RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 PEX12O00623 359 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 SPTLC2O15270 562 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 SEPT4O43236 478 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 NUAK1O60285 661 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 TSPAN3O60637 253 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 TAF5LO75529 589 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 TIPRLO75663 272 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 RPP40O75818 363 aaKnown RBP2.58□□□□□ -2
GABPB1-209ENST00000559100 SUN1O94901 812 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 INHBBP09529 407 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 C1QTNF9P0C862 333 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 ARP10275 920 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 KCNA2P16389 499 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 DRD1P21728 446 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 FGFR4P22455 802 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 GCSHP23434 173 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 PPIFP30405 207 aaKnown RBP2.58□□□□□ -2
GABPB1-209ENST00000559100 UQCRC1P31930 480 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 APOBEC3AP31941 199 aaPredicted RBP2.58□□□□□ -2
GABPB1-209ENST00000559100 PGM1P36871 562 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 PAFAH1B1P43034 410 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 MAGEA10P43363 369 aaPredicted RBP2.58□□□□□ -2
GABPB1-209ENST00000559100 KCNC1P48547 511 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 PDE6CP51160 858 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 CCR5P51681 352 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 SLURP1P55000 103 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 KRTAP10-2P60368 255 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 ARF3P61204 181 aaPredicted RBP2.58□□□□□ -2
GABPB1-209ENST00000559100 PPP2CBP62714 309 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 PPP2CAP67775 309 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 ARF1P84077 181 aaKnown RBP2.58□□□□□ -2
GABPB1-209ENST00000559100 CHRNDQ07001 517 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 TCF15Q12870 199 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 CRHR2Q13324 411 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 TUBB3Q13509 450 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 KCNA10Q16322 511 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 SPDYE7PQ495Y7 208 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 GALNTL6Q49A17 601 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 CTXN3Q4LDR2 81 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 GPATCH4Q5T3I0 446 aaKnown RBP2.58□□□□□ -2
GABPB1-209ENST00000559100 SLC9C2Q5TAH2 1124 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 NT5DC1Q5TFE4 455 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 ICE2Q659A1 982 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 TTLL5Q6EMB2 1281 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 FASTKD5Q7L8L6 764 aaKnown RBP2.58□□□□□ -2
GABPB1-209ENST00000559100 GPRIN1Q7Z2K8 1008 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 CHD1LQ86WJ1 897 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 SYT12Q8IV01 421 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 P3H2Q8IVL5 708 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 ZFPM1Q8IX07 1006 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 RHOT2Q8IXI1 618 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 FAM9BQ8IZU0 186 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 ANKRD35Q8N283 1001 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 TSPYL6Q8N831 410 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 FSIP1Q8NA03 581 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 MDGA1Q8NFP4 955 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 POC1BQ8TC44 478 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 UBE2Q2Q8WVN8 375 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 DACT3Q96B18 629 aaPredicted RBP2.58□□□□□ -2
GABPB1-209ENST00000559100 MIEF2Q96C03 454 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 SDCCAG3Q96C92 435 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 TOX2Q96NM4 488 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 MPHOSPH9Q99550 1183 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 REEP2Q9BRK0 252 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 CHCHD6Q9BRQ6 235 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 GPR87Q9BY21 358 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 TRIM5Q9C035 493 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 RMI1Q9H9A7 625 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 SEC61A2Q9H9S3 476 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 FSCN3Q9NQT6 498 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 FBXO28Q9NVF7 368 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 TRPM5Q9NZQ8 1165 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 HSFX1Q9UBD0 423 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 PI4KBQ9UBF8 816 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 HECAQ9UBI9 543 aaPredicted RBP2.58□□□□□ -2
GABPB1-209ENST00000559100 RGS17Q9UGC6 210 aaPredicted RBP2.58□□□□□ -2
GABPB1-209ENST00000559100 POLG2Q9UHN1 485 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 CCNL1Q9UK58 526 aaPredicted RBP2.58□□□□□ -2
GABPB1-209ENST00000559100 TBX20Q9UMR3 447 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 SUFUQ9UMX1 484 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 SLC27A6Q9Y2P4 619 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 NOX1Q9Y5S8 564 aa2.58□□□□□ -2
GABPB1-209ENST00000559100 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP2.58□□□□□ -2
GABPB1-209ENST00000559100 TBC1D3DA0A087WVF3 549 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 TBC1D3IA0A087WXS9 549 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 TBC1D3EA0A087X179 549 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 TBC1D3KA0A087X1G2 549 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 MYADML2A6NDP7 307 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 TBC1D3BA6NDS4 549 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 NPEPPSL1A6NEC2 478 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 TBC1D3FA6NER0 549 aaPredicted RBP2.57□□□□□ -2
GABPB1-209ENST00000559100 GOLGA6L6A8MZA4 724 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 TBC1D3LB9A6J9 549 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 NPIPB6E9PJ23 425 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 LEFTY2O00292 366 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 EXOC5O00471 708 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 TSPAN4O14817 238 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 LAMTOR5O43504 91 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 RPS6KA4O75676 772 aa2.57□□□□□ -2
GABPB1-209ENST00000559100 RECQL4O94761 1208 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms