RNA–Protein interactions for RNA: ENST00000562404.1

LPCAT4-202, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 3

Gene LPCAT4, Length 577 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-202ENST00000562404 SRRTQ9BXP5 876 aaKnown RBP11.71□□□□□ -0.53
LPCAT4-202ENST00000562404 METTL14Q9HCE5 456 aaKnown RBP11.71□□□□□ -0.53
LPCAT4-202ENST00000562404 COMMD8Q9NX08 183 aa11.71□□□□□ -0.53
LPCAT4-202ENST00000562404 SCML2Q9UQR0 700 aa11.71□□□□□ -0.53
LPCAT4-202ENST00000562404 SPAG17Q6Q759 2223 aa11.71□□□□□ -0.54
LPCAT4-202ENST00000562404 SDK1Q7Z5N4 2213 aa11.71□□□□□ -0.54
LPCAT4-202ENST00000562404 DNAH14Q0VDD8 3507 aa11.7□□□□□ -0.54
LPCAT4-202ENST00000562404 DMXL1Q9Y485 3027 aa11.7□□□□□ -0.54
LPCAT4-202ENST00000562404 A0A1W2PQH9 124 aa11.7□□□□□ -0.54
LPCAT4-202ENST00000562404 PMM2O15305 246 aa11.7□□□□□ -0.54
LPCAT4-202ENST00000562404 TLR5O60602 858 aa11.7□□□□□ -0.54
LPCAT4-202ENST00000562404 RNF40O75150 1001 aa11.7□□□□□ -0.54
LPCAT4-202ENST00000562404 LMNAP02545 664 aaKnown RBP11.7□□□□□ -0.54
LPCAT4-202ENST00000562404 IRF1P10914 325 aa11.7□□□□□ -0.54
LPCAT4-202ENST00000562404 CXCL12P48061 93 aa11.7□□□□□ -0.54
LPCAT4-202ENST00000562404 SLC6A11P48066 632 aa11.7□□□□□ -0.54
LPCAT4-202ENST00000562404 PDE6CP51160 858 aa11.7□□□□□ -0.54
LPCAT4-202ENST00000562404 CCR3P51677 355 aa11.7□□□□□ -0.54
LPCAT4-202ENST00000562404 MARSP56192 900 aaKnown RBP11.7□□□□□ -0.54
LPCAT4-202ENST00000562404 DHCR24Q15392 516 aa11.7□□□□□ -0.54
LPCAT4-202ENST00000562404 RHBDF2Q6PJF5 856 aa11.7□□□□□ -0.54
LPCAT4-202ENST00000562404 BHLHA9Q7RTU4 235 aa11.7□□□□□ -0.54
LPCAT4-202ENST00000562404 PIGZQ86VD9 579 aa11.7□□□□□ -0.54
LPCAT4-202ENST00000562404 IRF2BP1Q8IU81 584 aa11.7□□□□□ -0.54
LPCAT4-202ENST00000562404 CPA6Q8N4T0 437 aa11.7□□□□□ -0.54
LPCAT4-202ENST00000562404 DCLK2Q8N568 766 aa11.7□□□□□ -0.54
LPCAT4-202ENST00000562404 TRIML1Q8N9V2 468 aa11.7□□□□□ -0.54
LPCAT4-202ENST00000562404 TFAP2BQ92481 460 aa11.7□□□□□ -0.54
LPCAT4-202ENST00000562404 NDRG1Q92597 394 aaKnown RBP11.7□□□□□ -0.54
LPCAT4-202ENST00000562404 CD101Q93033 1021 aa11.7□□□□□ -0.54
LPCAT4-202ENST00000562404 P2RY11Q96G91 374 aa11.7□□□□□ -0.54
LPCAT4-202ENST00000562404 KLF16Q9BXK1 252 aaPredicted RBP11.7□□□□□ -0.54
LPCAT4-202ENST00000562404 FBXO44Q9H4M3 255 aa11.7□□□□□ -0.54
LPCAT4-202ENST00000562404 PNPLA8Q9NP80 782 aa11.7□□□□□ -0.54
LPCAT4-202ENST00000562404 ZSCAN32Q9NX65 697 aa11.7□□□□□ -0.54
LPCAT4-202ENST00000562404 USP3Q9Y6I4 520 aa11.7□□□□□ -0.54
LPCAT4-202ENST00000562404 RALGAPA1Q6GYQ0 2036 aa11.7□□□□□ -0.54
LPCAT4-202ENST00000562404 SPTBN4Q9H254 2564 aa11.7□□□□□ -0.54
LPCAT4-202ENST00000562404 BICDL2A1A5D9 508 aa11.69□□□□□ -0.54
LPCAT4-202ENST00000562404 CHURC1-FNTBB4DL54 471 aa11.69□□□□□ -0.54
LPCAT4-202ENST00000562404 GABBR2O75899 941 aa11.69□□□□□ -0.54
LPCAT4-202ENST00000562404 PAPSS2O95340 614 aaPredicted RBP11.69□□□□□ -0.54
LPCAT4-202ENST00000562404 NFATC1O95644 943 aa11.69□□□□□ -0.54
LPCAT4-202ENST00000562404 CHRM1P11229 460 aaPredicted RBP11.69□□□□□ -0.54
LPCAT4-202ENST00000562404 FNTBP49356 437 aa11.69□□□□□ -0.54
LPCAT4-202ENST00000562404 TUBP50607 506 aa11.69□□□□□ -0.54
LPCAT4-202ENST00000562404 APBA1Q02410 837 aa11.69□□□□□ -0.54
LPCAT4-202ENST00000562404 PDE4CQ08493 712 aa11.69□□□□□ -0.54
LPCAT4-202ENST00000562404 GRSF1Q12849 480 aaKnown RBP eCLIP11.69□□□□□ -0.54
LPCAT4-202ENST00000562404 SRSF5Q13243 272 aaKnown RBP11.69□□□□□ -0.54
LPCAT4-202ENST00000562404 GOLGA7BQ2TAP0 167 aa11.69□□□□□ -0.54
LPCAT4-202ENST00000562404 RAB41Q5JT25 222 aa11.69□□□□□ -0.54
LPCAT4-202ENST00000562404 RRAGAQ7L523 313 aa11.69□□□□□ -0.54
LPCAT4-202ENST00000562404 CCDC186Q7Z3E2 898 aa11.69□□□□□ -0.54
LPCAT4-202ENST00000562404 BBS7Q8IWZ6 715 aa11.69□□□□□ -0.54
LPCAT4-202ENST00000562404 KREMEN1Q96MU8 473 aa11.69□□□□□ -0.54
LPCAT4-202ENST00000562404 IER2Q9BTL4 223 aa11.69□□□□□ -0.54
LPCAT4-202ENST00000562404 CLSTN2Q9H4D0 955 aa11.69□□□□□ -0.54
LPCAT4-202ENST00000562404 CYLDQ9NQC7 956 aa11.69□□□□□ -0.54
LPCAT4-202ENST00000562404 TLR8Q9NR97 1041 aaKnown RBP11.69□□□□□ -0.54
LPCAT4-202ENST00000562404 LMBRD1Q9NUN5 540 aa11.69□□□□□ -0.54
LPCAT4-202ENST00000562404 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.69□□□□□ -0.54
LPCAT4-202ENST00000562404 TSPAN16Q9UKR8 245 aa11.69□□□□□ -0.54
LPCAT4-202ENST00000562404 PCDHGA2Q9Y5H1 932 aa11.69□□□□□ -0.54
LPCAT4-202ENST00000562404 E2F8A0AVK6 867 aa11.68□□□□□ -0.54
LPCAT4-202ENST00000562404 K7EQS6 105 aa11.68□□□□□ -0.54
LPCAT4-202ENST00000562404 O00370 1275 aa11.68□□□□□ -0.54
LPCAT4-202ENST00000562404 RARGP13631 454 aa11.68□□□□□ -0.54
LPCAT4-202ENST00000562404 ANP32AP39687 249 aaKnown RBP11.68□□□□□ -0.54
LPCAT4-202ENST00000562404 PXNP49023 591 aaPredicted RBP11.68□□□□□ -0.54
LPCAT4-202ENST00000562404 PKDCCQ504Y2 493 aa11.68□□□□□ -0.54
LPCAT4-202ENST00000562404 LY6G5CQ5SRR4 150 aa11.68□□□□□ -0.54
LPCAT4-202ENST00000562404 HEATR6Q6AI08 1181 aaKnown RBP11.68□□□□□ -0.54
LPCAT4-202ENST00000562404 ZC3H14Q6PJT7 736 aaKnown RBP11.68□□□□□ -0.54
LPCAT4-202ENST00000562404 TMEM270Q6UE05 265 aa11.68□□□□□ -0.54
LPCAT4-202ENST00000562404 CLEC17AQ6ZS10 378 aa11.68□□□□□ -0.54
LPCAT4-202ENST00000562404 PPM1KQ8N3J5 372 aa11.68□□□□□ -0.54
LPCAT4-202ENST00000562404 SYNPOQ8N3V7 929 aa11.68□□□□□ -0.54
LPCAT4-202ENST00000562404 ANKRD52Q8NB46 1076 aa11.68□□□□□ -0.54
LPCAT4-202ENST00000562404 EHBP1Q8NDI1 1231 aa11.68□□□□□ -0.54
LPCAT4-202ENST00000562404 UBA3Q8TBC4 463 aa11.68□□□□□ -0.54
LPCAT4-202ENST00000562404 NT5C1BQ96P26 610 aa11.68□□□□□ -0.54
LPCAT4-202ENST00000562404 RWDD2AQ9UIY3 292 aa11.68□□□□□ -0.54
LPCAT4-202ENST00000562404 TRIM24O15164 1050 aa11.67□□□□□ -0.54
LPCAT4-202ENST00000562404 P4HA2O15460 535 aa11.67□□□□□ -0.54
LPCAT4-202ENST00000562404 HRO43593 1189 aa11.67□□□□□ -0.54
LPCAT4-202ENST00000562404 AFPP02771 609 aaKnown RBP11.67□□□□□ -0.54
LPCAT4-202ENST00000562404 CD19P15391 556 aa11.67□□□□□ -0.54
LPCAT4-202ENST00000562404 DRD1P21728 446 aa11.67□□□□□ -0.54
LPCAT4-202ENST00000562404 TBXAS1P24557 533 aaPredicted RBP11.67□□□□□ -0.54
LPCAT4-202ENST00000562404 BRD2P25440 801 aaKnown RBP11.67□□□□□ -0.54
LPCAT4-202ENST00000562404 ATP5C1P36542 298 aaKnown RBP11.67□□□□□ -0.54
LPCAT4-202ENST00000562404 LPAL2Q16609 132 aa11.67□□□□□ -0.54
LPCAT4-202ENST00000562404 DPCR1Q3MIW9 517 aa11.67□□□□□ -0.54
LPCAT4-202ENST00000562404 SGO2Q562F6 1265 aa11.67□□□□□ -0.54
LPCAT4-202ENST00000562404 GJB7Q6PEY0 223 aa11.67□□□□□ -0.54
LPCAT4-202ENST00000562404 DDX42Q86XP3 938 aaKnown RBP eCLIP11.67□□□□□ -0.54
LPCAT4-202ENST00000562404 TMEM25Q86YD3 366 aa11.67□□□□□ -0.54
LPCAT4-202ENST00000562404 ABCA7Q8IZY2 2146 aa11.67□□□□□ -0.54
LPCAT4-202ENST00000562404 PHTF2Q8N3S3 785 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms