RNA–Protein interactions for RNA: ENST00000557673.5

NEK9-211, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-211ENST00000557673 MAPRE1Q15691 268 aaKnown RBP17.64■□□□□ 0.41
NEK9-211ENST00000557673 TPD52L1Q16890 204 aaPredicted RBP17.64■□□□□ 0.41
NEK9-211ENST00000557673 ANO6Q4KMQ2 910 aa17.64■□□□□ 0.41
NEK9-211ENST00000557673 TCERG1LQ5VWI1 586 aa17.64■□□□□ 0.41
NEK9-211ENST00000557673 PSAPL1Q6NUJ1 521 aa17.64■□□□□ 0.41
NEK9-211ENST00000557673 FAM171BQ6P995 826 aa17.64■□□□□ 0.41
NEK9-211ENST00000557673 SCN4BQ8IWT1 228 aa17.64■□□□□ 0.41
NEK9-211ENST00000557673 ENOX1Q8TC92 643 aaKnown RBP17.64■□□□□ 0.41
NEK9-211ENST00000557673 SH3RF2Q8TEC5 729 aa17.64■□□□□ 0.41
NEK9-211ENST00000557673 ELMO3Q96BJ8 720 aa17.64■□□□□ 0.41
NEK9-211ENST00000557673 MMRN2Q9H8L6 949 aa17.64■□□□□ 0.41
NEK9-211ENST00000557673 POLR3BQ9NW08 1133 aaPredicted RBP17.64■□□□□ 0.41
NEK9-211ENST00000557673 NXF1Q9UBU9 619 aaKnown RBP17.64■□□□□ 0.41
NEK9-211ENST00000557673 CDH9Q9ULB4 789 aa17.64■□□□□ 0.41
NEK9-211ENST00000557673 ARHGAP26Q9UNA1 814 aa17.64■□□□□ 0.41
NEK9-211ENST00000557673 NFE2L3Q9Y4A8 694 aa17.64■□□□□ 0.41
NEK9-211ENST00000557673 CHD6Q8TD26 2715 aa17.64■□□□□ 0.41
NEK9-211ENST00000557673 DENND4CQ5VZ89 1909 aa17.64■□□□□ 0.41
NEK9-211ENST00000557673 CEP295Q9C0D2 2601 aa17.64■□□□□ 0.41
NEK9-211ENST00000557673 CACNA1GO43497 2377 aa17.64■□□□□ 0.41
NEK9-211ENST00000557673 ATG2BQ96BY7 2078 aa17.63■□□□□ 0.41
NEK9-211ENST00000557673 KHNYNO15037 678 aaKnown RBP17.63■□□□□ 0.41
NEK9-211ENST00000557673 DCLK1O15075 740 aa17.63■□□□□ 0.41
NEK9-211ENST00000557673 CLSTN1O94985 981 aa17.63■□□□□ 0.41
NEK9-211ENST00000557673 NOVA1P51513 510 aaKnown RBP17.63■□□□□ 0.41
NEK9-211ENST00000557673 MYL5Q02045 173 aa17.63■□□□□ 0.41
NEK9-211ENST00000557673 CBWD6Q4V339 395 aa17.63■□□□□ 0.41
NEK9-211ENST00000557673 CBWD3Q5JTY5 395 aa17.63■□□□□ 0.41
NEK9-211ENST00000557673 CBWD5Q5RIA9 395 aa17.63■□□□□ 0.41
NEK9-211ENST00000557673 NAIF1Q69YI7 327 aaPredicted RBP17.63■□□□□ 0.41
NEK9-211ENST00000557673 TCEAL6Q6IPX3 200 aa17.63■□□□□ 0.41
NEK9-211ENST00000557673 VSTM1Q6UX27 236 aa17.63■□□□□ 0.41
NEK9-211ENST00000557673 KIAA1958Q8N8K9 716 aa17.63■□□□□ 0.41
NEK9-211ENST00000557673 ARL14EPQ8N8R7 260 aaPredicted RBP17.63■□□□□ 0.41
NEK9-211ENST00000557673 TCEAL3Q969E4 200 aa17.63■□□□□ 0.41
NEK9-211ENST00000557673 SPATA17Q96L03 361 aa17.63■□□□□ 0.41
NEK9-211ENST00000557673 SLC22A12Q96S37 553 aa17.63■□□□□ 0.41
NEK9-211ENST00000557673 SNX25Q9H3E2 840 aa17.63■□□□□ 0.41
NEK9-211ENST00000557673 VRTNQ9H8Y1 702 aa17.63■□□□□ 0.41
NEK9-211ENST00000557673 GCNT4Q9P109 453 aa17.63■□□□□ 0.41
NEK9-211ENST00000557673 MAGEC2Q9UBF1 373 aaPredicted RBP17.63■□□□□ 0.41
NEK9-211ENST00000557673 PTPRDP23468 1912 aa17.62■□□□□ 0.41
NEK9-211ENST00000557673 C4orf47A7E2U8 309 aa17.62■□□□□ 0.41
NEK9-211ENST00000557673 TACC1O75410 805 aa17.62■□□□□ 0.41
NEK9-211ENST00000557673 HLA-DRAP01903 254 aa17.62■□□□□ 0.41
NEK9-211ENST00000557673 ATICP31939 592 aa17.62■□□□□ 0.41
NEK9-211ENST00000557673 GNL1P36915 607 aaPredicted RBP17.62■□□□□ 0.41
NEK9-211ENST00000557673 PPP3CCP48454 512 aa17.62■□□□□ 0.41
NEK9-211ENST00000557673 CYP27A1Q02318 531 aa17.62■□□□□ 0.41
NEK9-211ENST00000557673 ZNF699Q32M78 642 aa17.62■□□□□ 0.41
NEK9-211ENST00000557673 MDH1BQ5I0G3 518 aa17.62■□□□□ 0.41
NEK9-211ENST00000557673 KRT39Q6A163 491 aa17.62■□□□□ 0.41
NEK9-211ENST00000557673 FAM114A1Q8IWE2 563 aa17.62■□□□□ 0.41
NEK9-211ENST00000557673 OR6B3Q8NGW1 331 aa17.62■□□□□ 0.41
NEK9-211ENST00000557673 TAS1R2Q8TE23 839 aa17.62■□□□□ 0.41
NEK9-211ENST00000557673 BPIFA3Q9BQP9 254 aa17.62■□□□□ 0.41
NEK9-211ENST00000557673 DPEP3Q9H4B8 488 aa17.62■□□□□ 0.41
NEK9-211ENST00000557673 SMYD3Q9H7B4 428 aa17.62■□□□□ 0.41
NEK9-211ENST00000557673 TRPM5Q9NZQ8 1165 aa17.62■□□□□ 0.41
NEK9-211ENST00000557673 C2orf78A6NCI8 922 aa17.61■□□□□ 0.41
NEK9-211ENST00000557673 SLC9A3R1O14745 358 aaPredicted RBP17.61■□□□□ 0.41
NEK9-211ENST00000557673 ALDH1A2O94788 518 aa17.61■□□□□ 0.41
NEK9-211ENST00000557673 ASS1P00966 412 aaKnown RBP17.61■□□□□ 0.41
NEK9-211ENST00000557673 PROS1P07225 676 aa17.61■□□□□ 0.41
NEK9-211ENST00000557673 BDNFP23560 247 aa17.61■□□□□ 0.41
NEK9-211ENST00000557673 ANXA13P27216 316 aa17.61■□□□□ 0.41
NEK9-211ENST00000557673 C2orf27AQ580R0 203 aa17.61■□□□□ 0.41
NEK9-211ENST00000557673 CDKAL1Q5VV42 579 aa17.61■□□□□ 0.41
NEK9-211ENST00000557673 PMS2CLQ68D20 193 aa17.61■□□□□ 0.41
NEK9-211ENST00000557673 SCARA5Q6ZMJ2 495 aa17.61■□□□□ 0.41
NEK9-211ENST00000557673 AOPEPQ8N6M6 819 aa17.61■□□□□ 0.41
NEK9-211ENST00000557673 MYCBPAPQ8TBZ2 947 aa17.61■□□□□ 0.41
NEK9-211ENST00000557673 USP33Q8TEY7 942 aa17.61■□□□□ 0.41
NEK9-211ENST00000557673 EZH1Q92800 747 aaPredicted RBP17.61■□□□□ 0.41
NEK9-211ENST00000557673 PCED1BQ96HM7 432 aa17.61■□□□□ 0.41
NEK9-211ENST00000557673 NAT10Q9H0A0 1025 aaKnown RBP17.61■□□□□ 0.41
NEK9-211ENST00000557673 LINC00597Q9H2U6 94 aa17.61■□□□□ 0.41
NEK9-211ENST00000557673 TMEM9BQ9NQ34 198 aa17.61■□□□□ 0.41
NEK9-211ENST00000557673 SAMSN1Q9NSI8 373 aaKnown RBP17.61■□□□□ 0.41
NEK9-211ENST00000557673 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.61■□□□□ 0.41
NEK9-211ENST00000557673 CFAP47Q6ZTR5 3102 aa17.61■□□□□ 0.41
NEK9-211ENST00000557673 LNP1A1A4G5 178 aa17.6■□□□□ 0.41
NEK9-211ENST00000557673 CEACAM1P13688 526 aa17.6■□□□□ 0.41
NEK9-211ENST00000557673 GRIK1P39086 918 aa17.6■□□□□ 0.41
NEK9-211ENST00000557673 FMO5P49326 533 aa17.6■□□□□ 0.41
NEK9-211ENST00000557673 CDH8P55286 799 aa17.6■□□□□ 0.41
NEK9-211ENST00000557673 MRPS21P82921 87 aaKnown RBP17.6■□□□□ 0.41
NEK9-211ENST00000557673 NCAPHQ15003 741 aa17.6■□□□□ 0.41
NEK9-211ENST00000557673 HSP90AA4PQ58FG1 418 aa17.6■□□□□ 0.41
NEK9-211ENST00000557673 ZNF667Q5HYK9 610 aa17.6■□□□□ 0.41
NEK9-211ENST00000557673 DENND5BQ6ZUT9 1274 aa17.6■□□□□ 0.41
NEK9-211ENST00000557673 CYP2U1Q7Z449 544 aa17.6■□□□□ 0.41
NEK9-211ENST00000557673 RASSF3Q86WH2 238 aa17.6■□□□□ 0.41
NEK9-211ENST00000557673 FBXL13Q8NEE6 735 aa17.6■□□□□ 0.41
NEK9-211ENST00000557673 SDCBP2Q9H190 292 aa17.6■□□□□ 0.41
NEK9-211ENST00000557673 RALYQ9UKM9 306 aaKnown RBP17.6■□□□□ 0.41
NEK9-211ENST00000557673 MMP17Q9ULZ9 603 aa17.6■□□□□ 0.41
NEK9-211ENST00000557673 COQ4Q9Y3A0 265 aa17.6■□□□□ 0.41
NEK9-211ENST00000557673 A8MXQ7 604 aa17.59■□□□□ 0.41
NEK9-211ENST00000557673 KCNJ18B7U540 433 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms