RNA–Protein interactions for RNA: ENST00000560987.5

SNRPA1-214, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-214ENST00000560987 KLHDC7AQ5VTJ3 777 aa9.5□□□□□ -0.89
SNRPA1-214ENST00000560987 BTBD8Q5XKL5 378 aa9.5□□□□□ -0.89
SNRPA1-214ENST00000560987 ZNF852Q6ZMS4 543 aa9.5□□□□□ -0.89
SNRPA1-214ENST00000560987 TPRG1Q6ZUI0 275 aa9.5□□□□□ -0.89
SNRPA1-214ENST00000560987 RSRC2Q7L4I2 434 aaKnown RBP9.5□□□□□ -0.89
SNRPA1-214ENST00000560987 TADA2BQ86TJ2 420 aa9.5□□□□□ -0.89
SNRPA1-214ENST00000560987 SIX6OS1Q8N1H7 587 aa9.5□□□□□ -0.89
SNRPA1-214ENST00000560987 ARHGAP18Q8N392 663 aa9.5□□□□□ -0.89
SNRPA1-214ENST00000560987 UBR7Q8N806 425 aa9.5□□□□□ -0.89
SNRPA1-214ENST00000560987 NEK11Q8NG66 645 aa9.5□□□□□ -0.89
SNRPA1-214ENST00000560987 ZNF606Q8WXB4 792 aa9.5□□□□□ -0.89
SNRPA1-214ENST00000560987 NDRG1Q92597 394 aaKnown RBP9.5□□□□□ -0.89
SNRPA1-214ENST00000560987 SECISBP2LQ93073 1101 aaKnown RBP9.5□□□□□ -0.89
SNRPA1-214ENST00000560987 LRRC3BQ96PB8 259 aa9.5□□□□□ -0.89
SNRPA1-214ENST00000560987 BPIFA3Q9BQP9 254 aa9.5□□□□□ -0.89
SNRPA1-214ENST00000560987 CCSER2Q9H7U1 834 aa9.5□□□□□ -0.89
SNRPA1-214ENST00000560987 TBC1D17Q9HA65 648 aa9.5□□□□□ -0.89
SNRPA1-214ENST00000560987 PNPLA8Q9NP80 782 aa9.5□□□□□ -0.89
SNRPA1-214ENST00000560987 ST7Q9NRC1 585 aa9.5□□□□□ -0.89
SNRPA1-214ENST00000560987 GTSE1Q9NYZ3 720 aa9.5□□□□□ -0.89
SNRPA1-214ENST00000560987 LIMA1Q9UHB6 759 aaKnown RBP9.5□□□□□ -0.89
SNRPA1-214ENST00000560987 NUDT5Q9UKK9 219 aa9.5□□□□□ -0.89
SNRPA1-214ENST00000560987 NDRG2Q9UN36 371 aaKnown RBP9.5□□□□□ -0.89
SNRPA1-214ENST00000560987 MRPS17Q9Y2R5 130 aaKnown RBP9.5□□□□□ -0.89
SNRPA1-214ENST00000560987 SIT1Q9Y3P8 196 aa9.5□□□□□ -0.89
SNRPA1-214ENST00000560987 CPQQ9Y646 472 aa9.5□□□□□ -0.89
SNRPA1-214ENST00000560987 PTPRDP23468 1912 aa9.5□□□□□ -0.89
SNRPA1-214ENST00000560987 GREB1Q4ZG55 1949 aa9.5□□□□□ -0.89
SNRPA1-214ENST00000560987 TULP2O00295 520 aa9.49□□□□□ -0.89
SNRPA1-214ENST00000560987 MAN2B1O00754 1011 aa9.49□□□□□ -0.89
SNRPA1-214ENST00000560987 NCAM2O15394 837 aa9.49□□□□□ -0.89
SNRPA1-214ENST00000560987 COCHO43405 550 aa9.49□□□□□ -0.89
SNRPA1-214ENST00000560987 TLR5O60602 858 aa9.49□□□□□ -0.89
SNRPA1-214ENST00000560987 TBX18O95935 607 aa9.49□□□□□ -0.89
SNRPA1-214ENST00000560987 ZBED1O96006 694 aa9.49□□□□□ -0.89
SNRPA1-214ENST00000560987 SETSIPP0DME0 302 aa9.49□□□□□ -0.89
SNRPA1-214ENST00000560987 PSEN1P49768 467 aa9.49□□□□□ -0.89
SNRPA1-214ENST00000560987 CLCN5P51795 746 aa9.49□□□□□ -0.89
SNRPA1-214ENST00000560987 POLR2FP61218 127 aaKnown RBP9.49□□□□□ -0.89
SNRPA1-214ENST00000560987 YWHAGP61981 247 aaKnown RBP eCLIP9.49□□□□□ -0.89
SNRPA1-214ENST00000560987 PRKCQQ04759 706 aa9.49□□□□□ -0.89
SNRPA1-214ENST00000560987 TNK2Q07912 1038 aa9.49□□□□□ -0.89
SNRPA1-214ENST00000560987 GOLGA8FQ08AF8 430 aa9.49□□□□□ -0.89
SNRPA1-214ENST00000560987 GOLGA8DPQ0D2H9 430 aa9.49□□□□□ -0.89
SNRPA1-214ENST00000560987 FCHO2Q0JRZ9 810 aa9.49□□□□□ -0.89
SNRPA1-214ENST00000560987 ZNF268Q14587 947 aaPredicted RBP9.49□□□□□ -0.89
SNRPA1-214ENST00000560987 MTF1Q14872 753 aa9.49□□□□□ -0.89
SNRPA1-214ENST00000560987 NCAPHQ15003 741 aa9.49□□□□□ -0.89
SNRPA1-214ENST00000560987 SYCP1Q15431 976 aa9.49□□□□□ -0.89
SNRPA1-214ENST00000560987 NFKBIBQ15653 356 aa9.49□□□□□ -0.89
SNRPA1-214ENST00000560987 ITPRIPL2Q3MIP1 535 aa9.49□□□□□ -0.89
SNRPA1-214ENST00000560987 TRIM68Q6AZZ1 485 aa9.49□□□□□ -0.89
SNRPA1-214ENST00000560987 DDX42Q86XP3 938 aaKnown RBP eCLIP9.49□□□□□ -0.89
SNRPA1-214ENST00000560987 DHX40Q8IX18 779 aaKnown RBP9.49□□□□□ -0.89
SNRPA1-214ENST00000560987 RNF139Q8WU17 664 aa9.49□□□□□ -0.89
SNRPA1-214ENST00000560987 FAM3CQ92520 227 aa9.49□□□□□ -0.89
SNRPA1-214ENST00000560987 SHC3Q92529 594 aa9.49□□□□□ -0.89
SNRPA1-214ENST00000560987 GOLGA1Q92805 767 aa9.49□□□□□ -0.89
SNRPA1-214ENST00000560987 ATOH1Q92858 354 aaPredicted RBP9.49□□□□□ -0.89
SNRPA1-214ENST00000560987 DNASE1L2Q92874 299 aa9.49□□□□□ -0.89
SNRPA1-214ENST00000560987 NELL2Q99435 816 aa9.49□□□□□ -0.89
SNRPA1-214ENST00000560987 ULBP1Q9BZM6 244 aa9.49□□□□□ -0.89
SNRPA1-214ENST00000560987 MIS12Q9H081 205 aa9.49□□□□□ -0.89
SNRPA1-214ENST00000560987 LINC00597Q9H2U6 94 aa9.49□□□□□ -0.89
SNRPA1-214ENST00000560987 EBF3Q9H4W6 596 aa9.49□□□□□ -0.89
SNRPA1-214ENST00000560987 C8orf33Q9H7E9 229 aaPredicted RBP9.49□□□□□ -0.89
SNRPA1-214ENST00000560987 SIX2Q9NPC8 291 aa9.49□□□□□ -0.89
SNRPA1-214ENST00000560987 ACP6Q9NPH0 428 aa9.49□□□□□ -0.89
SNRPA1-214ENST00000560987 NLRC4Q9NPP4 1024 aa9.49□□□□□ -0.89
SNRPA1-214ENST00000560987 FAM207AQ9NSI2 230 aaPredicted RBP9.49□□□□□ -0.89
SNRPA1-214ENST00000560987 CFAP97Q9P2B7 532 aa9.49□□□□□ -0.89
SNRPA1-214ENST00000560987 DNMT3LQ9UJW3 386 aa9.49□□□□□ -0.89
SNRPA1-214ENST00000560987 ARHGAP26Q9UNA1 814 aa9.49□□□□□ -0.89
SNRPA1-214ENST00000560987 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.49□□□□□ -0.89
SNRPA1-214ENST00000560987 CNTN6Q9UQ52 1028 aa9.49□□□□□ -0.89
SNRPA1-214ENST00000560987 SH3BP1Q9Y3L3 701 aa9.49□□□□□ -0.89
SNRPA1-214ENST00000560987 WNT6Q9Y6F9 365 aa9.49□□□□□ -0.89
SNRPA1-214ENST00000560987 PIAS3Q9Y6X2 628 aa9.49□□□□□ -0.89
SNRPA1-214ENST00000560987 DENND4CQ5VZ89 1909 aa9.48□□□□□ -0.89
SNRPA1-214ENST00000560987 KANSL1LA0AUZ9 987 aa9.48□□□□□ -0.89
SNRPA1-214ENST00000560987 LRRC10BA6NIK2 292 aa9.48□□□□□ -0.89
SNRPA1-214ENST00000560987 SLC9A3R1O14745 358 aaPredicted RBP9.48□□□□□ -0.89
SNRPA1-214ENST00000560987 SCAMP3O14828 347 aaKnown RBP9.48□□□□□ -0.89
SNRPA1-214ENST00000560987 PI15O43692 258 aa9.48□□□□□ -0.89
SNRPA1-214ENST00000560987 OAS1P00973 400 aaKnown RBP9.48□□□□□ -0.89
SNRPA1-214ENST00000560987 DCNP07585 359 aaKnown RBP9.48□□□□□ -0.89
SNRPA1-214ENST00000560987 HMBSP08397 361 aa9.48□□□□□ -0.89
SNRPA1-214ENST00000560987 PNMA6AP0CW24 399 aaPredicted RBP9.48□□□□□ -0.89
SNRPA1-214ENST00000560987 ATP1A3P13637 1013 aa9.48□□□□□ -0.89
SNRPA1-214ENST00000560987 GLULP15104 373 aa9.48□□□□□ -0.89
SNRPA1-214ENST00000560987 ARSAP15289 507 aa9.48□□□□□ -0.89
SNRPA1-214ENST00000560987 UCHL3P15374 230 aa9.48□□□□□ -0.89
SNRPA1-214ENST00000560987 PLA2G4AP47712 749 aa9.48□□□□□ -0.89
SNRPA1-214ENST00000560987 SOX9P48436 509 aa9.48□□□□□ -0.89
SNRPA1-214ENST00000560987 PGFP49763 221 aa9.48□□□□□ -0.89
SNRPA1-214ENST00000560987 KLK7P49862 253 aa9.48□□□□□ -0.89
SNRPA1-214ENST00000560987 STARD6P59095 220 aa9.48□□□□□ -0.89
SNRPA1-214ENST00000560987 SLC7A9P82251 487 aa9.48□□□□□ -0.89
SNRPA1-214ENST00000560987 AMPD2Q01433 879 aa9.48□□□□□ -0.89
SNRPA1-214ENST00000560987 ADIGQ0VDE8 80 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms