RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 PRDM12Q9H4Q4 367 aa10.94□□□□□ -0.66
TPM1-221ENST00000559831 COMMD8Q9NX08 183 aa10.94□□□□□ -0.66
TPM1-221ENST00000559831 GMIPQ9P107 970 aa10.94□□□□□ -0.66
TPM1-221ENST00000559831 SCML2Q9UQR0 700 aa10.94□□□□□ -0.66
TPM1-221ENST00000559831 USP3Q9Y6I4 520 aa10.94□□□□□ -0.66
TPM1-221ENST00000559831 CAPN6Q9Y6Q1 641 aa10.94□□□□□ -0.66
TPM1-221ENST00000559831 A0A1W2PQH9 124 aa10.93□□□□□ -0.66
TPM1-221ENST00000559831 GRID2IPA4D2P6 1211 aa10.93□□□□□ -0.66
TPM1-221ENST00000559831 TMEM191CA6NGB0 347 aa10.93□□□□□ -0.66
TPM1-221ENST00000559831 MYO1FO00160 1098 aa10.93□□□□□ -0.66
TPM1-221ENST00000559831 SOX1O00570 391 aaPredicted RBP10.93□□□□□ -0.66
TPM1-221ENST00000559831 CAPN9O14815 690 aa10.93□□□□□ -0.66
TPM1-221ENST00000559831 BUB1BO60566 1050 aaPredicted RBP10.93□□□□□ -0.66
TPM1-221ENST00000559831 RFPL2O75678 378 aa10.93□□□□□ -0.66
TPM1-221ENST00000559831 LTFP02788 710 aa10.93□□□□□ -0.66
TPM1-221ENST00000559831 PDGFRAP16234 1089 aa10.93□□□□□ -0.66
TPM1-221ENST00000559831 PSMA2P25787 234 aa10.93□□□□□ -0.66
TPM1-221ENST00000559831 RFC1P35251 1148 aaPredicted RBP10.93□□□□□ -0.66
TPM1-221ENST00000559831 GTF2F1P35269 517 aaKnown RBP eCLIP10.93□□□□□ -0.66
TPM1-221ENST00000559831 FLT3P36888 993 aa10.93□□□□□ -0.66
TPM1-221ENST00000559831 SCNN1AP37088 669 aa10.93□□□□□ -0.66
TPM1-221ENST00000559831 GNG11P61952 73 aa10.93□□□□□ -0.66
TPM1-221ENST00000559831 YWHAGP61981 247 aaKnown RBP eCLIP10.93□□□□□ -0.66
TPM1-221ENST00000559831 YWHAZP63104 245 aaKnown RBP10.93□□□□□ -0.66
TPM1-221ENST00000559831 RBM10P98175 930 aaKnown RBP10.93□□□□□ -0.66
TPM1-221ENST00000559831 OGDHQ02218 1023 aa10.93□□□□□ -0.66
TPM1-221ENST00000559831 TAF10Q12962 218 aa10.93□□□□□ -0.66
TPM1-221ENST00000559831 ZNF697Q5TEC3 545 aa10.93□□□□□ -0.66
TPM1-221ENST00000559831 BTBD8Q5XKL5 378 aa10.93□□□□□ -0.66
TPM1-221ENST00000559831 PM20D1Q6GTS8 502 aa10.93□□□□□ -0.66
TPM1-221ENST00000559831 ELMSAN1Q6PJG2 1045 aa10.93□□□□□ -0.66
TPM1-221ENST00000559831 DAAM2Q86T65 1068 aa10.93□□□□□ -0.66
TPM1-221ENST00000559831 DEFB106AQ8N104 65 aa10.93□□□□□ -0.66
TPM1-221ENST00000559831 SCML4Q8N228 414 aa10.93□□□□□ -0.66
TPM1-221ENST00000559831 SLC35F6Q8N357 371 aa10.93□□□□□ -0.66
TPM1-221ENST00000559831 RXFP2Q8WXD0 754 aa10.93□□□□□ -0.66
TPM1-221ENST00000559831 EDEM1Q92611 657 aa10.93□□□□□ -0.66
TPM1-221ENST00000559831 KHSRPQ92945 711 aaKnown RBP eCLIP10.93□□□□□ -0.66
TPM1-221ENST00000559831 CEP295NLQ96MC4 621 aa10.93□□□□□ -0.66
TPM1-221ENST00000559831 SLITRK1Q96PX8 696 aa10.93□□□□□ -0.66
TPM1-221ENST00000559831 TTYH1Q9H313 450 aaPredicted RBP10.93□□□□□ -0.66
TPM1-221ENST00000559831 GOLPH3Q9H4A6 298 aa10.93□□□□□ -0.66
TPM1-221ENST00000559831 PLEKHA4Q9H4M7 779 aa10.93□□□□□ -0.66
TPM1-221ENST00000559831 NSUN3Q9H649 340 aaKnown RBP10.93□□□□□ -0.66
TPM1-221ENST00000559831 ASNSD1Q9NWL6 643 aa10.93□□□□□ -0.66
TPM1-221ENST00000559831 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.93□□□□□ -0.66
TPM1-221ENST00000559831 EHD2Q9NZN4 543 aa10.93□□□□□ -0.66
TPM1-221ENST00000559831 IP6K2Q9UHH9 426 aa10.93□□□□□ -0.66
TPM1-221ENST00000559831 TMEM59LQ9UK28 342 aa10.93□□□□□ -0.66
TPM1-221ENST00000559831 USTQ9Y2C2 406 aa10.93□□□□□ -0.66
TPM1-221ENST00000559831 HYOU1Q9Y4L1 999 aa10.93□□□□□ -0.66
TPM1-221ENST00000559831 HCFC2Q9Y5Z7 792 aa10.93□□□□□ -0.66
TPM1-221ENST00000559831 C2orf16Q68DN1 1984 aa10.93□□□□□ -0.66
TPM1-221ENST00000559831 TMEM265A0A087WTH1 108 aa10.92□□□□□ -0.66
TPM1-221ENST00000559831 C2CD4BA6NLJ0 364 aa10.92□□□□□ -0.66
TPM1-221ENST00000559831 ZMYND10O75800 440 aa10.92□□□□□ -0.66
TPM1-221ENST00000559831 FTCDO95954 541 aa10.92□□□□□ -0.66
TPM1-221ENST00000559831 GLI1P08151 1106 aa10.92□□□□□ -0.66
TPM1-221ENST00000559831 NCAM1P13591 858 aa10.92□□□□□ -0.66
TPM1-221ENST00000559831 TNNT1P13805 278 aa10.92□□□□□ -0.66
TPM1-221ENST00000559831 HMGA1P17096 107 aaKnown RBP10.92□□□□□ -0.66
TPM1-221ENST00000559831 SDC4P31431 198 aa10.92□□□□□ -0.66
TPM1-221ENST00000559831 SSR1P43307 286 aaKnown RBP10.92□□□□□ -0.66
TPM1-221ENST00000559831 SULT1E1P49888 294 aa10.92□□□□□ -0.66
TPM1-221ENST00000559831 HADHBP55084 474 aaKnown RBP10.92□□□□□ -0.66
TPM1-221ENST00000559831 ATP11AP98196 1134 aa10.92□□□□□ -0.66
TPM1-221ENST00000559831 GRIN2CQ14957 1233 aa10.92□□□□□ -0.66
TPM1-221ENST00000559831 CDO1Q16878 200 aa10.92□□□□□ -0.66
TPM1-221ENST00000559831 DCAF6Q58WW2 860 aa10.92□□□□□ -0.66
TPM1-221ENST00000559831 TCEAL5Q5H9L2 206 aa10.92□□□□□ -0.66
TPM1-221ENST00000559831 BSPRYQ5W0U4 402 aa10.92□□□□□ -0.66
TPM1-221ENST00000559831 TRNP1Q6NT89 227 aa10.92□□□□□ -0.66
TPM1-221ENST00000559831 BHLHA9Q7RTU4 235 aa10.92□□□□□ -0.66
TPM1-221ENST00000559831 DNAJB7Q7Z6W7 309 aaPredicted RBP10.92□□□□□ -0.66
TPM1-221ENST00000559831 SCD5Q86SK9 330 aa10.92□□□□□ -0.66
TPM1-221ENST00000559831 CPNE8Q86YQ8 564 aa10.92□□□□□ -0.66
TPM1-221ENST00000559831 ARHGAP18Q8N392 663 aa10.92□□□□□ -0.66
TPM1-221ENST00000559831 TRIM58Q8NG06 486 aa10.92□□□□□ -0.66
TPM1-221ENST00000559831 PSMG2Q969U7 264 aa10.92□□□□□ -0.66
TPM1-221ENST00000559831 LRCH3Q96II8 777 aa10.92□□□□□ -0.66
TPM1-221ENST00000559831 CALR3Q96L12 384 aaKnown RBP10.92□□□□□ -0.66
TPM1-221ENST00000559831 ZNF512Q96ME7 567 aaPredicted RBP10.92□□□□□ -0.66
TPM1-221ENST00000559831 CFAP57Q96MR6 1250 aa10.92□□□□□ -0.66
TPM1-221ENST00000559831 FAM161BQ96MY7 647 aa10.92□□□□□ -0.66
TPM1-221ENST00000559831 CDCA3Q99618 268 aaPredicted RBP10.92□□□□□ -0.66
TPM1-221ENST00000559831 TTLL2Q9BWV7 592 aa10.92□□□□□ -0.66
TPM1-221ENST00000559831 POPDC2Q9HBU9 364 aa10.92□□□□□ -0.66
TPM1-221ENST00000559831 ZNF334Q9HCZ1 680 aaPredicted RBP10.92□□□□□ -0.66
TPM1-221ENST00000559831 TLR8Q9NR97 1041 aaKnown RBP10.92□□□□□ -0.66
TPM1-221ENST00000559831 IL37Q9NZH6 218 aa10.92□□□□□ -0.66
TPM1-221ENST00000559831 DPP7Q9UHL4 492 aa10.92□□□□□ -0.66
TPM1-221ENST00000559831 NAALADL1Q9UQQ1 740 aa10.92□□□□□ -0.66
TPM1-221ENST00000559831 ASB3Q9Y575 518 aa10.92□□□□□ -0.66
TPM1-221ENST00000559831 PRRC2BQ5JSZ5 2229 aaKnown RBP10.91□□□□□ -0.66
TPM1-221ENST00000559831 SYNJ2BP-COX16A0A087WUM0 186 aa10.91□□□□□ -0.66
TPM1-221ENST00000559831 SPOPO43791 374 aa10.91□□□□□ -0.66
TPM1-221ENST00000559831 PROSCO94903 275 aa10.91□□□□□ -0.66
TPM1-221ENST00000559831 C1RP00736 705 aa10.91□□□□□ -0.66
TPM1-221ENST00000559831 DESP17661 470 aa10.91□□□□□ -0.66
TPM1-221ENST00000559831 IGFBP4P22692 258 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms