -1.85
CHD9-207ENST00000562806 OR2C3Q8N628 320 aa3.48□□□□□ -1.85
CHD9-207ENST00000562806 C12orf76Q8N812 135 aaPredicted RBP3.48□□□□□ -1.85
CHD9-207ENST00000562806 SVIPQ8NHG7 77 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms