RNA–Protein interactions for RNA: ENST00000559340.1

LDLR-210, Transcript of low density lipoprotein receptor, humanhuman

TSL 5

Gene LDLR, Length 605 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-210ENST00000559340 OLA1Q9NTK5 396 aaKnown RBP9.7□□□□□ -0.86
LDLR-210ENST00000559340 ASNSD1Q9NWL6 643 aa9.7□□□□□ -0.86
LDLR-210ENST00000559340 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.7□□□□□ -0.86
LDLR-210ENST00000559340 DNMT3BQ9UBC3 853 aaKnown RBP9.7□□□□□ -0.86
LDLR-210ENST00000559340 NAGPAQ9UK23 515 aa9.7□□□□□ -0.86
LDLR-210ENST00000559340 NUP210Q8TEM1 1887 aaPredicted RBP9.7□□□□□ -0.86
LDLR-210ENST00000559340 E5RJQ4 531 aa9.69□□□□□ -0.86
LDLR-210ENST00000559340 TULP2O00295 520 aa9.69□□□□□ -0.86
LDLR-210ENST00000559340 CAPN9O14815 690 aa9.69□□□□□ -0.86
LDLR-210ENST00000559340 ABL1P00519 1130 aa9.69□□□□□ -0.86
LDLR-210ENST00000559340 F11P03951 625 aa9.69□□□□□ -0.86
LDLR-210ENST00000559340 CFHP08603 1231 aa9.69□□□□□ -0.86
LDLR-210ENST00000559340 H2AFZP0C0S5 128 aa9.69□□□□□ -0.86
LDLR-210ENST00000559340 USP17L7P0C7H9 530 aa9.69□□□□□ -0.86
LDLR-210ENST00000559340 HELZP42694 1942 aaKnown RBP9.69□□□□□ -0.86
LDLR-210ENST00000559340 TUBP50607 506 aa9.69□□□□□ -0.86
LDLR-210ENST00000559340 DAOAP59103 153 aa9.69□□□□□ -0.86
LDLR-210ENST00000559340 KRT83P78385 493 aa9.69□□□□□ -0.86
LDLR-210ENST00000559340 SLC6A3Q01959 620 aa9.69□□□□□ -0.86
LDLR-210ENST00000559340 MTMR3Q13615 1198 aa9.69□□□□□ -0.86
LDLR-210ENST00000559340 HECTD3Q5T447 861 aa9.69□□□□□ -0.86
LDLR-210ENST00000559340 SNX30Q5VWJ9 437 aa9.69□□□□□ -0.86
LDLR-210ENST00000559340 H2AFVQ71UI9 128 aa9.69□□□□□ -0.86
LDLR-210ENST00000559340 BEND5Q7L4P6 421 aa9.69□□□□□ -0.86
LDLR-210ENST00000559340 OTOP3Q7RTS5 596 aa9.69□□□□□ -0.86
LDLR-210ENST00000559340 SCUBE3Q8IX30 993 aa9.69□□□□□ -0.86
LDLR-210ENST00000559340 MCOLN2Q8IZK6 566 aa9.69□□□□□ -0.86
LDLR-210ENST00000559340 HS6ST3Q8IZP7 471 aa9.69□□□□□ -0.86
LDLR-210ENST00000559340 SMRP1Q8NCR6 262 aa9.69□□□□□ -0.86
LDLR-210ENST00000559340 RNF139Q8WU17 664 aa9.69□□□□□ -0.86
LDLR-210ENST00000559340 ACSF2Q96CM8 615 aaPredicted RBP9.69□□□□□ -0.86
LDLR-210ENST00000559340 PDLIM2Q96JY6 352 aa9.69□□□□□ -0.86
LDLR-210ENST00000559340 CPXM1Q96SM3 734 aa9.69□□□□□ -0.86
LDLR-210ENST00000559340 SELENOOQ9BVL4 669 aa9.69□□□□□ -0.86
LDLR-210ENST00000559340 APOL5Q9BWW9 433 aa9.69□□□□□ -0.86
LDLR-210ENST00000559340 NACA2Q9H009 215 aa9.69□□□□□ -0.86
LDLR-210ENST00000559340 ISCUQ9H1K1 167 aa9.69□□□□□ -0.86
LDLR-210ENST00000559340 ABCC13Q9NSE7 274 aa9.69□□□□□ -0.86
LDLR-210ENST00000559340 TMEM30AQ9NV96 361 aa9.69□□□□□ -0.86
LDLR-210ENST00000559340 RRN3Q9NYV6 651 aa9.69□□□□□ -0.86
LDLR-210ENST00000559340 CLIC5Q9NZA1 410 aa9.69□□□□□ -0.86
LDLR-210ENST00000559340 CHORDC1Q9UHD1 332 aaPredicted RBP9.69□□□□□ -0.86
LDLR-210ENST00000559340 INTUQ9ULD6 942 aa9.69□□□□□ -0.86
LDLR-210ENST00000559340 EPN1Q9Y6I3 576 aaPredicted RBP9.69□□□□□ -0.86
LDLR-210ENST00000559340 SCINQ9Y6U3 715 aa9.69□□□□□ -0.86
LDLR-210ENST00000559340 SPTBN5Q9NRC6 3674 aaKnown RBP9.69□□□□□ -0.86
LDLR-210ENST00000559340 DENND4AQ7Z401 1863 aa9.68□□□□□ -0.86
LDLR-210ENST00000559340 A0A087X0T9 212 aa9.68□□□□□ -0.86
LDLR-210ENST00000559340 TRAV19A0A0A6YYK7 116 aa9.68□□□□□ -0.86
LDLR-210ENST00000559340 ZNF840PA6NDX5 716 aa9.68□□□□□ -0.86
LDLR-210ENST00000559340 TMCO5BA8MYB1 307 aa9.68□□□□□ -0.86
LDLR-210ENST00000559340 EIF3CLB5ME19 914 aaKnown RBP9.68□□□□□ -0.86
LDLR-210ENST00000559340 H3BQ06 376 aaPredicted RBP9.68□□□□□ -0.86
LDLR-210ENST00000559340 ARHGAP6O43182 974 aa9.68□□□□□ -0.86
LDLR-210ENST00000559340 MBTPS2O43462 519 aa9.68□□□□□ -0.86
LDLR-210ENST00000559340 HSF2BPO75031 334 aa9.68□□□□□ -0.86
LDLR-210ENST00000559340 LTFP02788 710 aa9.68□□□□□ -0.86
LDLR-210ENST00000559340 PLEKP08567 350 aaPredicted RBP9.68□□□□□ -0.86
LDLR-210ENST00000559340 ZDHHC11BP0C7U3 371 aa9.68□□□□□ -0.86
LDLR-210ENST00000559340 FAM228BP0C875 321 aa9.68□□□□□ -0.86
LDLR-210ENST00000559340 MAGEA1P43355 309 aa9.68□□□□□ -0.86
LDLR-210ENST00000559340 KPNA1P52294 538 aaPredicted RBP9.68□□□□□ -0.86
LDLR-210ENST00000559340 GSCP56915 257 aaPredicted RBP9.68□□□□□ -0.86
LDLR-210ENST00000559340 YWHAGP61981 247 aaKnown RBP eCLIP9.68□□□□□ -0.86
LDLR-210ENST00000559340 USP46P62068 366 aa9.68□□□□□ -0.86
LDLR-210ENST00000559340 YWHAZP63104 245 aaKnown RBP9.68□□□□□ -0.86
LDLR-210ENST00000559340 GPC5P78333 572 aa9.68□□□□□ -0.86
LDLR-210ENST00000559340 DLX2Q07687 328 aaPredicted RBP9.68□□□□□ -0.86
LDLR-210ENST00000559340 CBX2Q14781 532 aaPredicted RBP9.68□□□□□ -0.86
LDLR-210ENST00000559340 ASTE1Q2TB18 679 aaPredicted RBP9.68□□□□□ -0.86
LDLR-210ENST00000559340 PTPN20Q4JDL3 420 aa9.68□□□□□ -0.86
LDLR-210ENST00000559340 BSPRYQ5W0U4 402 aa9.68□□□□□ -0.86
LDLR-210ENST00000559340 MMS22LQ6ZRQ5 1243 aa9.68□□□□□ -0.86
LDLR-210ENST00000559340 RSRC2Q7L4I2 434 aaKnown RBP9.68□□□□□ -0.86
LDLR-210ENST00000559340 ARCQ7LC44 396 aa9.68□□□□□ -0.86
LDLR-210ENST00000559340 GPRIN1Q7Z2K8 1008 aa9.68□□□□□ -0.86
LDLR-210ENST00000559340 TMC8Q8IU68 726 aa9.68□□□□□ -0.86
LDLR-210ENST00000559340 LRRC8AQ8IWT6 810 aa9.68□□□□□ -0.86
LDLR-210ENST00000559340 PLCD3Q8N3E9 789 aa9.68□□□□□ -0.86
LDLR-210ENST00000559340 CTNNBL1Q8WYA6 563 aaPredicted RBP9.68□□□□□ -0.86
LDLR-210ENST00000559340 E2F7Q96AV8 911 aa9.68□□□□□ -0.86
LDLR-210ENST00000559340 FAM149B1Q96BN6 582 aa9.68□□□□□ -0.86
LDLR-210ENST00000559340 MCRS1Q96EZ8 462 aa9.68□□□□□ -0.86
LDLR-210ENST00000559340 CALR3Q96L12 384 aaKnown RBP9.68□□□□□ -0.86
LDLR-210ENST00000559340 EIF3CQ99613 913 aaKnown RBP9.68□□□□□ -0.86
LDLR-210ENST00000559340 NCAPGQ9BPX3 1015 aa9.68□□□□□ -0.86
LDLR-210ENST00000559340 C11orf70Q9BRQ4 267 aa9.68□□□□□ -0.86
LDLR-210ENST00000559340 C1QTNF1Q9BXJ1 281 aa9.68□□□□□ -0.86
LDLR-210ENST00000559340 LRRC3Q9BY71 257 aa9.68□□□□□ -0.86
LDLR-210ENST00000559340 SLITRK6Q9H5Y7 841 aa9.68□□□□□ -0.86
LDLR-210ENST00000559340 TASP1Q9H6P5 420 aa9.68□□□□□ -0.86
LDLR-210ENST00000559340 IL21Q9HBE4 155 aa9.68□□□□□ -0.86
LDLR-210ENST00000559340 PARVAQ9NVD7 372 aa9.68□□□□□ -0.86
LDLR-210ENST00000559340 HCFC1R1Q9NWW0 138 aa9.68□□□□□ -0.86
LDLR-210ENST00000559340 GDE1Q9NZC3 331 aa9.68□□□□□ -0.86
LDLR-210ENST00000559340 GMIPQ9P107 970 aa9.68□□□□□ -0.86
LDLR-210ENST00000559340 CYTH4Q9UIA0 394 aa9.68□□□□□ -0.86
LDLR-210ENST00000559340 LCMT1Q9UIC8 334 aa9.68□□□□□ -0.86
LDLR-210ENST00000559340 NR2E1Q9Y466 385 aa9.68□□□□□ -0.86
LDLR-210ENST00000559340 USP15Q9Y4E8 981 aaPredicted RBP9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms